RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 C12orf76Q8N812 135 aaPredicted RBP16.65■□□□□ 0.26
CLTCL1-207ENST00000611723 FAM172AQ8WUF8 416 aa16.65■□□□□ 0.26
CLTCL1-207ENST00000611723 SMG7Q92540 1137 aaKnown RBP16.65■□□□□ 0.26
CLTCL1-207ENST00000611723 CD101Q93033 1021 aa16.65■□□□□ 0.26
CLTCL1-207ENST00000611723 HCFC1R1Q9NWW0 138 aa16.65■□□□□ 0.26
CLTCL1-207ENST00000611723 JRKLQ9Y4A0 524 aa16.65■□□□□ 0.26
CLTCL1-207ENST00000611723 ANAPC1Q9H1A4 1944 aa16.64■□□□□ 0.26
CLTCL1-207ENST00000611723 SPDYE4A6NLX3 237 aa16.64■□□□□ 0.25
CLTCL1-207ENST00000611723 M0QYT0 321 aa16.64■□□□□ 0.25
CLTCL1-207ENST00000611723 MOSPD3O75425 235 aa16.64■□□□□ 0.25
CLTCL1-207ENST00000611723 OLFM2O95897 454 aa16.64■□□□□ 0.25
CLTCL1-207ENST00000611723 TBX18O95935 607 aa16.64■□□□□ 0.25
CLTCL1-207ENST00000611723 TFE3P19532 575 aaPredicted RBP16.64■□□□□ 0.25
CLTCL1-207ENST00000611723 DDX6P26196 483 aaKnown RBP eCLIP16.64■□□□□ 0.25
CLTCL1-207ENST00000611723 RDXP35241 583 aaKnown RBP16.64■□□□□ 0.25
CLTCL1-207ENST00000611723 ATP5C1P36542 298 aaKnown RBP16.64■□□□□ 0.25
CLTCL1-207ENST00000611723 PITX1P78337 314 aaPredicted RBP16.64■□□□□ 0.25
CLTCL1-207ENST00000611723 ATP11AP98196 1134 aa16.64■□□□□ 0.25
CLTCL1-207ENST00000611723 PRSS36Q5K4E3 855 aa16.64■□□□□ 0.25
CLTCL1-207ENST00000611723 PDZD4Q76G19 769 aaPredicted RBP16.64■□□□□ 0.25
CLTCL1-207ENST00000611723 PEX26Q7Z412 305 aa16.64■□□□□ 0.25
CLTCL1-207ENST00000611723 GRASPQ7Z6J2 395 aaPredicted RBP16.64■□□□□ 0.25
CLTCL1-207ENST00000611723 TAC4Q86UU9 113 aa16.64■□□□□ 0.25
CLTCL1-207ENST00000611723 CPNE8Q86YQ8 564 aa16.64■□□□□ 0.25
CLTCL1-207ENST00000611723 MRPS31Q92665 395 aaKnown RBP16.64■□□□□ 0.25
CLTCL1-207ENST00000611723 HES6Q96HZ4 224 aa16.64■□□□□ 0.25
CLTCL1-207ENST00000611723 GCNAQ96QF7 691 aa16.64■□□□□ 0.25
CLTCL1-207ENST00000611723 WDR24Q96S15 920 aa16.64■□□□□ 0.25
CLTCL1-207ENST00000611723 GOLPH3Q9H4A6 298 aa16.64■□□□□ 0.25
CLTCL1-207ENST00000611723 CCSER2Q9H7U1 834 aa16.64■□□□□ 0.25
CLTCL1-207ENST00000611723 CLEC1BQ9P126 229 aa16.64■□□□□ 0.25
CLTCL1-207ENST00000611723 CALCOCO1Q9P1Z2 691 aa16.64■□□□□ 0.25
CLTCL1-207ENST00000611723 ZMYM5Q9UJ78 669 aa16.64■□□□□ 0.25
CLTCL1-207ENST00000611723 DENND4CQ5VZ89 1909 aa16.63■□□□□ 0.25
CLTCL1-207ENST00000611723 MIF4GDA9UHW6 222 aaKnown RBP16.63■□□□□ 0.25
CLTCL1-207ENST00000611723 IRAK2O43187 625 aa16.63■□□□□ 0.25
CLTCL1-207ENST00000611723 MYL4P12829 197 aa16.63■□□□□ 0.25
CLTCL1-207ENST00000611723 CTNNA2P26232 953 aa16.63■□□□□ 0.25
CLTCL1-207ENST00000611723 MIPP30301 263 aa16.63■□□□□ 0.25
CLTCL1-207ENST00000611723 CCR2P41597 374 aa16.63■□□□□ 0.25
CLTCL1-207ENST00000611723 CXCR3P49682 368 aa16.63■□□□□ 0.25
CLTCL1-207ENST00000611723 KPNA1P52294 538 aaPredicted RBP16.63■□□□□ 0.25
CLTCL1-207ENST00000611723 DEUP1Q05D60 604 aa16.63■□□□□ 0.25
CLTCL1-207ENST00000611723 HADHQ16836 314 aaKnown RBP16.63■□□□□ 0.25
CLTCL1-207ENST00000611723 C10orf120Q5SQS8 335 aa16.63■□□□□ 0.25
CLTCL1-207ENST00000611723 TMC5Q6UXY8 1006 aa16.63■□□□□ 0.25
CLTCL1-207ENST00000611723 RSRC2Q7L4I2 434 aaKnown RBP16.63■□□□□ 0.25
CLTCL1-207ENST00000611723 SHKBP1Q8TBC3 707 aa16.63■□□□□ 0.25
CLTCL1-207ENST00000611723 PABPC5Q96DU9 382 aaKnown RBP16.63■□□□□ 0.25
CLTCL1-207ENST00000611723 SLC39A13Q96H72 371 aa16.63■□□□□ 0.25
CLTCL1-207ENST00000611723 C16orf45Q96MC5 204 aaPredicted RBP16.63■□□□□ 0.25
CLTCL1-207ENST00000611723 SERPINB11Q96P15 392 aa16.63■□□□□ 0.25
CLTCL1-207ENST00000611723 S1PR5Q9H228 398 aa16.63■□□□□ 0.25
CLTCL1-207ENST00000611723 ADAM7Q9H2U9 754 aa16.63■□□□□ 0.25
CLTCL1-207ENST00000611723 ATXN3LQ9H3M9 355 aa16.63■□□□□ 0.25
CLTCL1-207ENST00000611723 PIDD1Q9HB75 910 aa16.63■□□□□ 0.25
CLTCL1-207ENST00000611723 WDR6Q9NNW5 1121 aaKnown RBP16.63■□□□□ 0.25
CLTCL1-207ENST00000611723 C11orf16Q9NQ32 467 aa16.63■□□□□ 0.25
CLTCL1-207ENST00000611723 DNMT3LQ9UJW3 386 aa16.63■□□□□ 0.25
CLTCL1-207ENST00000611723 NUDT5Q9UKK9 219 aa16.63■□□□□ 0.25
CLTCL1-207ENST00000611723 USTQ9Y2C2 406 aa16.63■□□□□ 0.25
CLTCL1-207ENST00000611723 PCDHA3Q9Y5H8 950 aa16.63■□□□□ 0.25
CLTCL1-207ENST00000611723 CLUHO75153 1309 aa16.63■□□□□ 0.25
CLTCL1-207ENST00000611723 REV3LO60673 3130 aa16.63■□□□□ 0.25
CLTCL1-207ENST00000611723 A0A1W2PRU2 124 aa16.62■□□□□ 0.25
CLTCL1-207ENST00000611723 FAM86C2PA6NEL3 165 aa16.62■□□□□ 0.25
CLTCL1-207ENST00000611723 NRG2O14511 850 aaPredicted RBP16.62■□□□□ 0.25
CLTCL1-207ENST00000611723 COCHO43405 550 aa16.62■□□□□ 0.25
CLTCL1-207ENST00000611723 PSTPIP1O43586 416 aa16.62■□□□□ 0.25
CLTCL1-207ENST00000611723 SPOPO43791 374 aa16.62■□□□□ 0.25
CLTCL1-207ENST00000611723 FTCDO95954 541 aa16.62■□□□□ 0.25
CLTCL1-207ENST00000611723 LTBRP36941 435 aa16.62■□□□□ 0.25
CLTCL1-207ENST00000611723 PEX5P50542 639 aa16.62■□□□□ 0.25
CLTCL1-207ENST00000611723 TAS2R40P59535 323 aa16.62■□□□□ 0.25
CLTCL1-207ENST00000611723 SLC25A11Q02978 314 aaKnown RBP16.62■□□□□ 0.25
CLTCL1-207ENST00000611723 ITIH3Q06033 890 aa16.62■□□□□ 0.25
CLTCL1-207ENST00000611723 CDO1Q16878 200 aa16.62■□□□□ 0.25
CLTCL1-207ENST00000611723 RAB6CQ53S08 254 aa16.62■□□□□ 0.25
CLTCL1-207ENST00000611723 BOLA3Q53S33 107 aa16.62■□□□□ 0.25
CLTCL1-207ENST00000611723 RARS2Q5T160 578 aaKnown RBP16.62■□□□□ 0.25
CLTCL1-207ENST00000611723 POLNQ7Z5Q5 900 aa16.62■□□□□ 0.25
CLTCL1-207ENST00000611723 RHOT1Q8IXI2 618 aa16.62■□□□□ 0.25
CLTCL1-207ENST00000611723 TCEAL4Q96EI5 215 aa16.62■□□□□ 0.25
CLTCL1-207ENST00000611723 TLR10Q9BXR5 811 aa16.62■□□□□ 0.25
CLTCL1-207ENST00000611723 RNF38Q9H0F5 515 aa16.62■□□□□ 0.25
CLTCL1-207ENST00000611723 RAB6CQ9H0N0 254 aa16.62■□□□□ 0.25
CLTCL1-207ENST00000611723 FAM204AQ9H8W3 233 aa16.62■□□□□ 0.25
CLTCL1-207ENST00000611723 PIGVQ9NUD9 493 aa16.62■□□□□ 0.25
CLTCL1-207ENST00000611723 DDIT4Q9NX09 232 aa16.62■□□□□ 0.25
CLTCL1-207ENST00000611723 MARCH2Q9P0N8 246 aa16.62■□□□□ 0.25
CLTCL1-207ENST00000611723 SFMBT1Q9UHJ3 866 aa16.62■□□□□ 0.25
CLTCL1-207ENST00000611723 USP18Q9UMW8 372 aa16.62■□□□□ 0.25
CLTCL1-207ENST00000611723 TLR6Q9Y2C9 796 aa16.62■□□□□ 0.25
CLTCL1-207ENST00000611723 HBS1LQ9Y450 684 aaKnown RBP16.62■□□□□ 0.25
CLTCL1-207ENST00000611723 HYOU1Q9Y4L1 999 aa16.62■□□□□ 0.25
CLTCL1-207ENST00000611723 CCDC66A2RUB6 948 aa16.61■□□□□ 0.25
CLTCL1-207ENST00000611723 C2orf78A6NCI8 922 aa16.61■□□□□ 0.25
CLTCL1-207ENST00000611723 DDX3YO15523 660 aaKnown RBP16.61■□□□□ 0.25
CLTCL1-207ENST00000611723 IGLV3-27P01718 113 aa16.61■□□□□ 0.25
CLTCL1-207ENST00000611723 TNNT1P13805 278 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms