RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 TLK2Q86UE8 772 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 OR6P1Q8NGX9 317 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 PCDH19Q8TAB3 1148 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 USP33Q8TEY7 942 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 TMEM237Q96Q45 408 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 TRIM62Q9BVG3 475 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 TMEM120AQ9BXJ8 343 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 NXF3Q9H4D5 531 aaKnown RBP6.58□□□□□ -1.36
SNX13-213ENST00000611725 CFLARO15519 480 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 TSPAN1O60635 241 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 ANP32DO95626 131 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 CDH5P33151 784 aaPredicted RBP6.58□□□□□ -1.36
SNX13-213ENST00000611725 USP50Q70EL3 339 aaPredicted RBP6.58□□□□□ -1.36
SNX13-213ENST00000611725 COLGALT1Q8NBJ5 622 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 PPTC7Q8NI37 304 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 AGR3Q8TD06 166 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 PPP1R13LQ8WUF5 828 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 INPP5DQ92835 1189 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 RMDN2Q96LZ7 410 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 NDE1Q9NXR1 346 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 SLC17A7Q9P2U7 560 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 ANGPTL2Q9UKU9 493 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 TRDMT1O14717 391 aaKnown RBP6.58□□□□□ -1.36
SNX13-213ENST00000611725 AXLP30530 894 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 PEX19P40855 299 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 PTPN9P43378 593 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 NR2C2P49116 596 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 PCBP1Q15365 356 aaKnown RBP eCLIP6.58□□□□□ -1.36
SNX13-213ENST00000611725 ADGRD1Q6QNK2 874 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 THEM5Q8N1Q8 247 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 STKLD1Q8NE28 680 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 AGAP11Q8TF27 550 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 SCG3Q8WXD2 468 aaKnown RBP6.58□□□□□ -1.36
SNX13-213ENST00000611725 GAD1Q99259 594 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 ULBP1Q9BZM6 244 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 KRT82Q9NSB4 513 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 PIH1D1Q9NWS0 290 aaKnown RBP6.58□□□□□ -1.36
SNX13-213ENST00000611725 C17orf102A2RUQ5 167 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 MDM4O15151 490 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 NCAM2O15394 837 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 PRPF4O43172 522 aaKnown RBP eCLIP6.58□□□□□ -1.36
SNX13-213ENST00000611725 USP12O75317 370 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 SKIV2L2P42285 1042 aaKnown RBP6.58□□□□□ -1.36
SNX13-213ENST00000611725 ARPP19P56211 112 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 USP10Q14694 798 aaKnown RBP6.58□□□□□ -1.36
SNX13-213ENST00000611725 PAN2Q504Q3 1202 aaKnown RBP6.58□□□□□ -1.36
SNX13-213ENST00000611725 ANKRD20A2Q5SQ80 823 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 ANKRD20A1Q5TYW2 823 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 SMYD5Q6GMV2 418 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 LRRN4Q8WUT4 740 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 SLC44A1Q8WWI5 657 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 SSU72Q9NP77 194 aaKnown RBP6.58□□□□□ -1.36
SNX13-213ENST00000611725 SLC39A10Q9ULF5 831 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 PRRC2BQ5JSZ5 2229 aaKnown RBP6.58□□□□□ -1.36
SNX13-213ENST00000611725 MAP3K7O43318 606 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 CELF2O95319 508 aaKnown RBP6.58□□□□□ -1.36
SNX13-213ENST00000611725 GSTA2P09210 222 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 RALBP11234 206 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 MATKP42679 507 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 RASA2Q15283 850 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 ILDR2Q71H61 639 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 OLIG1Q8TAK6 271 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 DNAJC9Q8WXX5 260 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 TBC1D10AQ9BXI6 508 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 ADAM7Q9H2U9 754 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 C12orf65Q9H3J6 166 aaKnown RBP6.58□□□□□ -1.36
SNX13-213ENST00000611725 DCLRE1BQ9H816 532 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 POPDC2Q9HBU9 364 aa6.58□□□□□ -1.36
SNX13-213ENST00000611725 CPSF2Q9P2I0 782 aaKnown RBP6.58□□□□□ -1.36
SNX13-213ENST00000611725 CALB2P22676 271 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 PTPN7P35236 360 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 CPT1AP50416 773 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 ARHGAP1Q07960 439 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 CLNKQ7Z7G1 428 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 ADAM32Q8TC27 787 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 ADGRA2Q96PE1 1338 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 SHCBP1LQ9BZQ2 653 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 SDCBP2Q9H190 292 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 SAR1AQ9NR31 198 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 PAPPAQ13219 1627 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 E2F8A0AVK6 867 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 AP3B1O00203 1094 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 CNTFP26441 200 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 HIC1Q14526 733 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 RASSF3Q86WH2 238 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 C18orf25Q96B23 403 aaPredicted RBP6.57□□□□□ -1.36
SNX13-213ENST00000611725 CSPG4P5Q96PW8 444 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 MRPL45Q9BRJ2 306 aaKnown RBP6.57□□□□□ -1.36
SNX13-213ENST00000611725 BCO2Q9BYV7 579 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 HAPLN2Q9GZV7 340 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 DDX43Q9NXZ2 648 aaKnown RBP6.57□□□□□ -1.36
SNX13-213ENST00000611725 ARMCX1Q9P291 453 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 IPO11Q9UI26 975 aaKnown RBP6.57□□□□□ -1.36
SNX13-213ENST00000611725 SCOCQ9UIL1 159 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 TRIM33Q9UPN9 1127 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 C15orf41Q9Y2V0 281 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 PRG3Q9Y2Y8 225 aaPredicted RBP6.57□□□□□ -1.36
SNX13-213ENST00000611725 CDY2AQ9Y6F7 541 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 CDY1Q9Y6F8 540 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 EIF4E1BA6NMX2 242 aaKnown RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms