RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 RNF19AQ9NV58 838 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 WDR27A2RRH5 827 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 TPST1O60507 370 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 VPS26AO75436 327 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 CYP1A2P05177 515 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 RPLP2P05387 115 aaKnown RBP14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 CCDC130P13994 396 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 KBTBD12Q3ZCT8 623 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 AASDHQ4L235 1098 aaPredicted RBP14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 TATDN1Q6P1N9 297 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 KCNT2Q6UVM3 1135 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 OR9Q1Q8NGQ5 310 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 MTIF3Q9H2K0 278 aaKnown RBP14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 GPAMQ9HCL2 828 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 SAE1Q9UBE0 346 aaPredicted RBP14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 MYO1GB0I1T2 1018 aa14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 TBC1D12O60347 775 aa14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 PPP1R11O60927 126 aaPredicted RBP14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 GHRP10912 638 aa14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 FMO1Q01740 532 aa14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 BMT2Q1RMZ1 405 aa14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 UGT3A1Q6NUS8 523 aa14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 ZNF662Q6ZS27 426 aa14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 FAM162AQ96A26 154 aa14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 FAR2Q96K12 515 aa14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 REXO2Q9Y3B8 237 aaKnown RBP14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 NCANO14594 1321 aa14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 RECQL4O94761 1208 aa14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 CKMP06732 381 aa14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 MYBL2P10244 700 aa14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 DDX5P17844 614 aaKnown RBP14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 TFE3P19532 575 aaPredicted RBP14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 MGAT1P26572 445 aa14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 ACVR2BQ13705 512 aa14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 TTLL9Q3SXZ7 439 aa14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 CELF3Q5SZQ8 465 aaKnown RBP14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 N4BP2L1Q5TBK1 243 aaPredicted RBP14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 SCUBE1Q8IWY4 988 aa14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 ZCCHC9Q8N567 271 aaKnown RBP14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 CNDP1Q96KN2 507 aa14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 EFCAB1Q9HAE3 211 aa14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 KPNA6O60684 536 aa14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 LRRC74AQ0VAA2 488 aa14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 ACAP1Q15027 740 aa14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 TTMPQ5BVD1 217 aa14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 TAF2Q6P1X5 1199 aa14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 IRF2BP2Q7Z5L9 587 aa14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 EIF1ADQ8N9N8 165 aaKnown RBP14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 UNKQ9C0B0 810 aaKnown RBP14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 PDGFCQ9NRA1 345 aa14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 TRPM5Q9NZQ8 1165 aa14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 C5orf58C9J3I9 102 aa14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 RNF103O00237 685 aa14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 KDELR1P24390 212 aa14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 RBL1P28749 1068 aa14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 POLD3Q15054 466 aaPredicted RBP14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 UGCGQ16739 394 aa14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 AARS2Q5JTZ9 985 aaKnown RBP14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 HYIQ5T013 277 aa14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 MTG1Q9BT17 334 aaPredicted RBP14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 TMEM106CQ9BVX2 250 aa14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 DLGAP2Q9P1A6 1054 aa14.66□□□□□ -0.06
PCDHB16-201ENST00000609684 GP5P40197 560 aa14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 CDH17Q12864 832 aa14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 CAPSQ13938 189 aa14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 PTAR1Q7Z6K3 402 aaPredicted RBP14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 ATXN2LQ8WWM7 1075 aaKnown RBP14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 APBB2Q92870 758 aa14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 USP13Q92995 863 aaPredicted RBP14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 EIF2AQ9BY44 585 aaKnown RBP14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 BRD8Q9H0E9 1235 aa14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 NCKIPSDQ9NZQ3 722 aa14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 TAGLN3Q9UI15 199 aa14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 VAV3Q9UKW4 847 aa14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 BTNL10A8MVZ5 291 aa14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 IRF6O14896 467 aa14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 NPM3O75607 178 aaKnown RBP14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 NFICP08651 508 aa14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 AXLP30530 894 aa14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 NR2C2P49116 596 aa14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 RRP1BQ14684 758 aaKnown RBP14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 C15orf59Q2T9L4 293 aaPredicted RBP14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 TFAP2DQ7Z6R9 452 aa14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 SMARCD1Q96GM5 515 aa14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 FGFBP2Q9BYJ0 223 aa14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 RRN3Q9NYV6 651 aa14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 CTNNAL1Q9UBT7 734 aa14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 UBR1Q8IWV7 1749 aa14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 RHOCP08134 193 aa14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 CDH2P19022 906 aaPredicted RBP14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 PSEN2P49810 448 aa14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 MRPS35P82673 323 aaKnown RBP14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 ITGB3BPQ13352 177 aaPredicted RBP14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 TMEM132BQ14DG7 1078 aa14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 MARC1Q5VT66 337 aa14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 ILDR2Q71H61 639 aa14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 CARNMT1Q8N4J0 409 aa14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 APOPT1Q96IL0 206 aa14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 SRPK1Q96SB4 655 aaKnown RBP14.65□□□□□ -0.06
PCDHB16-201ENST00000609684 IKZF4Q9H2S9 585 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms