RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 RAD54BQ9Y620 910 aa13.83□□□□□ -0.2
RPS28-204ENST00000602140 PLXND1Q9Y4D7 1925 aa13.83□□□□□ -0.2
RPS28-204ENST00000602140 CEP295Q9C0D2 2601 aa13.82□□□□□ -0.2
RPS28-204ENST00000602140 A0A1W2PQ27 194 aa13.82□□□□□ -0.2
RPS28-204ENST00000602140 A0A1W2PQ64 194 aa13.82□□□□□ -0.2
RPS28-204ENST00000602140 A0A1W2PQD8 194 aa13.82□□□□□ -0.2
RPS28-204ENST00000602140 WASH3PC4AMC7 463 aa13.82□□□□□ -0.2
RPS28-204ENST00000602140 ZNF217O75362 1048 aa13.82□□□□□ -0.2
RPS28-204ENST00000602140 HMBSP08397 361 aa13.82□□□□□ -0.2
RPS28-204ENST00000602140 HOXD12P35452 270 aa13.82□□□□□ -0.2
RPS28-204ENST00000602140 MXI1P50539 228 aa13.82□□□□□ -0.2
RPS28-204ENST00000602140 ATXN3P54252 364 aaPredicted RBP13.82□□□□□ -0.2
RPS28-204ENST00000602140 RAD23BP54727 409 aa13.82□□□□□ -0.2
RPS28-204ENST00000602140 COG7P83436 770 aa13.82□□□□□ -0.2
RPS28-204ENST00000602140 ZNF33AQ06730 810 aa13.82□□□□□ -0.2
RPS28-204ENST00000602140 EFEMP1Q12805 493 aa13.82□□□□□ -0.2
RPS28-204ENST00000602140 DUOXA1Q1HG43 343 aa13.82□□□□□ -0.2
RPS28-204ENST00000602140 EDRF1Q3B7T1 1238 aa13.82□□□□□ -0.2
RPS28-204ENST00000602140 PEAR1Q5VY43 1037 aaPredicted RBP13.82□□□□□ -0.2
RPS28-204ENST00000602140 SLC41A1Q8IVJ1 513 aa13.82□□□□□ -0.2
RPS28-204ENST00000602140 SLC4A11Q8NBS3 891 aa13.82□□□□□ -0.2
RPS28-204ENST00000602140 FBXL13Q8NEE6 735 aa13.82□□□□□ -0.2
RPS28-204ENST00000602140 CEP76Q8TAP6 659 aa13.82□□□□□ -0.2
RPS28-204ENST00000602140 TMEM176AQ96HP8 235 aa13.82□□□□□ -0.2
RPS28-204ENST00000602140 FAXDC2Q96IV6 333 aa13.82□□□□□ -0.2
RPS28-204ENST00000602140 ARID3AQ99856 593 aa13.82□□□□□ -0.2
RPS28-204ENST00000602140 SLC6A17Q9H1V8 727 aa13.82□□□□□ -0.2
RPS28-204ENST00000602140 CISHQ9NSE2 258 aa13.82□□□□□ -0.2
RPS28-204ENST00000602140 FBXO10Q9UK96 956 aa13.82□□□□□ -0.2
RPS28-204ENST00000602140 SLC6A14Q9UN76 642 aa13.82□□□□□ -0.2
RPS28-204ENST00000602140 ZNF510Q9Y2H8 683 aa13.82□□□□□ -0.2
RPS28-204ENST00000602140 GFRA2O00451 464 aa13.81□□□□□ -0.2
RPS28-204ENST00000602140 CETN3O15182 167 aa13.81□□□□□ -0.2
RPS28-204ENST00000602140 TOP3BO95985 862 aaKnown RBP13.81□□□□□ -0.2
RPS28-204ENST00000602140 EPB41P11171 864 aaKnown RBP13.81□□□□□ -0.2
RPS28-204ENST00000602140 SPINK2P20155 84 aa13.81□□□□□ -0.2
RPS28-204ENST00000602140 CORO1AP31146 461 aaKnown RBP13.81□□□□□ -0.2
RPS28-204ENST00000602140 CHKAP35790 457 aa13.81□□□□□ -0.2
RPS28-204ENST00000602140 MCCD1P59942 119 aaPredicted RBP13.81□□□□□ -0.2
RPS28-204ENST00000602140 GFPT1Q06210 699 aaPredicted RBP13.81□□□□□ -0.2
RPS28-204ENST00000602140 FYB2Q5VWT5 728 aa13.81□□□□□ -0.2
RPS28-204ENST00000602140 PIGZQ86VD9 579 aa13.81□□□□□ -0.2
RPS28-204ENST00000602140 TTC39CQ8N584 583 aa13.81□□□□□ -0.2
RPS28-204ENST00000602140 TATDN2Q93075 761 aa13.81□□□□□ -0.2
RPS28-204ENST00000602140 MRGPRX1Q96LB2 322 aa13.81□□□□□ -0.2
RPS28-204ENST00000602140 GTPBP2Q9BX10 602 aaKnown RBP13.81□□□□□ -0.2
RPS28-204ENST00000602140 DCLK3Q9C098 648 aa13.81□□□□□ -0.2
RPS28-204ENST00000602140 GDPD2Q9HCC8 539 aa13.81□□□□□ -0.2
RPS28-204ENST00000602140 CD93Q9NPY3 652 aa13.81□□□□□ -0.2
RPS28-204ENST00000602140 WASF3Q9UPY6 502 aa13.81□□□□□ -0.2
RPS28-204ENST00000602140 ATP6V1DQ9Y5K8 247 aa13.81□□□□□ -0.2
RPS28-204ENST00000602140 STON1Q9Y6Q2 735 aa13.81□□□□□ -0.2
RPS28-204ENST00000602140 C1QTNF9BB2RNN3 333 aa13.8□□□□□ -0.2
RPS28-204ENST00000602140 STX10O60499 249 aa13.8□□□□□ -0.2
RPS28-204ENST00000602140 NDUFS2O75306 463 aa13.8□□□□□ -0.2
RPS28-204ENST00000602140 PENKP01210 267 aaPredicted RBP13.8□□□□□ -0.2
RPS28-204ENST00000602140 PROS1P07225 676 aa13.8□□□□□ -0.2
RPS28-204ENST00000602140 SERPINF2P08697 491 aa13.8□□□□□ -0.2
RPS28-204ENST00000602140 C1QTNF9P0C862 333 aa13.8□□□□□ -0.2
RPS28-204ENST00000602140 MFAP3P55082 362 aa13.8□□□□□ -0.2
RPS28-204ENST00000602140 YWHAGP61981 247 aaKnown RBP eCLIP13.8□□□□□ -0.2
RPS28-204ENST00000602140 GEN1Q17RS7 908 aa13.8□□□□□ -0.2
RPS28-204ENST00000602140 RAB41Q5JT25 222 aa13.8□□□□□ -0.2
RPS28-204ENST00000602140 ARHGAP17Q68EM7 881 aa13.8□□□□□ -0.2
RPS28-204ENST00000602140 KIAA1324Q6UXG2 1013 aaKnown RBP13.8□□□□□ -0.2
RPS28-204ENST00000602140 RSRC2Q7L4I2 434 aaKnown RBP13.8□□□□□ -0.2
RPS28-204ENST00000602140 DENND1CQ8IV53 801 aa13.8□□□□□ -0.2
RPS28-204ENST00000602140 ARHGAP18Q8N392 663 aa13.8□□□□□ -0.2
RPS28-204ENST00000602140 TRIML1Q8N9V2 468 aa13.8□□□□□ -0.2
RPS28-204ENST00000602140 ANKRD52Q8NB46 1076 aa13.8□□□□□ -0.2
RPS28-204ENST00000602140 HSPA12BQ96MM6 686 aa13.8□□□□□ -0.2
RPS28-204ENST00000602140 UBXN6Q9BZV1 441 aa13.8□□□□□ -0.2
RPS28-204ENST00000602140 SLC32A1Q9H598 525 aa13.8□□□□□ -0.2
RPS28-204ENST00000602140 CAPN10Q9HC96 672 aa13.8□□□□□ -0.2
RPS28-204ENST00000602140 MARCH2Q9P0N8 246 aa13.8□□□□□ -0.2
RPS28-204ENST00000602140 AGO1Q9UL18 857 aaKnown RBP13.8□□□□□ -0.2
RPS28-204ENST00000602140 STRIP2Q9ULQ0 834 aa13.8□□□□□ -0.2
RPS28-204ENST00000602140 SLC27A6Q9Y2P4 619 aa13.8□□□□□ -0.2
RPS28-204ENST00000602140 CFAP47Q6ZTR5 3102 aa13.8□□□□□ -0.2
RPS28-204ENST00000602140 SLC12A8A0AV02 714 aa13.79□□□□□ -0.2
RPS28-204ENST00000602140 PRCPP42785 496 aa13.79□□□□□ -0.2
RPS28-204ENST00000602140 TKTL1P51854 596 aa13.79□□□□□ -0.2
RPS28-204ENST00000602140 SLC8A3P57103 927 aa13.79□□□□□ -0.2
RPS28-204ENST00000602140 SEMA3BQ13214 749 aa13.79□□□□□ -0.2
RPS28-204ENST00000602140 PNOCQ13519 176 aa13.79□□□□□ -0.2
RPS28-204ENST00000602140 STARD3Q14849 445 aa13.79□□□□□ -0.2
RPS28-204ENST00000602140 FUT11Q495W5 492 aa13.79□□□□□ -0.2
RPS28-204ENST00000602140 CBWD6Q4V339 395 aa13.79□□□□□ -0.2
RPS28-204ENST00000602140 DCAF17Q5H9S7 520 aaPredicted RBP13.79□□□□□ -0.2
RPS28-204ENST00000602140 CBWD3Q5JTY5 395 aa13.79□□□□□ -0.2
RPS28-204ENST00000602140 CBWD5Q5RIA9 395 aa13.79□□□□□ -0.2
RPS28-204ENST00000602140 TCERG1LQ5VWI1 586 aa13.79□□□□□ -0.2
RPS28-204ENST00000602140 UNQ6494/PRO21346Q6UXR6 183 aa13.79□□□□□ -0.2
RPS28-204ENST00000602140 RABEPKQ7Z6M1 372 aa13.79□□□□□ -0.2
RPS28-204ENST00000602140 RGL4Q8IZJ4 473 aa13.79□□□□□ -0.2
RPS28-204ENST00000602140 HDDC3Q8N4P3 179 aa13.79□□□□□ -0.2
RPS28-204ENST00000602140 CCDC34Q96HJ3 373 aa13.79□□□□□ -0.2
RPS28-204ENST00000602140 ZNF419Q96HQ0 510 aaPredicted RBP13.79□□□□□ -0.2
RPS28-204ENST00000602140 CEP192Q8TEP8 1941 aa13.78□□□□□ -0.2
RPS28-204ENST00000602140 GON4LQ3T8J9 2241 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms