RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 TRIM21P19474 475 aaKnown RBP18.91■□□□□ 0.62
CHMP2A-208ENST00000601220 RAD23BP54727 409 aa18.91■□□□□ 0.62
CHMP2A-208ENST00000601220 ZNF33AQ06730 810 aa18.91■□□□□ 0.62
CHMP2A-208ENST00000601220 SEMA3BQ13214 749 aa18.91■□□□□ 0.62
CHMP2A-208ENST00000601220 EDRF1Q3B7T1 1238 aa18.91■□□□□ 0.62
CHMP2A-208ENST00000601220 ZNF394Q53GI3 561 aa18.91■□□□□ 0.62
CHMP2A-208ENST00000601220 ERLEC1Q96DZ1 483 aa18.91■□□□□ 0.62
CHMP2A-208ENST00000601220 ZNF419Q96HQ0 510 aaPredicted RBP18.91■□□□□ 0.62
CHMP2A-208ENST00000601220 MRGPRX1Q96LB2 322 aa18.91■□□□□ 0.62
CHMP2A-208ENST00000601220 HEXIM2Q96MH2 286 aaKnown RBP18.91■□□□□ 0.62
CHMP2A-208ENST00000601220 SLC6A17Q9H1V8 727 aa18.91■□□□□ 0.62
CHMP2A-208ENST00000601220 CISHQ9NSE2 258 aa18.91■□□□□ 0.62
CHMP2A-208ENST00000601220 CACNA2D2Q9NY47 1150 aa18.91■□□□□ 0.62
CHMP2A-208ENST00000601220 SLC6A14Q9UN76 642 aa18.91■□□□□ 0.62
CHMP2A-208ENST00000601220 SLC27A6Q9Y2P4 619 aa18.91■□□□□ 0.62
CHMP2A-208ENST00000601220 FRYQ5TBA9 3013 aa18.91■□□□□ 0.62
CHMP2A-208ENST00000601220 MYO18AQ92614 2054 aaKnown RBP18.91■□□□□ 0.62
CHMP2A-208ENST00000601220 C1QTNF9BB2RNN3 333 aa18.9■□□□□ 0.62
CHMP2A-208ENST00000601220 ZNF217O75362 1048 aa18.9■□□□□ 0.62
CHMP2A-208ENST00000601220 ZNF202O95125 648 aa18.9■□□□□ 0.62
CHMP2A-208ENST00000601220 SERPINF2P08697 491 aa18.9■□□□□ 0.62
CHMP2A-208ENST00000601220 C1QTNF9P0C862 333 aa18.9■□□□□ 0.62
CHMP2A-208ENST00000601220 MAPK8P45983 427 aa18.9■□□□□ 0.62
CHMP2A-208ENST00000601220 ENPP2Q13822 863 aa18.9■□□□□ 0.62
CHMP2A-208ENST00000601220 DUOXA1Q1HG43 343 aa18.9■□□□□ 0.62
CHMP2A-208ENST00000601220 ARHGAP17Q68EM7 881 aa18.9■□□□□ 0.62
CHMP2A-208ENST00000601220 SDE2Q6IQ49 451 aa18.9■□□□□ 0.62
CHMP2A-208ENST00000601220 TADA2BQ86TJ2 420 aa18.9■□□□□ 0.62
CHMP2A-208ENST00000601220 RBBP8NLQ8NC74 664 aaPredicted RBP18.9■□□□□ 0.62
CHMP2A-208ENST00000601220 CEP76Q8TAP6 659 aa18.9■□□□□ 0.62
CHMP2A-208ENST00000601220 TATDN2Q93075 761 aa18.9■□□□□ 0.62
CHMP2A-208ENST00000601220 BHMTQ93088 406 aa18.9■□□□□ 0.62
CHMP2A-208ENST00000601220 CCDC47Q96A33 483 aaKnown RBP18.9■□□□□ 0.62
CHMP2A-208ENST00000601220 EEF2KMTQ96G04 330 aa18.9■□□□□ 0.62
CHMP2A-208ENST00000601220 TMEM176AQ96HP8 235 aa18.9■□□□□ 0.62
CHMP2A-208ENST00000601220 ARID3AQ99856 593 aa18.9■□□□□ 0.62
CHMP2A-208ENST00000601220 RAB20Q9NX57 234 aa18.9■□□□□ 0.62
CHMP2A-208ENST00000601220 CYP8B1Q9UNU6 501 aa18.9■□□□□ 0.62
CHMP2A-208ENST00000601220 ZNF510Q9Y2H8 683 aa18.9■□□□□ 0.62
CHMP2A-208ENST00000601220 RALAP11233 206 aa18.89■□□□□ 0.61
CHMP2A-208ENST00000601220 SPINK2P20155 84 aa18.89■□□□□ 0.61
CHMP2A-208ENST00000601220 MFAP3P55082 362 aa18.89■□□□□ 0.61
CHMP2A-208ENST00000601220 COG7P83436 770 aa18.89■□□□□ 0.61
CHMP2A-208ENST00000601220 FOXC1Q12948 553 aa18.89■□□□□ 0.61
CHMP2A-208ENST00000601220 BHLHA9Q7RTU4 235 aa18.89■□□□□ 0.61
CHMP2A-208ENST00000601220 PIGZQ86VD9 579 aa18.89■□□□□ 0.61
CHMP2A-208ENST00000601220 SMYD4Q8IYR2 804 aaPredicted RBP18.89■□□□□ 0.61
CHMP2A-208ENST00000601220 CCDC150Q8NCX0 1101 aa18.89■□□□□ 0.61
CHMP2A-208ENST00000601220 FBXL13Q8NEE6 735 aa18.89■□□□□ 0.61
CHMP2A-208ENST00000601220 PIWIL1Q96J94 861 aaKnown RBP18.89■□□□□ 0.61
CHMP2A-208ENST00000601220 CDK5RAP1Q96SZ6 601 aaKnown RBP18.89■□□□□ 0.61
CHMP2A-208ENST00000601220 THAP10Q9P2Z0 257 aaPredicted RBP18.89■□□□□ 0.61
CHMP2A-208ENST00000601220 AGO1Q9UL18 857 aaKnown RBP18.89■□□□□ 0.61
CHMP2A-208ENST00000601220 CLEC4EQ9ULY5 219 aa18.89■□□□□ 0.61
CHMP2A-208ENST00000601220 GON4LQ3T8J9 2241 aa18.88■□□□□ 0.61
CHMP2A-208ENST00000601220 CFIP05156 583 aa18.88■□□□□ 0.61
CHMP2A-208ENST00000601220 EFEMP1Q12805 493 aa18.88■□□□□ 0.61
CHMP2A-208ENST00000601220 GEN1Q17RS7 908 aa18.88■□□□□ 0.61
CHMP2A-208ENST00000601220 PM20D1Q6GTS8 502 aa18.88■□□□□ 0.61
CHMP2A-208ENST00000601220 METTL3Q86U44 580 aaKnown RBP18.88■□□□□ 0.61
CHMP2A-208ENST00000601220 FAM217AQ8IXS0 508 aa18.88■□□□□ 0.61
CHMP2A-208ENST00000601220 TRIML1Q8N9V2 468 aa18.88■□□□□ 0.61
CHMP2A-208ENST00000601220 ANKRD52Q8NB46 1076 aa18.88■□□□□ 0.61
CHMP2A-208ENST00000601220 SCAND2PQ9GZW5 306 aaPredicted RBP18.88■□□□□ 0.61
CHMP2A-208ENST00000601220 FAM124BQ9H5Z6 455 aaPredicted RBP18.88■□□□□ 0.61
CHMP2A-208ENST00000601220 COQ4Q9Y3A0 265 aa18.88■□□□□ 0.61
CHMP2A-208ENST00000601220 STON1Q9Y6Q2 735 aa18.88■□□□□ 0.61
CHMP2A-208ENST00000601220 CFAP47Q6ZTR5 3102 aa18.88■□□□□ 0.61
CHMP2A-208ENST00000601220 CHD6Q8TD26 2715 aa18.87■□□□□ 0.61
CHMP2A-208ENST00000601220 TULP2O00295 520 aa18.87■□□□□ 0.61
CHMP2A-208ENST00000601220 HMBSP08397 361 aa18.87■□□□□ 0.61
CHMP2A-208ENST00000601220 CORO1AP31146 461 aaKnown RBP18.87■□□□□ 0.61
CHMP2A-208ENST00000601220 CHKAP35790 457 aa18.87■□□□□ 0.61
CHMP2A-208ENST00000601220 IL12RB1P42701 662 aa18.87■□□□□ 0.61
CHMP2A-208ENST00000601220 MXI1P50539 228 aa18.87■□□□□ 0.61
CHMP2A-208ENST00000601220 GFPT1Q06210 699 aaPredicted RBP18.87■□□□□ 0.61
CHMP2A-208ENST00000601220 FUT11Q495W5 492 aa18.87■□□□□ 0.61
CHMP2A-208ENST00000601220 CBWD6Q4V339 395 aa18.87■□□□□ 0.61
CHMP2A-208ENST00000601220 CBWD3Q5JTY5 395 aa18.87■□□□□ 0.61
CHMP2A-208ENST00000601220 CBWD5Q5RIA9 395 aa18.87■□□□□ 0.61
CHMP2A-208ENST00000601220 UNQ6494/PRO21346Q6UXR6 183 aa18.87■□□□□ 0.61
CHMP2A-208ENST00000601220 ZC3H3Q8IXZ2 948 aaKnown RBP18.87■□□□□ 0.61
CHMP2A-208ENST00000601220 ASCC3Q8N3C0 2202 aaKnown RBP18.87■□□□□ 0.61
CHMP2A-208ENST00000601220 TTC39CQ8N584 583 aa18.87■□□□□ 0.61
CHMP2A-208ENST00000601220 KDF1Q8NAX2 398 aaPredicted RBP18.87■□□□□ 0.61
CHMP2A-208ENST00000601220 NDRG1Q92597 394 aaKnown RBP18.87■□□□□ 0.61
CHMP2A-208ENST00000601220 SCNM1Q9BWG6 230 aa18.87■□□□□ 0.61
CHMP2A-208ENST00000601220 DCLK3Q9C098 648 aa18.87■□□□□ 0.61
CHMP2A-208ENST00000601220 MKRN2Q9H000 416 aaKnown RBP18.87■□□□□ 0.61
CHMP2A-208ENST00000601220 RASAL2Q9UJF2 1139 aa18.87■□□□□ 0.61
CHMP2A-208ENST00000601220 ARHGAP33O14559 1287 aa18.86■□□□□ 0.61
CHMP2A-208ENST00000601220 ZBTB24O43167 697 aaPredicted RBP18.86■□□□□ 0.61
CHMP2A-208ENST00000601220 CD59P13987 128 aa18.86■□□□□ 0.61
CHMP2A-208ENST00000601220 YWHAGP61981 247 aaKnown RBP eCLIP18.86■□□□□ 0.61
CHMP2A-208ENST00000601220 DENND1CQ8IV53 801 aa18.86■□□□□ 0.61
CHMP2A-208ENST00000601220 ARHGAP18Q8N392 663 aa18.86■□□□□ 0.61
CHMP2A-208ENST00000601220 CPXM2Q8N436 756 aa18.86■□□□□ 0.61
CHMP2A-208ENST00000601220 OR2I1PQ8NGU4 316 aa18.86■□□□□ 0.61
CHMP2A-208ENST00000601220 GATA6Q92908 595 aa18.86■□□□□ 0.61
CHMP2A-208ENST00000601220 HSPA12BQ96MM6 686 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms