RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 PDCL3Q9H2J4 239 aa12.07□□□□□ -0.48
CCDC12-209ENST00000604164 SIX2Q9NPC8 291 aa12.07□□□□□ -0.48
CCDC12-209ENST00000604164 PLCB1Q9NQ66 1216 aa12.07□□□□□ -0.48
CCDC12-209ENST00000604164 DNAJC17Q9NVM6 304 aaKnown RBP12.07□□□□□ -0.48
CCDC12-209ENST00000604164 FANCLQ9NW38 375 aa12.07□□□□□ -0.48
CCDC12-209ENST00000604164 TAB2Q9NYJ8 693 aa12.07□□□□□ -0.48
CCDC12-209ENST00000604164 CACNA1IQ9P0X4 2223 aa12.07□□□□□ -0.48
CCDC12-209ENST00000604164 SMTNL1A8MU46 457 aa12.06□□□□□ -0.48
CCDC12-209ENST00000604164 K7EQS6 105 aa12.06□□□□□ -0.48
CCDC12-209ENST00000604164 FOXN3O00409 490 aaPredicted RBP12.06□□□□□ -0.48
CCDC12-209ENST00000604164 CAPN9O14815 690 aa12.06□□□□□ -0.48
CCDC12-209ENST00000604164 ZBTB24O43167 697 aaPredicted RBP12.06□□□□□ -0.48
CCDC12-209ENST00000604164 TULP3O75386 442 aa12.06□□□□□ -0.48
CCDC12-209ENST00000604164 ALDH1A2O94788 518 aa12.06□□□□□ -0.48
CCDC12-209ENST00000604164 APBB3O95704 486 aa12.06□□□□□ -0.48
CCDC12-209ENST00000604164 GLI1P08151 1106 aa12.06□□□□□ -0.48
CCDC12-209ENST00000604164 NCAM1P13591 858 aa12.06□□□□□ -0.48
CCDC12-209ENST00000604164 UCHL3P15374 230 aa12.06□□□□□ -0.48
CCDC12-209ENST00000604164 SLC6A11P48066 632 aa12.06□□□□□ -0.48
CCDC12-209ENST00000604164 SLC11A2P49281 568 aa12.06□□□□□ -0.48
CCDC12-209ENST00000604164 DGKEP52429 567 aa12.06□□□□□ -0.48
CCDC12-209ENST00000604164 KDSRQ06136 332 aa12.06□□□□□ -0.48
CCDC12-209ENST00000604164 TYRO3Q06418 890 aa12.06□□□□□ -0.48
CCDC12-209ENST00000604164 RING1Q06587 406 aa12.06□□□□□ -0.48
CCDC12-209ENST00000604164 NNTQ13423 1086 aa12.06□□□□□ -0.48
CCDC12-209ENST00000604164 DMC1Q14565 340 aa12.06□□□□□ -0.48
CCDC12-209ENST00000604164 DRAP1Q14919 205 aaPredicted RBP12.06□□□□□ -0.48
CCDC12-209ENST00000604164 KRT31Q15323 416 aa12.06□□□□□ -0.48
CCDC12-209ENST00000604164 EOGTQ5NDL2 527 aa12.06□□□□□ -0.48
CCDC12-209ENST00000604164 NAIF1Q69YI7 327 aaPredicted RBP12.06□□□□□ -0.48
CCDC12-209ENST00000604164 DENND1BQ6P3S1 775 aa12.06□□□□□ -0.48
CCDC12-209ENST00000604164 TPGS1Q6ZTW0 290 aa12.06□□□□□ -0.48
CCDC12-209ENST00000604164 DENND1CQ8IV53 801 aa12.06□□□□□ -0.48
CCDC12-209ENST00000604164 GPR161Q8N6U8 529 aaKnown RBP12.06□□□□□ -0.48
CCDC12-209ENST00000604164 NAT16Q8N8M0 369 aa12.06□□□□□ -0.48
CCDC12-209ENST00000604164 TERB1Q8NA31 727 aa12.06□□□□□ -0.48
CCDC12-209ENST00000604164 MSANTD4Q8NCY6 345 aa12.06□□□□□ -0.48
CCDC12-209ENST00000604164 IPO4Q8TEX9 1081 aaKnown RBP12.06□□□□□ -0.48
CCDC12-209ENST00000604164 NDRG1Q92597 394 aaKnown RBP12.06□□□□□ -0.48
CCDC12-209ENST00000604164 RUBCNQ92622 972 aa12.06□□□□□ -0.48
CCDC12-209ENST00000604164 SERPINB11Q96P15 392 aa12.06□□□□□ -0.48
CCDC12-209ENST00000604164 HINFPQ9BQA5 517 aa12.06□□□□□ -0.48
CCDC12-209ENST00000604164 LSM14BQ9BX40 385 aaKnown RBP12.06□□□□□ -0.48
CCDC12-209ENST00000604164 STK33Q9BYT3 514 aa12.06□□□□□ -0.48
CCDC12-209ENST00000604164 VPS16Q9H269 839 aa12.06□□□□□ -0.48
CCDC12-209ENST00000604164 SYNCQ9H7C4 482 aa12.06□□□□□ -0.48
CCDC12-209ENST00000604164 TMEM51Q9NW97 253 aa12.06□□□□□ -0.48
CCDC12-209ENST00000604164 AGO1Q9UL18 857 aaKnown RBP12.06□□□□□ -0.48
CCDC12-209ENST00000604164 MMP17Q9ULZ9 603 aa12.06□□□□□ -0.48
CCDC12-209ENST00000604164 NPC1O15118 1278 aa12.05□□□□□ -0.48
CCDC12-209ENST00000604164 CALCAP01258 141 aa12.05□□□□□ -0.48
CCDC12-209ENST00000604164 KLKB1P03952 638 aa12.05□□□□□ -0.48
CCDC12-209ENST00000604164 FNTBP49356 437 aa12.05□□□□□ -0.48
CCDC12-209ENST00000604164 DGKGP49619 791 aa12.05□□□□□ -0.48
CCDC12-209ENST00000604164 SEC13P55735 322 aa12.05□□□□□ -0.48
CCDC12-209ENST00000604164 APBA1Q02410 837 aa12.05□□□□□ -0.48
CCDC12-209ENST00000604164 MTA1Q13330 715 aa12.05□□□□□ -0.48
CCDC12-209ENST00000604164 PDCLQ13371 301 aa12.05□□□□□ -0.48
CCDC12-209ENST00000604164 MPPE1Q53F39 396 aa12.05□□□□□ -0.48
CCDC12-209ENST00000604164 C2orf27AQ580R0 203 aa12.05□□□□□ -0.48
CCDC12-209ENST00000604164 EFHC1Q5JVL4 640 aa12.05□□□□□ -0.48
CCDC12-209ENST00000604164 ADGRF1Q5T601 910 aa12.05□□□□□ -0.48
CCDC12-209ENST00000604164 HEATR6Q6AI08 1181 aaKnown RBP12.05□□□□□ -0.48
CCDC12-209ENST00000604164 SDE2Q6IQ49 451 aa12.05□□□□□ -0.48
CCDC12-209ENST00000604164 CAVIN1Q6NZI2 390 aaKnown RBP12.05□□□□□ -0.48
CCDC12-209ENST00000604164 C11orf57Q6ZUT1 292 aaPredicted RBP12.05□□□□□ -0.48
CCDC12-209ENST00000604164 C12orf40Q86WS4 652 aa12.05□□□□□ -0.48
CCDC12-209ENST00000604164 ZDHHC17Q8IUH5 632 aa12.05□□□□□ -0.48
CCDC12-209ENST00000604164 SCUBE3Q8IX30 993 aa12.05□□□□□ -0.48
CCDC12-209ENST00000604164 FAM217AQ8IXS0 508 aa12.05□□□□□ -0.48
CCDC12-209ENST00000604164 ZNF557Q8N988 423 aaPredicted RBP12.05□□□□□ -0.48
CCDC12-209ENST00000604164 TMEM35BQ8NCS4 154 aa12.05□□□□□ -0.48
CCDC12-209ENST00000604164 TSTD1Q8NFU3 115 aa12.05□□□□□ -0.48
CCDC12-209ENST00000604164 WBP2Q969T9 261 aa12.05□□□□□ -0.48
CCDC12-209ENST00000604164 AZIN2Q96A70 460 aa12.05□□□□□ -0.48
CCDC12-209ENST00000604164 PPP1R13BQ96KQ4 1090 aa12.05□□□□□ -0.48
CCDC12-209ENST00000604164 BPIFA3Q9BQP9 254 aa12.05□□□□□ -0.48
CCDC12-209ENST00000604164 SLC2A11Q9BYW1 496 aa12.05□□□□□ -0.48
CCDC12-209ENST00000604164 POPDC2Q9HBU9 364 aa12.05□□□□□ -0.48
CCDC12-209ENST00000604164 POLMQ9NP87 494 aaPredicted RBP12.05□□□□□ -0.48
CCDC12-209ENST00000604164 ASNSD1Q9NWL6 643 aa12.05□□□□□ -0.48
CCDC12-209ENST00000604164 TMEM63CQ9P1W3 806 aa12.05□□□□□ -0.48
CCDC12-209ENST00000604164 NCDNQ9UBB6 729 aa12.05□□□□□ -0.48
CCDC12-209ENST00000604164 EBF1Q9UH73 591 aa12.05□□□□□ -0.48
CCDC12-209ENST00000604164 LIMA1Q9UHB6 759 aaKnown RBP12.05□□□□□ -0.48
CCDC12-209ENST00000604164 SFMBT1Q9UHJ3 866 aa12.05□□□□□ -0.48
CCDC12-209ENST00000604164 GMEB2Q9UKD1 530 aa12.05□□□□□ -0.48
CCDC12-209ENST00000604164 SMG5Q9UPR3 1016 aaKnown RBP12.05□□□□□ -0.48
CCDC12-209ENST00000604164 TYW5A2RUC4 315 aaKnown RBP12.04□□□□□ -0.48
CCDC12-209ENST00000604164 LRRC10BA6NIK2 292 aa12.04□□□□□ -0.48
CCDC12-209ENST00000604164 LGALS16A8MUM7 142 aa12.04□□□□□ -0.48
CCDC12-209ENST00000604164 E5RJQ4 531 aa12.04□□□□□ -0.48
CCDC12-209ENST00000604164 PIK3R2O00459 728 aa12.04□□□□□ -0.48
CCDC12-209ENST00000604164 AXIN1O15169 862 aa12.04□□□□□ -0.48
CCDC12-209ENST00000604164 IRAK2O43187 625 aa12.04□□□□□ -0.48
CCDC12-209ENST00000604164 GABBR2O75899 941 aa12.04□□□□□ -0.48
CCDC12-209ENST00000604164 LSM8O95777 96 aaKnown RBP12.04□□□□□ -0.48
CCDC12-209ENST00000604164 PENKP01210 267 aaPredicted RBP12.04□□□□□ -0.48
CCDC12-209ENST00000604164 SLC2A3P11169 496 aa12.04□□□□□ -0.48
CCDC12-209ENST00000604164 CLCN1P35523 988 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms