RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 STKLD1Q8NE28 680 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 PIP4K2CQ8TBX8 421 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 SLC2A14Q8TDB8 520 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 EXT2Q93063 718 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 OPTNQ96CV9 577 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 LRRC39Q96DD0 335 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 TRIM56Q9BRZ2 755 aaKnown RBP8.97□□□□□ -0.97
LIG4-204ENST00000611712 MECRQ9BV79 373 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 CCDC68Q9H2F9 335 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 MCM8Q9UJA3 840 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 CHKBQ9Y259 395 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 CILPO75339 1184 aa8.96□□□□□ -0.97
LIG4-204ENST00000611712 FAM155BO75949 473 aa8.96□□□□□ -0.97
LIG4-204ENST00000611712 TMEM63AO94886 807 aa8.96□□□□□ -0.97
LIG4-204ENST00000611712 TSHRP16473 764 aa8.96□□□□□ -0.97
LIG4-204ENST00000611712 IVDP26440 423 aa8.96□□□□□ -0.97
LIG4-204ENST00000611712 KLC3Q6P597 504 aa8.96□□□□□ -0.97
LIG4-204ENST00000611712 CLNKQ7Z7G1 428 aa8.96□□□□□ -0.97
LIG4-204ENST00000611712 TMPRSS6Q8IU80 811 aa8.96□□□□□ -0.97
LIG4-204ENST00000611712 DEFB106AQ8N104 65 aa8.96□□□□□ -0.97
LIG4-204ENST00000611712 FAM13CQ8NE31 585 aa8.96□□□□□ -0.97
LIG4-204ENST00000611712 TEPSINQ96N21 525 aa8.96□□□□□ -0.97
LIG4-204ENST00000611712 LRMDAQ9H2I8 198 aa8.96□□□□□ -0.97
LIG4-204ENST00000611712 NRDE2Q9H7Z3 1164 aa8.96□□□□□ -0.97
LIG4-204ENST00000611712 ADARB2Q9NS39 739 aaKnown RBP8.96□□□□□ -0.97
LIG4-204ENST00000611712 CDY2AQ9Y6F7 541 aa8.96□□□□□ -0.97
LIG4-204ENST00000611712 CDY1Q9Y6F8 540 aa8.96□□□□□ -0.97
LIG4-204ENST00000611712 RNF103O00237 685 aa8.96□□□□□ -0.98
LIG4-204ENST00000611712 UBTFL6P0CB48 400 aaPredicted RBP8.96□□□□□ -0.98
LIG4-204ENST00000611712 RALBP11234 206 aa8.96□□□□□ -0.98
LIG4-204ENST00000611712 ACAT1P24752 427 aaKnown RBP8.96□□□□□ -0.98
LIG4-204ENST00000611712 CNTFP26441 200 aa8.96□□□□□ -0.98
LIG4-204ENST00000611712 ADCYAP1R1P41586 468 aa8.96□□□□□ -0.98
LIG4-204ENST00000611712 GAD2Q05329 585 aa8.96□□□□□ -0.98
LIG4-204ENST00000611712 CCDC15Q0P6D6 951 aa8.96□□□□□ -0.98
LIG4-204ENST00000611712 ADIGQ0VDE8 80 aa8.96□□□□□ -0.98
LIG4-204ENST00000611712 FSTL1Q12841 308 aa8.96□□□□□ -0.98
LIG4-204ENST00000611712 MAP7Q14244 749 aa8.96□□□□□ -0.98
LIG4-204ENST00000611712 PARP6Q2NL67 630 aa8.96□□□□□ -0.98
LIG4-204ENST00000611712 PPP1R26Q5T8A7 1209 aaPredicted RBP8.96□□□□□ -0.98
LIG4-204ENST00000611712 ADGRF2Q8IZF7 708 aa8.96□□□□□ -0.98
LIG4-204ENST00000611712 PPP1R13LQ8WUF5 828 aa8.96□□□□□ -0.98
LIG4-204ENST00000611712 C12orf42Q96LP6 360 aa8.96□□□□□ -0.98
LIG4-204ENST00000611712 B3GNT5Q9BYG0 378 aa8.96□□□□□ -0.98
LIG4-204ENST00000611712 THAP1Q9NVV9 213 aa8.96□□□□□ -0.98
LIG4-204ENST00000611712 CNTNAP2Q9UHC6 1331 aa8.96□□□□□ -0.98
LIG4-204ENST00000611712 MYH4Q9Y623 1939 aa8.96□□□□□ -0.98
LIG4-204ENST00000611712 SLC4A1P02730 911 aa8.96□□□□□ -0.98
LIG4-204ENST00000611712 HOXC6P09630 235 aa8.96□□□□□ -0.98
LIG4-204ENST00000611712 ASPAP45381 313 aa8.96□□□□□ -0.98
LIG4-204ENST00000611712 NR2C2P49116 596 aa8.96□□□□□ -0.98
LIG4-204ENST00000611712 MGAT5Q09328 741 aa8.96□□□□□ -0.98
LIG4-204ENST00000611712 RBBP5Q15291 538 aaKnown RBP8.96□□□□□ -0.98
LIG4-204ENST00000611712 TRIP10Q15642 601 aa8.96□□□□□ -0.98
LIG4-204ENST00000611712 GPR162Q16538 588 aa8.96□□□□□ -0.98
LIG4-204ENST00000611712 AP1ARQ63HQ0 302 aa8.96□□□□□ -0.98
LIG4-204ENST00000611712 C15orf39Q6ZRI6 1047 aa8.96□□□□□ -0.98
LIG4-204ENST00000611712 TMEM192Q8IY95 271 aa8.96□□□□□ -0.98
LIG4-204ENST00000611712 SLC25A41Q8N5S1 370 aa8.96□□□□□ -0.98
LIG4-204ENST00000611712 POU5F2Q8N7G0 328 aa8.96□□□□□ -0.98
LIG4-204ENST00000611712 TTC8Q8TAM2 541 aa8.96□□□□□ -0.98
LIG4-204ENST00000611712 SLC44A1Q8WWI5 657 aa8.96□□□□□ -0.98
LIG4-204ENST00000611712 APBB2Q92870 758 aa8.96□□□□□ -0.98
LIG4-204ENST00000611712 NUF2Q9BZD4 464 aa8.96□□□□□ -0.98
LIG4-204ENST00000611712 RNPEPQ9H4A4 650 aa8.96□□□□□ -0.98
LIG4-204ENST00000611712 PCDH18Q9HCL0 1135 aa8.96□□□□□ -0.98
LIG4-204ENST00000611712 ADA2Q9NZK5 511 aa8.96□□□□□ -0.98
LIG4-204ENST00000611712 STYXL1Q9Y6J8 313 aa8.96□□□□□ -0.98
LIG4-204ENST00000611712 STRCQ7RTU9 1775 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 TTLL13PA6NNM8 815 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 CPA3P15088 417 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 ATP4AP20648 1035 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 MLH1P40692 756 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 ITGA9Q13797 1035 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 OASLQ15646 514 aaKnown RBP8.95□□□□□ -0.98
LIG4-204ENST00000611712 TBCCQ15814 346 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 SH3PXD2AQ5TCZ1 1133 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 SLC27A1Q6PCB7 646 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 MOB2Q70IA6 237 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 STRA8Q7Z7C7 330 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 ZDHHC17Q8IUH5 632 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 PLD5Q8N7P1 536 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 NETO2Q8NC67 525 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 OR6P1Q8NGX9 317 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 FAM193BQ96PV7 902 aaPredicted RBP8.95□□□□□ -0.98
LIG4-204ENST00000611712 LRRC40Q9H9A6 602 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 ARHGEF3Q9NR81 526 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 FNDC3AQ9Y2H6 1198 aaKnown RBP8.95□□□□□ -0.98
LIG4-204ENST00000611712 CCL15-CCL14A0A0B4J2E2 113 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 C2orf71A6NGG8 1288 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 CYB561D2O14569 222 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 USP12O75317 370 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 GMNNO75496 209 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 AP1G2O75843 785 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 CTSHP09668 335 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 ENO3P13929 434 aaPredicted RBP8.95□□□□□ -0.98
LIG4-204ENST00000611712 ACADSP16219 412 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 PTDSS1P48651 473 aaKnown RBP8.95□□□□□ -0.98
LIG4-204ENST00000611712 YWHAZP63104 245 aaKnown RBP8.95□□□□□ -0.98
LIG4-204ENST00000611712 CCL15Q16663 113 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms