RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 RPL34P49207 117 aaKnown RBP10.53□□□□□ -0.72
UPF1-213ENST00000601981 DAOAP59103 153 aa10.53□□□□□ -0.72
UPF1-213ENST00000601981 YWHAGP61981 247 aaKnown RBP eCLIP10.53□□□□□ -0.72
UPF1-213ENST00000601981 ZP2Q05996 745 aa10.53□□□□□ -0.72
UPF1-213ENST00000601981 NAA30Q147X3 362 aaPredicted RBP10.53□□□□□ -0.72
UPF1-213ENST00000601981 EFHC1Q5JVL4 640 aa10.53□□□□□ -0.72
UPF1-213ENST00000601981 TEX35Q5T0J7 233 aa10.53□□□□□ -0.72
UPF1-213ENST00000601981 CCDC181Q5TID7 509 aa10.53□□□□□ -0.72
UPF1-213ENST00000601981 TXNDC8Q6A555 127 aa10.53□□□□□ -0.72
UPF1-213ENST00000601981 TMEM150AQ86TG1 271 aa10.53□□□□□ -0.72
UPF1-213ENST00000601981 TMEM110Q86TL2 294 aa10.53□□□□□ -0.72
UPF1-213ENST00000601981 CMTM8Q8IZV2 173 aa10.53□□□□□ -0.72
UPF1-213ENST00000601981 GPR161Q8N6U8 529 aaKnown RBP10.53□□□□□ -0.72
UPF1-213ENST00000601981 MAB21L3Q8N8X9 362 aa10.53□□□□□ -0.72
UPF1-213ENST00000601981 ZSCAN18Q8TBC5 510 aaPredicted RBP10.53□□□□□ -0.72
UPF1-213ENST00000601981 FEZF2Q8TBJ5 459 aa10.53□□□□□ -0.72
UPF1-213ENST00000601981 COG1Q8WTW3 980 aa10.53□□□□□ -0.72
UPF1-213ENST00000601981 RNF139Q8WU17 664 aa10.53□□□□□ -0.72
UPF1-213ENST00000601981 SMARCD2Q92925 531 aa10.53□□□□□ -0.72
UPF1-213ENST00000601981 FAM149B1Q96BN6 582 aa10.53□□□□□ -0.72
UPF1-213ENST00000601981 C18orf8Q96DM3 657 aa10.53□□□□□ -0.72
UPF1-213ENST00000601981 HES6Q96HZ4 224 aa10.53□□□□□ -0.72
UPF1-213ENST00000601981 PBKQ96KB5 322 aa10.53□□□□□ -0.72
UPF1-213ENST00000601981 CAPZA3Q96KX2 299 aa10.53□□□□□ -0.72
UPF1-213ENST00000601981 MYADMQ96S97 322 aa10.53□□□□□ -0.72
UPF1-213ENST00000601981 NUP85Q9BW27 656 aa10.53□□□□□ -0.72
UPF1-213ENST00000601981 ZFP14Q9HCL3 533 aa10.53□□□□□ -0.72
UPF1-213ENST00000601981 ABCC13Q9NSE7 274 aa10.53□□□□□ -0.72
UPF1-213ENST00000601981 WDR35Q9P2L0 1181 aa10.53□□□□□ -0.72
UPF1-213ENST00000601981 CNOT8Q9UFF9 292 aaKnown RBP10.53□□□□□ -0.72
UPF1-213ENST00000601981 CHORDC1Q9UHD1 332 aaPredicted RBP10.53□□□□□ -0.72
UPF1-213ENST00000601981 SCINQ9Y6U3 715 aa10.53□□□□□ -0.72
UPF1-213ENST00000601981 BDP1A6H8Y1 2624 aa10.53□□□□□ -0.72
UPF1-213ENST00000601981 C5orf42Q9H799 3197 aa10.53□□□□□ -0.72
UPF1-213ENST00000601981 A0A1W2PQH9 124 aa10.52□□□□□ -0.73
UPF1-213ENST00000601981 MIF4GDA9UHW6 222 aaKnown RBP10.52□□□□□ -0.73
UPF1-213ENST00000601981 PDE2AO00408 941 aaPredicted RBP10.52□□□□□ -0.73
UPF1-213ENST00000601981 PIK3R2O00459 728 aa10.52□□□□□ -0.73
UPF1-213ENST00000601981 CAPN9O14815 690 aa10.52□□□□□ -0.73
UPF1-213ENST00000601981 ZNF185O15231 689 aa10.52□□□□□ -0.73
UPF1-213ENST00000601981 ATMINO43313 823 aaPredicted RBP10.52□□□□□ -0.73
UPF1-213ENST00000601981 TLR5O60602 858 aa10.52□□□□□ -0.73
UPF1-213ENST00000601981 OAS1P00973 400 aaKnown RBP10.52□□□□□ -0.73
UPF1-213ENST00000601981 LTFP02788 710 aa10.52□□□□□ -0.73
UPF1-213ENST00000601981 GLI1P08151 1106 aa10.52□□□□□ -0.73
UPF1-213ENST00000601981 CFHP08603 1231 aa10.52□□□□□ -0.73
UPF1-213ENST00000601981 MBL2P11226 248 aaPredicted RBP10.52□□□□□ -0.73
UPF1-213ENST00000601981 RARGP13631 454 aa10.52□□□□□ -0.73
UPF1-213ENST00000601981 DESP17661 470 aa10.52□□□□□ -0.73
UPF1-213ENST00000601981 MMP8P22894 467 aa10.52□□□□□ -0.73
UPF1-213ENST00000601981 ATP5C1P36542 298 aaKnown RBP10.52□□□□□ -0.73
UPF1-213ENST00000601981 PAFAH1B1P43034 410 aa10.52□□□□□ -0.73
UPF1-213ENST00000601981 ZNF268Q14587 947 aaPredicted RBP10.52□□□□□ -0.73
UPF1-213ENST00000601981 PTPN20Q4JDL3 420 aa10.52□□□□□ -0.73
UPF1-213ENST00000601981 C10orf120Q5SQS8 335 aa10.52□□□□□ -0.73
UPF1-213ENST00000601981 OR6B2Q6IFH4 312 aa10.52□□□□□ -0.73
UPF1-213ENST00000601981 YAF2Q8IY57 180 aa10.52□□□□□ -0.73
UPF1-213ENST00000601981 GJD3Q8N144 294 aa10.52□□□□□ -0.73
UPF1-213ENST00000601981 ZNF276Q8N554 614 aa10.52□□□□□ -0.73
UPF1-213ENST00000601981 CELF5Q8N6W0 485 aaKnown RBP10.52□□□□□ -0.73
UPF1-213ENST00000601981 ADAMTS19Q8TE59 1207 aa10.52□□□□□ -0.73
UPF1-213ENST00000601981 DEPDC1BQ8WUY9 529 aa10.52□□□□□ -0.73
UPF1-213ENST00000601981 CPA5Q8WXQ8 436 aa10.52□□□□□ -0.73
UPF1-213ENST00000601981 ASB16Q96NS5 453 aa10.52□□□□□ -0.73
UPF1-213ENST00000601981 CPXM1Q96SM3 734 aa10.52□□□□□ -0.73
UPF1-213ENST00000601981 TRPV4Q9HBA0 871 aa10.52□□□□□ -0.73
UPF1-213ENST00000601981 TDP1Q9NUW8 608 aa10.52□□□□□ -0.73
UPF1-213ENST00000601981 ASNSD1Q9NWL6 643 aa10.52□□□□□ -0.73
UPF1-213ENST00000601981 THG1LQ9NWX6 298 aaKnown RBP10.52□□□□□ -0.73
UPF1-213ENST00000601981 OBP2AQ9NY56 170 aa10.52□□□□□ -0.73
UPF1-213ENST00000601981 ADAM22Q9P0K1 906 aa10.52□□□□□ -0.73
UPF1-213ENST00000601981 LCMT1Q9UIC8 334 aa10.52□□□□□ -0.73
UPF1-213ENST00000601981 C2orf78A6NCI8 922 aa10.51□□□□□ -0.73
UPF1-213ENST00000601981 KCNK3O14649 394 aa10.51□□□□□ -0.73
UPF1-213ENST00000601981 HSF2BPO75031 334 aa10.51□□□□□ -0.73
UPF1-213ENST00000601981 ECI2O75521 394 aa10.51□□□□□ -0.73
UPF1-213ENST00000601981 COL9A1P20849 921 aa10.51□□□□□ -0.73
UPF1-213ENST00000601981 RRM1P23921 792 aa10.51□□□□□ -0.73
UPF1-213ENST00000601981 SCNN1AP37088 669 aa10.51□□□□□ -0.73
UPF1-213ENST00000601981 GABRB2P47870 512 aa10.51□□□□□ -0.73
UPF1-213ENST00000601981 PTP4A2Q12974 167 aa10.51□□□□□ -0.73
UPF1-213ENST00000601981 FAM78AQ5JUQ0 283 aa10.51□□□□□ -0.73
UPF1-213ENST00000601981 STXBP5Q5T5C0 1151 aa10.51□□□□□ -0.73
UPF1-213ENST00000601981 BSPRYQ5W0U4 402 aa10.51□□□□□ -0.73
UPF1-213ENST00000601981 PLEKHA7Q6IQ23 1121 aa10.51□□□□□ -0.73
UPF1-213ENST00000601981 CC2D1AQ6P1N0 951 aaPredicted RBP10.51□□□□□ -0.73
UPF1-213ENST00000601981 KLHDC10Q6PID8 442 aa10.51□□□□□ -0.73
UPF1-213ENST00000601981 BEND5Q7L4P6 421 aa10.51□□□□□ -0.73
UPF1-213ENST00000601981 ARID3BQ8IVW6 561 aaPredicted RBP10.51□□□□□ -0.73
UPF1-213ENST00000601981 SCUBE3Q8IX30 993 aa10.51□□□□□ -0.73
UPF1-213ENST00000601981 WDTC1Q8N5D0 677 aa10.51□□□□□ -0.73
UPF1-213ENST00000601981 ARL14EPQ8N8R7 260 aaPredicted RBP10.51□□□□□ -0.73
UPF1-213ENST00000601981 ELSPBP1Q96BH3 223 aa10.51□□□□□ -0.73
UPF1-213ENST00000601981 UHRF1Q96T88 793 aaPredicted RBP10.51□□□□□ -0.73
UPF1-213ENST00000601981 PSMB7Q99436 277 aa10.51□□□□□ -0.73
UPF1-213ENST00000601981 C11orf70Q9BRQ4 267 aa10.51□□□□□ -0.73
UPF1-213ENST00000601981 SELENOOQ9BVL4 669 aa10.51□□□□□ -0.73
UPF1-213ENST00000601981 SLC46A2Q9BY10 475 aa10.51□□□□□ -0.73
UPF1-213ENST00000601981 GOLPH3Q9H4A6 298 aa10.51□□□□□ -0.73
UPF1-213ENST00000601981 POPDC2Q9HBU9 364 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms