RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 ARRDC4Q8NCT1 418 aa16.56■□□□□ 0.24
RTN1-209ENST00000611068 STMN2Q93045 179 aa16.56■□□□□ 0.24
RTN1-209ENST00000611068 ZFP42Q96MM3 310 aa16.56■□□□□ 0.24
RTN1-209ENST00000611068 UTP6Q9NYH9 597 aaKnown RBP16.56■□□□□ 0.24
RTN1-209ENST00000611068 TJP2Q9UDY2 1190 aa16.56■□□□□ 0.24
RTN1-209ENST00000611068 ANK1P16157 1881 aa16.56■□□□□ 0.24
RTN1-209ENST00000611068 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.55■□□□□ 0.24
RTN1-209ENST00000611068 EIF3FO00303 357 aaPredicted RBP16.55■□□□□ 0.24
RTN1-209ENST00000611068 GZMAP12544 262 aa16.55■□□□□ 0.24
RTN1-209ENST00000611068 RPL21P46778 160 aaKnown RBP16.55■□□□□ 0.24
RTN1-209ENST00000611068 DCTN2Q13561 401 aaKnown RBP16.55■□□□□ 0.24
RTN1-209ENST00000611068 THOC5Q13769 683 aaKnown RBP16.55■□□□□ 0.24
RTN1-209ENST00000611068 RBM44Q6ZP01 1051 aaKnown RBP16.55■□□□□ 0.24
RTN1-209ENST00000611068 CCDC25Q86WR0 208 aa16.55■□□□□ 0.24
RTN1-209ENST00000611068 MCOLN2Q8IZK6 566 aa16.55■□□□□ 0.24
RTN1-209ENST00000611068 CXorf38Q8TB03 319 aa16.55■□□□□ 0.24
RTN1-209ENST00000611068 LPPQ93052 612 aa16.55■□□□□ 0.24
RTN1-209ENST00000611068 KIAA1522Q9P206 1035 aaPredicted RBP16.55■□□□□ 0.24
RTN1-209ENST00000611068 GTF2IRD1Q9UHL9 959 aa16.55■□□□□ 0.24
RTN1-209ENST00000611068 A0A0A6YYK5 440 aaPredicted RBP16.55■□□□□ 0.24
RTN1-209ENST00000611068 ADAMTS4O75173 837 aa16.55■□□□□ 0.24
RTN1-209ENST00000611068 GRM5P41594 1212 aa16.55■□□□□ 0.24
RTN1-209ENST00000611068 PSMD7P51665 324 aa16.55■□□□□ 0.24
RTN1-209ENST00000611068 THOC7Q6I9Y2 204 aaKnown RBP16.55■□□□□ 0.24
RTN1-209ENST00000611068 CFAP61Q8NHU2 1237 aa16.55■□□□□ 0.24
RTN1-209ENST00000611068 FNDC8Q8TC99 324 aa16.55■□□□□ 0.24
RTN1-209ENST00000611068 ALG3Q92685 438 aa16.55■□□□□ 0.24
RTN1-209ENST00000611068 GRAMD1AQ96CP6 724 aa16.55■□□□□ 0.24
RTN1-209ENST00000611068 FAIMQ9NVQ4 179 aa16.55■□□□□ 0.24
RTN1-209ENST00000611068 UBAP1Q9NZ09 502 aa16.55■□□□□ 0.24
RTN1-209ENST00000611068 ANAPC7Q9UJX3 599 aa16.55■□□□□ 0.24
RTN1-209ENST00000611068 SNX9Q9Y5X1 595 aa16.55■□□□□ 0.24
RTN1-209ENST00000611068 SPTLC1O15269 473 aa16.54■□□□□ 0.24
RTN1-209ENST00000611068 GSC2O15499 205 aa16.54■□□□□ 0.24
RTN1-209ENST00000611068 SERPINB7O75635 380 aa16.54■□□□□ 0.24
RTN1-209ENST00000611068 PDE5AO76074 875 aa16.54■□□□□ 0.24
RTN1-209ENST00000611068 ACSL3O95573 720 aa16.54■□□□□ 0.24
RTN1-209ENST00000611068 CHRNA1P02708 482 aa16.54■□□□□ 0.24
RTN1-209ENST00000611068 TROVE2P10155 538 aaKnown RBP eCLIP16.54■□□□□ 0.24
RTN1-209ENST00000611068 CDC16Q13042 620 aa16.54■□□□□ 0.24
RTN1-209ENST00000611068 DCAF12L1Q5VU92 463 aa16.54■□□□□ 0.24
RTN1-209ENST00000611068 B3GNT6Q6ZMB0 384 aa16.54■□□□□ 0.24
RTN1-209ENST00000611068 C12orf29Q8N999 325 aa16.54■□□□□ 0.24
RTN1-209ENST00000611068 DGCR14Q96DF8 476 aaKnown RBP16.54■□□□□ 0.24
RTN1-209ENST00000611068 ASB7Q9H672 318 aa16.54■□□□□ 0.24
RTN1-209ENST00000611068 SRRDQ9UH36 339 aa16.54■□□□□ 0.24
RTN1-209ENST00000611068 PHTF1Q9UMS5 762 aa16.54■□□□□ 0.24
RTN1-209ENST00000611068 STXBP5LQ9Y2K9 1186 aa16.54■□□□□ 0.24
RTN1-209ENST00000611068 DCTN3O75935 186 aa16.54■□□□□ 0.24
RTN1-209ENST00000611068 USP1O94782 785 aa16.54■□□□□ 0.24
RTN1-209ENST00000611068 PCSK6P29122 969 aa16.54■□□□□ 0.24
RTN1-209ENST00000611068 GJC1P36383 396 aa16.54■□□□□ 0.24
RTN1-209ENST00000611068 RXRGP48443 463 aa16.54■□□□□ 0.24
RTN1-209ENST00000611068 CRYBB1P53674 252 aaPredicted RBP16.54■□□□□ 0.24
RTN1-209ENST00000611068 SLFN11Q7Z7L1 901 aa16.54■□□□□ 0.24
RTN1-209ENST00000611068 CROCCP2Q86T23 111 aa16.54■□□□□ 0.24
RTN1-209ENST00000611068 DQX1Q8TE96 717 aaKnown RBP16.54■□□□□ 0.24
RTN1-209ENST00000611068 DNAJC17Q9NVM6 304 aaKnown RBP16.54■□□□□ 0.24
RTN1-209ENST00000611068 ST3GAL5Q9UNP4 418 aa16.54■□□□□ 0.24
RTN1-209ENST00000611068 SPO11Q9Y5K1 396 aa16.54■□□□□ 0.24
RTN1-209ENST00000611068 SMIM31A0A1B0GVY4 71 aa16.53■□□□□ 0.24
RTN1-209ENST00000611068 SPOPO43791 374 aa16.53■□□□□ 0.24
RTN1-209ENST00000611068 APLP1P51693 650 aa16.53■□□□□ 0.24
RTN1-209ENST00000611068 NOMO3P69849 1222 aa16.53■□□□□ 0.24
RTN1-209ENST00000611068 CTC1Q2NKJ3 1217 aa16.53■□□□□ 0.24
RTN1-209ENST00000611068 UBXN11Q5T124 520 aa16.53■□□□□ 0.24
RTN1-209ENST00000611068 DENND1BQ6P3S1 775 aa16.53■□□□□ 0.24
RTN1-209ENST00000611068 ISLR2Q6UXK2 745 aa16.53■□□□□ 0.24
RTN1-209ENST00000611068 MTDHQ86UE4 582 aaKnown RBP16.53■□□□□ 0.24
RTN1-209ENST00000611068 RHOT2Q8IXI1 618 aa16.53■□□□□ 0.24
RTN1-209ENST00000611068 UBR7Q8N806 425 aa16.53■□□□□ 0.24
RTN1-209ENST00000611068 UBA3Q8TBC4 463 aa16.53■□□□□ 0.24
RTN1-209ENST00000611068 SNX27Q96L92 541 aa16.53■□□□□ 0.24
RTN1-209ENST00000611068 HEXIM2Q96MH2 286 aaKnown RBP16.53■□□□□ 0.24
RTN1-209ENST00000611068 TRAIPQ9BWF2 469 aa16.53■□□□□ 0.24
RTN1-209ENST00000611068 ELOVL4Q9GZR5 314 aa16.53■□□□□ 0.24
RTN1-209ENST00000611068 TRPV5Q9NQA5 729 aa16.53■□□□□ 0.24
RTN1-209ENST00000611068 TBK1Q9UHD2 729 aa16.53■□□□□ 0.24
RTN1-209ENST00000611068 ZFP69BQ9UJL9 534 aa16.53■□□□□ 0.24
RTN1-209ENST00000611068 CROTQ9UKG9 612 aa16.53■□□□□ 0.24
RTN1-209ENST00000611068 USTQ9Y2C2 406 aa16.53■□□□□ 0.24
RTN1-209ENST00000611068 IPPQ9Y573 584 aa16.53■□□□□ 0.24
RTN1-209ENST00000611068 KANSL1LA0AUZ9 987 aa16.53■□□□□ 0.24
RTN1-209ENST00000611068 CCDC160A6NGH7 325 aa16.53■□□□□ 0.24
RTN1-209ENST00000611068 WDR4P57081 412 aaKnown RBP16.53■□□□□ 0.24
RTN1-209ENST00000611068 CLPPQ16740 277 aaPredicted RBP16.53■□□□□ 0.24
RTN1-209ENST00000611068 KLHDC10Q6PID8 442 aa16.53■□□□□ 0.24
RTN1-209ENST00000611068 SYCE1Q8N0S2 351 aa16.53■□□□□ 0.24
RTN1-209ENST00000611068 ZNF784Q8NCA9 323 aaPredicted RBP16.53■□□□□ 0.24
RTN1-209ENST00000611068 AGO3Q9H9G7 860 aaKnown RBP16.53■□□□□ 0.24
RTN1-209ENST00000611068 STARD13Q9Y3M8 1113 aa16.53■□□□□ 0.24
RTN1-209ENST00000611068 M0QZ92 97 aa16.52■□□□□ 0.24
RTN1-209ENST00000611068 CYP1A2P05177 515 aa16.52■□□□□ 0.24
RTN1-209ENST00000611068 ZNF132P52740 706 aa16.52■□□□□ 0.24
RTN1-209ENST00000611068 RPL7AP62424 266 aaKnown RBP16.52■□□□□ 0.24
RTN1-209ENST00000611068 MRPS6P82932 125 aaKnown RBP16.52■□□□□ 0.24
RTN1-209ENST00000611068 SOX4Q06945 474 aaPredicted RBP16.52■□□□□ 0.24
RTN1-209ENST00000611068 DCAF4L1Q3SXM0 396 aa16.52■□□□□ 0.24
RTN1-209ENST00000611068 ZNF618Q5T7W0 954 aa16.52■□□□□ 0.24
RTN1-209ENST00000611068 C10orf82Q8WW14 230 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms