RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 CCDC130P13994 396 aa18.13■□□□□ 0.49
CSNK1E-215ENST00000612795 CSNK1EP49674 416 aaKnown RBP18.13■□□□□ 0.49
CSNK1E-215ENST00000612795 AFF3P51826 1226 aaKnown RBP18.13■□□□□ 0.49
CSNK1E-215ENST00000612795 MAP3K7CLP57077 242 aa18.13■□□□□ 0.49
CSNK1E-215ENST00000612795 BIRC3Q13489 604 aa18.13■□□□□ 0.49
CSNK1E-215ENST00000612795 TEAD4Q15561 434 aa18.13■□□□□ 0.49
CSNK1E-215ENST00000612795 ZNF667Q5HYK9 610 aa18.13■□□□□ 0.49
CSNK1E-215ENST00000612795 DBX2Q6ZNG2 339 aa18.13■□□□□ 0.49
CSNK1E-215ENST00000612795 ACOT1Q86TX2 421 aa18.13■□□□□ 0.49
CSNK1E-215ENST00000612795 FAM124AQ86V42 546 aa18.13■□□□□ 0.49
CSNK1E-215ENST00000612795 ZMIZ2Q8NF64 920 aa18.13■□□□□ 0.49
CSNK1E-215ENST00000612795 SMOQ99835 787 aa18.13■□□□□ 0.49
CSNK1E-215ENST00000612795 AGPAT3Q9NRZ7 376 aa18.13■□□□□ 0.49
CSNK1E-215ENST00000612795 THAP10Q9P2Z0 257 aaPredicted RBP18.13■□□□□ 0.49
CSNK1E-215ENST00000612795 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.13■□□□□ 0.49
CSNK1E-215ENST00000612795 MDM4O15151 490 aa18.12■□□□□ 0.49
CSNK1E-215ENST00000612795 EIF3DO15371 548 aaKnown RBP eCLIP18.12■□□□□ 0.49
CSNK1E-215ENST00000612795 BEST1O76090 585 aa18.12■□□□□ 0.49
CSNK1E-215ENST00000612795 GRK6P43250 576 aa18.12■□□□□ 0.49
CSNK1E-215ENST00000612795 MFAP3P55082 362 aa18.12■□□□□ 0.49
CSNK1E-215ENST00000612795 CAMK2BQ13554 666 aa18.12■□□□□ 0.49
CSNK1E-215ENST00000612795 E2F5Q15329 346 aa18.12■□□□□ 0.49
CSNK1E-215ENST00000612795 GEN1Q17RS7 908 aa18.12■□□□□ 0.49
CSNK1E-215ENST00000612795 XXYLT1Q8NBI6 393 aa18.12■□□□□ 0.49
CSNK1E-215ENST00000612795 SLC2A14Q8TDB8 520 aa18.12■□□□□ 0.49
CSNK1E-215ENST00000612795 JAKMIP2Q96AA8 810 aa18.12■□□□□ 0.49
CSNK1E-215ENST00000612795 DNMT3LQ9UJW3 386 aa18.12■□□□□ 0.49
CSNK1E-215ENST00000612795 NUDT5Q9UKK9 219 aa18.12■□□□□ 0.49
CSNK1E-215ENST00000612795 SLC27A6Q9Y2P4 619 aa18.12■□□□□ 0.49
CSNK1E-215ENST00000612795 PLXNA2O75051 1894 aa18.12■□□□□ 0.49
CSNK1E-215ENST00000612795 MYLKQ15746 1914 aa18.11■□□□□ 0.49
CSNK1E-215ENST00000612795 ASH1LQ9NR48 2969 aaKnown RBP18.11■□□□□ 0.49
CSNK1E-215ENST00000612795 CLIC2O15247 247 aa18.11■□□□□ 0.49
CSNK1E-215ENST00000612795 CYP26A1O43174 497 aa18.11■□□□□ 0.49
CSNK1E-215ENST00000612795 IGLV3-19P01714 112 aa18.11■□□□□ 0.49
CSNK1E-215ENST00000612795 HLA-EP13747 358 aa18.11■□□□□ 0.49
CSNK1E-215ENST00000612795 HOXD13P35453 343 aa18.11■□□□□ 0.49
CSNK1E-215ENST00000612795 PLA2G4AP47712 749 aa18.11■□□□□ 0.49
CSNK1E-215ENST00000612795 CCT8P50990 548 aa18.11■□□□□ 0.49
CSNK1E-215ENST00000612795 CEBPZQ03701 1054 aaKnown RBP18.11■□□□□ 0.49
CSNK1E-215ENST00000612795 ORC1Q13415 861 aa18.11■□□□□ 0.49
CSNK1E-215ENST00000612795 ZNF234Q14588 700 aa18.11■□□□□ 0.49
CSNK1E-215ENST00000612795 SMAD1Q15797 465 aaKnown RBP18.11■□□□□ 0.49
CSNK1E-215ENST00000612795 KIF19Q2TAC6 998 aa18.11■□□□□ 0.49
CSNK1E-215ENST00000612795 INAVAQ3KP66 663 aa18.11■□□□□ 0.49
CSNK1E-215ENST00000612795 C10orf120Q5SQS8 335 aa18.11■□□□□ 0.49
CSNK1E-215ENST00000612795 DHRS13Q6UX07 377 aa18.11■□□□□ 0.49
CSNK1E-215ENST00000612795 Q6ZNB5 142 aa18.11■□□□□ 0.49
CSNK1E-215ENST00000612795 ANKS1BQ7Z6G8 1248 aa18.11■□□□□ 0.49
CSNK1E-215ENST00000612795 PDILTQ8N807 584 aa18.11■□□□□ 0.49
CSNK1E-215ENST00000612795 SLC39A7Q92504 469 aa18.11■□□□□ 0.49
CSNK1E-215ENST00000612795 ZNF516Q92618 1163 aa18.11■□□□□ 0.49
CSNK1E-215ENST00000612795 PCED1AQ9H1Q7 454 aa18.11■□□□□ 0.49
CSNK1E-215ENST00000612795 FAM49BQ9NUQ9 324 aa18.11■□□□□ 0.49
CSNK1E-215ENST00000612795 OSER1Q9NX31 292 aa18.11■□□□□ 0.49
CSNK1E-215ENST00000612795 FBXO10Q9UK96 956 aa18.11■□□□□ 0.49
CSNK1E-215ENST00000612795 SNX11Q9Y5W9 270 aa18.11■□□□□ 0.49
CSNK1E-215ENST00000612795 COL5A1P20908 1838 aaPredicted RBP18.11■□□□□ 0.49
CSNK1E-215ENST00000612795 A0A087X0B3 334 aa18.1■□□□□ 0.49
CSNK1E-215ENST00000612795 E9PAM4 449 aa18.1■□□□□ 0.49
CSNK1E-215ENST00000612795 EPHX1P07099 455 aa18.1■□□□□ 0.49
CSNK1E-215ENST00000612795 FAM200BP0CF97 657 aa18.1■□□□□ 0.49
CSNK1E-215ENST00000612795 RARGP13631 454 aa18.1■□□□□ 0.49
CSNK1E-215ENST00000612795 ACO1P21399 889 aaKnown RBP18.1■□□□□ 0.49
CSNK1E-215ENST00000612795 COPAP53621 1224 aa18.1■□□□□ 0.49
CSNK1E-215ENST00000612795 ARID5AQ03989 594 aa18.1■□□□□ 0.49
CSNK1E-215ENST00000612795 ENPP2Q13822 863 aa18.1■□□□□ 0.49
CSNK1E-215ENST00000612795 KLHDC10Q6PID8 442 aa18.1■□□□□ 0.49
CSNK1E-215ENST00000612795 SERPINA13PQ6UXR4 307 aa18.1■□□□□ 0.49
CSNK1E-215ENST00000612795 C1orf216Q8TAB5 229 aa18.1■□□□□ 0.49
CSNK1E-215ENST00000612795 NXPE2Q96DL1 559 aa18.1■□□□□ 0.49
CSNK1E-215ENST00000612795 CIPCQ9C0C6 399 aa18.1■□□□□ 0.49
CSNK1E-215ENST00000612795 LRRC27Q9C0I9 530 aa18.1■□□□□ 0.49
CSNK1E-215ENST00000612795 SDCBP2Q9H190 292 aa18.1■□□□□ 0.49
CSNK1E-215ENST00000612795 TNMDQ9H2S6 317 aa18.1■□□□□ 0.49
CSNK1E-215ENST00000612795 VRTNQ9H8Y1 702 aa18.1■□□□□ 0.49
CSNK1E-215ENST00000612795 CSNK1G1Q9HCP0 422 aa18.1■□□□□ 0.49
CSNK1E-215ENST00000612795 FTSJ1Q9UET6 329 aa18.1■□□□□ 0.49
CSNK1E-215ENST00000612795 SCML2Q9UQR0 700 aa18.1■□□□□ 0.49
CSNK1E-215ENST00000612795 KNTC1P50748 2209 aa18.1■□□□□ 0.49
CSNK1E-215ENST00000612795 UBE4BO95155 1302 aa18.09■□□□□ 0.49
CSNK1E-215ENST00000612795 A0A1W2PQH9 124 aa18.09■□□□□ 0.49
CSNK1E-215ENST00000612795 TK2O00142 265 aa18.09■□□□□ 0.49
CSNK1E-215ENST00000612795 PLK4O00444 970 aa18.09■□□□□ 0.49
CSNK1E-215ENST00000612795 TGFB1I1O43294 461 aa18.09■□□□□ 0.49
CSNK1E-215ENST00000612795 STC2O76061 302 aa18.09■□□□□ 0.49
CSNK1E-215ENST00000612795 PENKP01210 267 aaPredicted RBP18.09■□□□□ 0.49
CSNK1E-215ENST00000612795 P4HA1P13674 534 aa18.09■□□□□ 0.49
CSNK1E-215ENST00000612795 TRIM21P19474 475 aaKnown RBP18.09■□□□□ 0.49
CSNK1E-215ENST00000612795 PRKCHP24723 683 aa18.09■□□□□ 0.49
CSNK1E-215ENST00000612795 ADORA2BP29275 332 aa18.09■□□□□ 0.49
CSNK1E-215ENST00000612795 CHKAP35790 457 aa18.09■□□□□ 0.49
CSNK1E-215ENST00000612795 GRIA4P48058 902 aa18.09■□□□□ 0.49
CSNK1E-215ENST00000612795 ASIC1P78348 528 aa18.09■□□□□ 0.49
CSNK1E-215ENST00000612795 EIF4HQ15056 248 aaKnown RBP18.09■□□□□ 0.49
CSNK1E-215ENST00000612795 PTPRNQ16849 979 aa18.09■□□□□ 0.49
CSNK1E-215ENST00000612795 FAM26FQ5R3K3 315 aa18.09■□□□□ 0.49
CSNK1E-215ENST00000612795 FYB2Q5VWT5 728 aa18.09■□□□□ 0.49
CSNK1E-215ENST00000612795 GPRIN1Q7Z2K8 1008 aa18.09■□□□□ 0.49
CSNK1E-215ENST00000612795 TADA2BQ86TJ2 420 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms