RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 ELMOD1Q8N336 334 aa17.18■□□□□ 0.34
PMF1-206ENST00000606952 LEMD2Q8NC56 503 aa17.18■□□□□ 0.34
PMF1-206ENST00000606952 RNF139Q8WU17 664 aa17.18■□□□□ 0.34
PMF1-206ENST00000606952 CASP10Q92851 521 aa17.18■□□□□ 0.34
PMF1-206ENST00000606952 SLC39A13Q96H72 371 aa17.18■□□□□ 0.34
PMF1-206ENST00000606952 SNRNP25Q9BV90 132 aaKnown RBP17.18■□□□□ 0.34
PMF1-206ENST00000606952 ZNF334Q9HCZ1 680 aaPredicted RBP17.18■□□□□ 0.34
PMF1-206ENST00000606952 DDIT4Q9NX09 232 aa17.18■□□□□ 0.34
PMF1-206ENST00000606952 ARHGEF38Q9NXL2 777 aa17.18■□□□□ 0.34
PMF1-206ENST00000606952 TRPM5Q9NZQ8 1165 aa17.18■□□□□ 0.34
PMF1-206ENST00000606952 MAGED2Q9UNF1 606 aaPredicted RBP17.18■□□□□ 0.34
PMF1-206ENST00000606952 EFR3BQ9Y2G0 817 aa17.18■□□□□ 0.34
PMF1-206ENST00000606952 HELZP42694 1942 aaKnown RBP17.17■□□□□ 0.34
PMF1-206ENST00000606952 C3orf70A6NLC5 250 aaPredicted RBP17.17■□□□□ 0.34
PMF1-206ENST00000606952 SOBPA7XYQ1 873 aa17.17■□□□□ 0.34
PMF1-206ENST00000606952 ZNF185O15231 689 aa17.17■□□□□ 0.34
PMF1-206ENST00000606952 TLR5O60602 858 aa17.17■□□□□ 0.34
PMF1-206ENST00000606952 ZRANB2O95218 330 aaKnown RBP eCLIP17.17■□□□□ 0.34
PMF1-206ENST00000606952 FGF19O95750 216 aa17.17■□□□□ 0.34
PMF1-206ENST00000606952 IGLV3-27P01718 113 aa17.17■□□□□ 0.34
PMF1-206ENST00000606952 PYGMP11217 842 aa17.17■□□□□ 0.34
PMF1-206ENST00000606952 ATXN1P54253 815 aaKnown RBP17.17■□□□□ 0.34
PMF1-206ENST00000606952 CKAP4Q07065 602 aaKnown RBP17.17■□□□□ 0.34
PMF1-206ENST00000606952 PPP2R5DQ14738 602 aa17.17■□□□□ 0.34
PMF1-206ENST00000606952 PDK2Q15119 407 aa17.17■□□□□ 0.34
PMF1-206ENST00000606952 DPYSL2Q16555 572 aa17.17■□□□□ 0.34
PMF1-206ENST00000606952 ERMARDQ5T6L9 678 aa17.17■□□□□ 0.34
PMF1-206ENST00000606952 SEL1L2Q5TEA6 688 aa17.17■□□□□ 0.34
PMF1-206ENST00000606952 TMEM184AQ6ZMB5 413 aa17.17■□□□□ 0.34
PMF1-206ENST00000606952 RCOR2Q8IZ40 523 aa17.17■□□□□ 0.34
PMF1-206ENST00000606952 PPP2R3CQ969Q6 453 aa17.17■□□□□ 0.34
PMF1-206ENST00000606952 ZNF512Q96ME7 567 aaPredicted RBP17.17■□□□□ 0.34
PMF1-206ENST00000606952 PSMB7Q99436 277 aa17.17■□□□□ 0.34
PMF1-206ENST00000606952 FAM204AQ9H8W3 233 aa17.17■□□□□ 0.34
PMF1-206ENST00000606952 FZD10Q9ULW2 581 aa17.17■□□□□ 0.34
PMF1-206ENST00000606952 TLR6Q9Y2C9 796 aa17.17■□□□□ 0.34
PMF1-206ENST00000606952 TRANK1O15050 2925 aa17.16■□□□□ 0.34
PMF1-206ENST00000606952 KRT1P04264 644 aa17.16■□□□□ 0.34
PMF1-206ENST00000606952 POU3F3P20264 500 aaPredicted RBP17.16■□□□□ 0.34
PMF1-206ENST00000606952 CDC25CP30307 473 aa17.16■□□□□ 0.34
PMF1-206ENST00000606952 CXCR5P32302 372 aa17.16■□□□□ 0.34
PMF1-206ENST00000606952 SSR1P43307 286 aaKnown RBP17.16■□□□□ 0.34
PMF1-206ENST00000606952 DNA2P51530 1060 aa17.16■□□□□ 0.34
PMF1-206ENST00000606952 KPNA1P52294 538 aaPredicted RBP17.16■□□□□ 0.34
PMF1-206ENST00000606952 ZNF135P52742 658 aaPredicted RBP17.16■□□□□ 0.34
PMF1-206ENST00000606952 MTA1Q13330 715 aa17.16■□□□□ 0.34
PMF1-206ENST00000606952 TRIP4Q15650 581 aaPredicted RBP17.16■□□□□ 0.34
PMF1-206ENST00000606952 TAF12Q16514 161 aa17.16■□□□□ 0.34
PMF1-206ENST00000606952 ATP13A4Q4VNC1 1196 aa17.16■□□□□ 0.34
PMF1-206ENST00000606952 HECTD3Q5T447 861 aa17.16■□□□□ 0.34
PMF1-206ENST00000606952 CCDC185Q8N715 623 aa17.16■□□□□ 0.34
PMF1-206ENST00000606952 FAF2Q96CS3 445 aa17.16■□□□□ 0.34
PMF1-206ENST00000606952 ZNF576Q9H609 170 aa17.16■□□□□ 0.34
PMF1-206ENST00000606952 NSUN3Q9H649 340 aaKnown RBP17.16■□□□□ 0.34
PMF1-206ENST00000606952 TLE6Q9H808 572 aa17.16■□□□□ 0.34
PMF1-206ENST00000606952 DZANK1Q9NVP4 752 aa17.16■□□□□ 0.34
PMF1-206ENST00000606952 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.16■□□□□ 0.34
PMF1-206ENST00000606952 RCOR3Q9P2K3 495 aaPredicted RBP17.16■□□□□ 0.34
PMF1-206ENST00000606952 PCSK1NQ9UHG2 260 aa17.16■□□□□ 0.34
PMF1-206ENST00000606952 HBS1LQ9Y450 684 aaKnown RBP17.16■□□□□ 0.34
PMF1-206ENST00000606952 KCNU1A8MYU2 1149 aa17.15■□□□□ 0.34
PMF1-206ENST00000606952 PGRMC1O00264 195 aaKnown RBP17.15■□□□□ 0.34
PMF1-206ENST00000606952 PDE2AO00408 941 aaPredicted RBP17.15■□□□□ 0.34
PMF1-206ENST00000606952 PER2O15055 1255 aa17.15■□□□□ 0.34
PMF1-206ENST00000606952 CEP104O60308 925 aa17.15■□□□□ 0.34
PMF1-206ENST00000606952 XYLBO75191 536 aa17.15■□□□□ 0.34
PMF1-206ENST00000606952 SLC2A3P11169 496 aa17.15■□□□□ 0.34
PMF1-206ENST00000606952 KDELR1P24390 212 aa17.15■□□□□ 0.34
PMF1-206ENST00000606952 ADRA1BP35368 520 aa17.15■□□□□ 0.34
PMF1-206ENST00000606952 CDKN2BP42772 138 aa17.15■□□□□ 0.34
PMF1-206ENST00000606952 NRG1Q02297 640 aaPredicted RBP17.15■□□□□ 0.34
PMF1-206ENST00000606952 SEMA3BQ13214 749 aa17.15■□□□□ 0.34
PMF1-206ENST00000606952 NME3Q13232 169 aa17.15■□□□□ 0.34
PMF1-206ENST00000606952 TFDP3Q5H9I0 405 aa17.15■□□□□ 0.34
PMF1-206ENST00000606952 SPOCD1Q6ZMY3 1216 aa17.15■□□□□ 0.34
PMF1-206ENST00000606952 GAREM2Q75VX8 874 aa17.15■□□□□ 0.34
PMF1-206ENST00000606952 SND1Q7KZF4 910 aaKnown RBP eCLIP17.15■□□□□ 0.34
PMF1-206ENST00000606952 RSRC2Q7L4I2 434 aaKnown RBP17.15■□□□□ 0.34
PMF1-206ENST00000606952 FAM131BQ86XD5 332 aa17.15■□□□□ 0.34
PMF1-206ENST00000606952 CEP112Q8N8E3 955 aa17.15■□□□□ 0.34
PMF1-206ENST00000606952 ADAM32Q8TC27 787 aa17.15■□□□□ 0.34
PMF1-206ENST00000606952 RAPGEF5Q92565 580 aa17.15■□□□□ 0.34
PMF1-206ENST00000606952 TSC1Q92574 1164 aa17.15■□□□□ 0.34
PMF1-206ENST00000606952 ZNF707Q96C28 371 aaPredicted RBP17.15■□□□□ 0.34
PMF1-206ENST00000606952 RPGRIP1Q96KN7 1286 aa17.15■□□□□ 0.34
PMF1-206ENST00000606952 FCRL2Q96LA5 508 aaPredicted RBP17.15■□□□□ 0.34
PMF1-206ENST00000606952 NAP1L3Q99457 506 aaPredicted RBP17.15■□□□□ 0.34
PMF1-206ENST00000606952 ZNF670Q9BS34 389 aa17.15■□□□□ 0.34
PMF1-206ENST00000606952 PRKD2Q9BZL6 878 aa17.15■□□□□ 0.34
PMF1-206ENST00000606952 CCSER2Q9H7U1 834 aa17.15■□□□□ 0.34
PMF1-206ENST00000606952 ASAH2Q9NR71 780 aa17.15■□□□□ 0.34
PMF1-206ENST00000606952 MTMR10Q9NXD2 777 aa17.15■□□□□ 0.34
PMF1-206ENST00000606952 AP4E1Q9UPM8 1137 aa17.15■□□□□ 0.34
PMF1-206ENST00000606952 C2orf16Q68DN1 1984 aa17.15■□□□□ 0.34
PMF1-206ENST00000606952 LAMA3Q16787 3333 aa17.14■□□□□ 0.34
PMF1-206ENST00000606952 hCG_1818297A0A087WSY0 165 aa17.14■□□□□ 0.33
PMF1-206ENST00000606952 I6L893 689 aaPredicted RBP17.14■□□□□ 0.33
PMF1-206ENST00000606952 RFPL2O75678 378 aa17.14■□□□□ 0.33
PMF1-206ENST00000606952 CSPG5O95196 566 aa17.14■□□□□ 0.33
PMF1-206ENST00000606952 DDX6P26196 483 aaKnown RBP eCLIP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms