RNA–Protein interactions for RNA: ENST00000605383.1

CTHRC1P1-201, Transcript of collagen triple helix repeat containing 1 pseudogene 1, humanhuman

BASIC

Gene CTHRC1P1, Length 469 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1P1-201ENST00000605383 RNF26Q9BY78 433 aaPredicted RBP3.47□□□□□ -1.85
CTHRC1P1-201ENST00000605383 TMEM184CQ9NVA4 438 aa3.47□□□□□ -1.85
CTHRC1P1-201ENST00000605383 CAPN11Q9UMQ6 739 aa3.47□□□□□ -1.85
CTHRC1P1-201ENST00000605383 CNTNAP2Q9UHC6 1331 aa3.46□□□□□ -1.85
CTHRC1P1-201ENST00000605383 LY6G6EA0A0G2JKS1 128 aa3.46□□□□□ -1.86
CTHRC1P1-201ENST00000605383 RHPN2P1A8MT19 583 aa3.46□□□□□ -1.86
CTHRC1P1-201ENST00000605383 AGPSO00116 658 aa3.46□□□□□ -1.86
CTHRC1P1-201ENST00000605383 COQ9O75208 318 aa3.46□□□□□ -1.86
CTHRC1P1-201ENST00000605383 SYF2O95926 243 aaKnown RBP3.46□□□□□ -1.86
CTHRC1P1-201ENST00000605383 CRYABP02511 175 aaKnown RBP3.46□□□□□ -1.86
CTHRC1P1-201ENST00000605383 RHCEP18577 417 aa3.46□□□□□ -1.86
CTHRC1P1-201ENST00000605383 ATF3P18847 181 aa3.46□□□□□ -1.86
CTHRC1P1-201ENST00000605383 MATN1P21941 496 aa3.46□□□□□ -1.86
CTHRC1P1-201ENST00000605383 COPAP53621 1224 aa3.46□□□□□ -1.86
CTHRC1P1-201ENST00000605383 WDR5P61964 334 aaKnown RBP3.46□□□□□ -1.86
CTHRC1P1-201ENST00000605383 YPEL5P62699 121 aa3.46□□□□□ -1.86
CTHRC1P1-201ENST00000605383 RHDQ02161 417 aa3.46□□□□□ -1.86
CTHRC1P1-201ENST00000605383 DEUP1Q05D60 604 aa3.46□□□□□ -1.86
CTHRC1P1-201ENST00000605383 SRSF1Q07955 248 aaKnown RBP eCLIP3.46□□□□□ -1.86
CTHRC1P1-201ENST00000605383 GPS1Q13098 491 aa3.46□□□□□ -1.86
CTHRC1P1-201ENST00000605383 GRM3Q14832 879 aa3.46□□□□□ -1.86
CTHRC1P1-201ENST00000605383 GLE1Q53GS7 698 aaKnown RBP3.46□□□□□ -1.86
CTHRC1P1-201ENST00000605383 DAB2IPQ5VWQ8 1189 aa3.46□□□□□ -1.86
CTHRC1P1-201ENST00000605383 RUSC1-AS1Q66K80 236 aa3.46□□□□□ -1.86
CTHRC1P1-201ENST00000605383 USP17L6PQ6QN14 398 aa3.46□□□□□ -1.86
CTHRC1P1-201ENST00000605383 COLCA1Q6ZS62 124 aa3.46□□□□□ -1.86
CTHRC1P1-201ENST00000605383 ZDHHC17Q8IUH5 632 aa3.46□□□□□ -1.86
CTHRC1P1-201ENST00000605383 SAMD14Q8IZD0 417 aaPredicted RBP3.46□□□□□ -1.86
CTHRC1P1-201ENST00000605383 BCAS4Q8TDM0 211 aa3.46□□□□□ -1.86
CTHRC1P1-201ENST00000605383 VCPIP1Q96JH7 1222 aa3.46□□□□□ -1.86
CTHRC1P1-201ENST00000605383 ZBTB26Q9HCK0 441 aa3.46□□□□□ -1.86
CTHRC1P1-201ENST00000605383 DDX20Q9UHI6 824 aaKnown RBP3.46□□□□□ -1.86
CTHRC1P1-201ENST00000605383 VPS51Q9UID3 782 aa3.46□□□□□ -1.86
CTHRC1P1-201ENST00000605383 ASAP1Q9ULH1 1129 aa3.46□□□□□ -1.86
CTHRC1P1-201ENST00000605383 G3BP2Q9UN86 482 aaKnown RBP3.46□□□□□ -1.86
CTHRC1P1-201ENST00000605383 HEMK1Q9Y5R4 338 aaPredicted RBP3.46□□□□□ -1.86
CTHRC1P1-201ENST00000605383 COL15A1P39059 1388 aa3.46□□□□□ -1.86
CTHRC1P1-201ENST00000605383 IGKV2D-30A0A075B6S6 120 aa3.45□□□□□ -1.86
CTHRC1P1-201ENST00000605383 CD8B2A6NJW9 211 aa3.45□□□□□ -1.86
CTHRC1P1-201ENST00000605383 A6NNZ2 444 aa3.45□□□□□ -1.86
CTHRC1P1-201ENST00000605383 F8W810 466 aa3.45□□□□□ -1.86
CTHRC1P1-201ENST00000605383 CA12O43570 354 aa3.45□□□□□ -1.86
CTHRC1P1-201ENST00000605383 CNOT3O75175 753 aaKnown RBP3.45□□□□□ -1.86
CTHRC1P1-201ENST00000605383 IL18RAPO95256 599 aa3.45□□□□□ -1.86
CTHRC1P1-201ENST00000605383 PLAUP00749 431 aa3.45□□□□□ -1.86
CTHRC1P1-201ENST00000605383 ATF7P17544 494 aaPredicted RBP3.45□□□□□ -1.86
CTHRC1P1-201ENST00000605383 MMP8P22894 467 aa3.45□□□□□ -1.86
CTHRC1P1-201ENST00000605383 CDC25AP30304 524 aa3.45□□□□□ -1.86
CTHRC1P1-201ENST00000605383 GALNSP34059 522 aa3.45□□□□□ -1.86
CTHRC1P1-201ENST00000605383 IL6STP40189 918 aaPredicted RBP3.45□□□□□ -1.86
CTHRC1P1-201ENST00000605383 SEMA5AQ13591 1074 aa3.45□□□□□ -1.86
CTHRC1P1-201ENST00000605383 DNASE1L3Q13609 305 aa3.45□□□□□ -1.86
CTHRC1P1-201ENST00000605383 DAG1Q14118 895 aa3.45□□□□□ -1.86
CTHRC1P1-201ENST00000605383 SEC23BQ15437 767 aa3.45□□□□□ -1.86
CTHRC1P1-201ENST00000605383 TRIM71Q2Q1W2 868 aaKnown RBP3.45□□□□□ -1.86
CTHRC1P1-201ENST00000605383 MANEAQ5SRI9 462 aa3.45□□□□□ -1.86
CTHRC1P1-201ENST00000605383 FAXCQ5TGI0 409 aa3.45□□□□□ -1.86
CTHRC1P1-201ENST00000605383 BEND5Q7L4P6 421 aa3.45□□□□□ -1.86
CTHRC1P1-201ENST00000605383 KRT28Q7Z3Y7 464 aa3.45□□□□□ -1.86
CTHRC1P1-201ENST00000605383 KAT2BQ92831 832 aa3.45□□□□□ -1.86
CTHRC1P1-201ENST00000605383 NLRP4Q96MN2 994 aa3.45□□□□□ -1.86
CTHRC1P1-201ENST00000605383 EIF3CQ99613 913 aaKnown RBP3.45□□□□□ -1.86
CTHRC1P1-201ENST00000605383 SENP7Q9BQF6 1050 aa3.45□□□□□ -1.86
CTHRC1P1-201ENST00000605383 TUBB6Q9BUF5 446 aa3.45□□□□□ -1.86
CTHRC1P1-201ENST00000605383 MAGEB5Q9BZ81 275 aa3.45□□□□□ -1.86
CTHRC1P1-201ENST00000605383 TRIM2Q9C040 744 aa3.45□□□□□ -1.86
CTHRC1P1-201ENST00000605383 TMEM45AQ9NWC5 275 aa3.45□□□□□ -1.86
CTHRC1P1-201ENST00000605383 OBP2AQ9NY56 170 aa3.45□□□□□ -1.86
CTHRC1P1-201ENST00000605383 WWOXQ9NZC7 414 aa3.45□□□□□ -1.86
CTHRC1P1-201ENST00000605383 HEY2Q9UBP5 337 aa3.45□□□□□ -1.86
CTHRC1P1-201ENST00000605383 IPO11Q9UI26 975 aaKnown RBP3.45□□□□□ -1.86
CTHRC1P1-201ENST00000605383 SIRT4Q9Y6E7 314 aaPredicted RBP3.45□□□□□ -1.86
CTHRC1P1-201ENST00000605383 ZNF335Q9H4Z2 1342 aaPredicted RBP3.44□□□□□ -1.86
CTHRC1P1-201ENST00000605383 B4DGG1 531 aa3.44□□□□□ -1.86
CTHRC1P1-201ENST00000605383 PRAMEF2O60811 474 aa3.44□□□□□ -1.86
CTHRC1P1-201ENST00000605383 ZC3H11AO75152 810 aaKnown RBP eCLIP3.44□□□□□ -1.86
CTHRC1P1-201ENST00000605383 PSG1P11464 419 aa3.44□□□□□ -1.86
CTHRC1P1-201ENST00000605383 MYL4P12829 197 aa3.44□□□□□ -1.86
CTHRC1P1-201ENST00000605383 TFEBP19484 476 aa3.44□□□□□ -1.86
CTHRC1P1-201ENST00000605383 DRD1P21728 446 aa3.44□□□□□ -1.86
CTHRC1P1-201ENST00000605383 RPS6KB1P23443 525 aa3.44□□□□□ -1.86
CTHRC1P1-201ENST00000605383 DUSP1P28562 367 aa3.44□□□□□ -1.86
CTHRC1P1-201ENST00000605383 ATICP31939 592 aa3.44□□□□□ -1.86
CTHRC1P1-201ENST00000605383 THBS4P35443 961 aa3.44□□□□□ -1.86
CTHRC1P1-201ENST00000605383 VPS41P49754 854 aa3.44□□□□□ -1.86
CTHRC1P1-201ENST00000605383 B4GALNT1Q00973 533 aa3.44□□□□□ -1.86
CTHRC1P1-201ENST00000605383 MTA1Q13330 715 aa3.44□□□□□ -1.86
CTHRC1P1-201ENST00000605383 ACOX1Q15067 660 aa3.44□□□□□ -1.86
CTHRC1P1-201ENST00000605383 MRNIPQ6NTE8 343 aa3.44□□□□□ -1.86
CTHRC1P1-201ENST00000605383 FAM57BQ71RH2 274 aa3.44□□□□□ -1.86
CTHRC1P1-201ENST00000605383 TTC30AQ86WT1 665 aa3.44□□□□□ -1.86
CTHRC1P1-201ENST00000605383 MMP21Q8N119 569 aa3.44□□□□□ -1.86
CTHRC1P1-201ENST00000605383 KRT78Q8N1N4 520 aa3.44□□□□□ -1.86
CTHRC1P1-201ENST00000605383 CCDC33Q8N5R6 958 aa3.44□□□□□ -1.86
CTHRC1P1-201ENST00000605383 PHKBQ93100 1093 aa3.44□□□□□ -1.86
CTHRC1P1-201ENST00000605383 FCRL5Q96RD9 977 aa3.44□□□□□ -1.86
CTHRC1P1-201ENST00000605383 SELENOOQ9BVL4 669 aa3.44□□□□□ -1.86
CTHRC1P1-201ENST00000605383 SCNM1Q9BWG6 230 aa3.44□□□□□ -1.86
CTHRC1P1-201ENST00000605383 FAM234AQ9H0X4 552 aa3.44□□□□□ -1.86
CTHRC1P1-201ENST00000605383 VPS45Q9NRW7 570 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms