RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 PECAM1P16284 738 aaPredicted RBP4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 ECHS1P30084 290 aa4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 KCNJ5P48544 419 aa4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 PIK3CGP48736 1102 aa4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 NLRP5P59047 1200 aa4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 CTXN1P60606 82 aa4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 MC1RQ01726 317 aa4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 TBCEQ15813 527 aaPredicted RBP4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 ASIC2Q16515 512 aa4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 DUSP28Q4G0W2 176 aa4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 C19orf54Q5BKX5 351 aa4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 DCAF12L1Q5VU92 463 aa4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 KANK2Q63ZY3 851 aa4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 KAZNQ674X7 775 aa4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 NAA16Q6N069 864 aaPredicted RBP4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 SLC22A25Q6T423 547 aa4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 ZDHHC24Q6UX98 284 aa4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 PXKQ7Z7A4 578 aa4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 IQCA1Q86XH1 822 aa4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 KRT73Q86Y46 540 aa4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 CEP57L1Q8IYX8 460 aa4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 ADSSL1Q8N142 457 aa4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 PQLC1Q8N2U9 271 aa4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 NAT8LQ8N9F0 302 aa4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 AVL9Q8NBF6 648 aa4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 KYQ8NBH2 561 aa4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 GOT1L1Q8NHS2 421 aaPredicted RBP4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 SMARCC2Q8TAQ2 1214 aa4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 FNIP1Q8TF40 1166 aa4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 USP6NLQ92738 828 aa4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 SECISBP2LQ93073 1101 aaKnown RBP4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 TBC1D31Q96DN5 1066 aa4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 CNDP2Q96KP4 475 aaKnown RBP4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 JAKMIP1Q96N16 626 aaKnown RBP4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 RBM15Q96T37 977 aaKnown RBP eCLIP4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 MYCBPQ99417 103 aaPredicted RBP4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 GPATCH1Q9BRR8 931 aaKnown RBP4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 VPS16Q9H269 839 aa4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 LDAHQ9H6V9 325 aa4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 SYNCQ9H7C4 482 aa4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 CCDC177Q9NQR7 707 aaPredicted RBP4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 EIF2B3Q9NR50 452 aaKnown RBP4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 SEPT11Q9NVA2 429 aaKnown RBP4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 ZDHHC8Q9ULC8 765 aa4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 TMCC3Q9ULS5 477 aa4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 DAPP1Q9UN19 280 aa4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 DERAQ9Y315 318 aa4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 PSAT1Q9Y617 370 aa4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 ANKRD36BQ8N2N9 1353 aa4.27□□□□□ -1.73
IGHV3-29-201ENST00000604817 TTC21AQ8NDW8 1320 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 A0A0G2JLW4 131 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 CCDC78A2IDD5 438 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 FAM90A18PA6NE21 464 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 FAM90A16PA6NEW6 464 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 FAM90A9PA6NNJ1 464 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 FAM90A5PA8MXJ8 464 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 E7EVH7 732 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 WNT10BO00744 389 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 CLGNO14967 610 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 SLC7A4O43246 635 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 HTATSF1O43719 755 aaKnown RBP4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 KRT38O76015 456 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 BEST1O76090 585 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 TGDSO95455 350 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 F9P00740 461 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 ANXA6P08133 673 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 FAM90A15PP0C7V4 464 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 FAM90A14PP0C7W9 464 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 TNFRSF1AP19438 455 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 PCSK1P29120 753 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 RGS2P41220 211 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 PHKA1P46020 1223 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 RGS19P49795 217 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 MRE11P49959 708 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 MLLT6P55198 1093 aaPredicted RBP4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 ITGA1P56199 1179 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 PER3P56645 1201 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 ADAM17P78536 824 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 IL13RA1P78552 427 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 ZXDAP98168 799 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 MTM1Q13496 603 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 HABP2Q14520 560 aaPredicted RBP4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 ANKRD1Q15327 319 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 TBCCQ15814 346 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 DGKDQ16760 1214 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 SLC5A9Q2M3M2 681 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 PRICKLE4Q2TBC4 344 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 TRIM60Q495X7 471 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 NRN1LQ496H8 165 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 TTC22Q5TAA0 569 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 ATPAF1Q5TC12 328 aaPredicted RBP4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 GRAMD4Q6IC98 578 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 IL27RAQ6UWB1 636 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 TMC5Q6UXY8 1006 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 SZRD1Q7Z422 152 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 DNAJB7Q7Z6W7 309 aaPredicted RBP4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 CCDC28AQ8IWP9 274 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 YAF2Q8IY57 180 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 DIS3L2Q8IYB7 885 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms