RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 PIGZQ86VD9 579 aa17.84■□□□□ 0.45
SCAF1-204ENST00000601038 FMR1NBQ8N0W7 255 aaPredicted RBP17.84■□□□□ 0.45
SCAF1-204ENST00000601038 BHMTQ93088 406 aa17.84■□□□□ 0.45
SCAF1-204ENST00000601038 TSG101Q99816 390 aa17.84■□□□□ 0.45
SCAF1-204ENST00000601038 NUSAP1Q9BXS6 441 aaKnown RBP17.84■□□□□ 0.45
SCAF1-204ENST00000601038 DCLK3Q9C098 648 aa17.84■□□□□ 0.45
SCAF1-204ENST00000601038 PLK2Q9NYY3 685 aa17.84■□□□□ 0.45
SCAF1-204ENST00000601038 RASAL2Q9UJF2 1139 aa17.84■□□□□ 0.45
SCAF1-204ENST00000601038 PILRBQ9UKJ0 227 aa17.84■□□□□ 0.45
SCAF1-204ENST00000601038 COQ4Q9Y3A0 265 aa17.84■□□□□ 0.45
SCAF1-204ENST00000601038 CACNA1BQ00975 2339 aa17.84■□□□□ 0.45
SCAF1-204ENST00000601038 SLC16A3O15427 465 aaKnown RBP17.83■□□□□ 0.44
SCAF1-204ENST00000601038 ZNF217O75362 1048 aa17.83■□□□□ 0.44
SCAF1-204ENST00000601038 PENKP01210 267 aaPredicted RBP17.83■□□□□ 0.44
SCAF1-204ENST00000601038 RPL6Q02878 288 aaKnown RBP17.83■□□□□ 0.44
SCAF1-204ENST00000601038 EFEMP1Q12805 493 aa17.83■□□□□ 0.44
SCAF1-204ENST00000601038 CBWD6Q4V339 395 aa17.83■□□□□ 0.44
SCAF1-204ENST00000601038 CBWD3Q5JTY5 395 aa17.83■□□□□ 0.44
SCAF1-204ENST00000601038 CBWD5Q5RIA9 395 aa17.83■□□□□ 0.44
SCAF1-204ENST00000601038 TCERG1LQ5VWI1 586 aa17.83■□□□□ 0.44
SCAF1-204ENST00000601038 PEAR1Q5VY43 1037 aaPredicted RBP17.83■□□□□ 0.44
SCAF1-204ENST00000601038 KIAA1211LQ6NV74 962 aa17.83■□□□□ 0.44
SCAF1-204ENST00000601038 SLC23A3Q6PIS1 610 aa17.83■□□□□ 0.44
SCAF1-204ENST00000601038 ZC3H3Q8IXZ2 948 aaKnown RBP17.83■□□□□ 0.44
SCAF1-204ENST00000601038 P2RY11Q96G91 374 aa17.83■□□□□ 0.44
SCAF1-204ENST00000601038 SLC27A6Q9Y2P4 619 aa17.83■□□□□ 0.44
SCAF1-204ENST00000601038 PI4KAP42356 2102 aa17.83■□□□□ 0.44
SCAF1-204ENST00000601038 TNRC6BQ9UPQ9 1833 aaKnown RBP17.82■□□□□ 0.44
SCAF1-204ENST00000601038 CEACAM1P13688 526 aa17.82■□□□□ 0.44
SCAF1-204ENST00000601038 NDUFV2P19404 249 aa17.82■□□□□ 0.44
SCAF1-204ENST00000601038 CSRP1P21291 193 aaKnown RBP17.82■□□□□ 0.44
SCAF1-204ENST00000601038 ITPKAP23677 461 aa17.82■□□□□ 0.44
SCAF1-204ENST00000601038 CORO1AP31146 461 aaKnown RBP17.82■□□□□ 0.44
SCAF1-204ENST00000601038 TKTL1P51854 596 aa17.82■□□□□ 0.44
SCAF1-204ENST00000601038 YWHAGP61981 247 aaKnown RBP eCLIP17.82■□□□□ 0.44
SCAF1-204ENST00000601038 ST3GAL2Q16842 350 aa17.82■□□□□ 0.44
SCAF1-204ENST00000601038 DCAF17Q5H9S7 520 aaPredicted RBP17.82■□□□□ 0.44
SCAF1-204ENST00000601038 SH3PXD2AQ5TCZ1 1133 aa17.82■□□□□ 0.44
SCAF1-204ENST00000601038 ANKRD40Q6AI12 368 aa17.82■□□□□ 0.44
SCAF1-204ENST00000601038 PM20D1Q6GTS8 502 aa17.82■□□□□ 0.44
SCAF1-204ENST00000601038 RSRC2Q7L4I2 434 aaKnown RBP17.82■□□□□ 0.44
SCAF1-204ENST00000601038 SPATA20Q8TB22 786 aa17.82■□□□□ 0.44
SCAF1-204ENST00000601038 GTPBP4Q9BZE4 634 aaKnown RBP17.82■□□□□ 0.44
SCAF1-204ENST00000601038 MARCH2Q9P0N8 246 aa17.82■□□□□ 0.44
SCAF1-204ENST00000601038 STRIP2Q9ULQ0 834 aa17.82■□□□□ 0.44
SCAF1-204ENST00000601038 IGHV1OR15-9A0A0B4J2B8 117 aa17.81■□□□□ 0.44
SCAF1-204ENST00000601038 GOLGA6L4A6NEF3 574 aa17.81■□□□□ 0.44
SCAF1-204ENST00000601038 GIPC1O14908 333 aa17.81■□□□□ 0.44
SCAF1-204ENST00000601038 NPC1O15118 1278 aa17.81■□□□□ 0.44
SCAF1-204ENST00000601038 SMC2O95347 1197 aa17.81■□□□□ 0.44
SCAF1-204ENST00000601038 ZBED1O96006 694 aa17.81■□□□□ 0.44
SCAF1-204ENST00000601038 HMBSP08397 361 aa17.81■□□□□ 0.44
SCAF1-204ENST00000601038 PMS1P54277 932 aaKnown RBP17.81■□□□□ 0.44
SCAF1-204ENST00000601038 ZNF33AQ06730 810 aa17.81■□□□□ 0.44
SCAF1-204ENST00000601038 CUL2Q13617 745 aa17.81■□□□□ 0.44
SCAF1-204ENST00000601038 DUOXA1Q1HG43 343 aa17.81■□□□□ 0.44
SCAF1-204ENST00000601038 FYB2Q5VWT5 728 aa17.81■□□□□ 0.44
SCAF1-204ENST00000601038 ENGASEQ8NFI3 743 aa17.81■□□□□ 0.44
SCAF1-204ENST00000601038 CEP76Q8TAP6 659 aa17.81■□□□□ 0.44
SCAF1-204ENST00000601038 CACNA2D2Q9NY47 1150 aa17.81■□□□□ 0.44
SCAF1-204ENST00000601038 AGO1Q9UL18 857 aaKnown RBP17.81■□□□□ 0.44
SCAF1-204ENST00000601038 RAD54BQ9Y620 910 aa17.81■□□□□ 0.44
SCAF1-204ENST00000601038 SLC12A8A0AV02 714 aa17.8■□□□□ 0.44
SCAF1-204ENST00000601038 WASH3PC4AMC7 463 aa17.8■□□□□ 0.44
SCAF1-204ENST00000601038 XPO1O14980 1071 aaKnown RBP17.8■□□□□ 0.44
SCAF1-204ENST00000601038 KRT37O76014 449 aa17.8■□□□□ 0.44
SCAF1-204ENST00000601038 CYBBP04839 570 aa17.8■□□□□ 0.44
SCAF1-204ENST00000601038 ENGP17813 658 aa17.8■□□□□ 0.44
SCAF1-204ENST00000601038 ZNF132P52740 706 aa17.8■□□□□ 0.44
SCAF1-204ENST00000601038 BCAT1P54687 386 aa17.8■□□□□ 0.44
SCAF1-204ENST00000601038 MFAP3P55082 362 aa17.8■□□□□ 0.44
SCAF1-204ENST00000601038 YWHAEP62258 255 aaKnown RBP17.8■□□□□ 0.44
SCAF1-204ENST00000601038 LRRC63Q05C16 580 aa17.8■□□□□ 0.44
SCAF1-204ENST00000601038 PDE4CQ08493 712 aa17.8■□□□□ 0.44
SCAF1-204ENST00000601038 UAP1L1Q3KQV9 507 aa17.8■□□□□ 0.44
SCAF1-204ENST00000601038 SGO2Q562F6 1265 aa17.8■□□□□ 0.44
SCAF1-204ENST00000601038 RABEPKQ7Z6M1 372 aa17.8■□□□□ 0.44
SCAF1-204ENST00000601038 DENND1CQ8IV53 801 aa17.8■□□□□ 0.44
SCAF1-204ENST00000601038 CPXM2Q8N436 756 aa17.8■□□□□ 0.44
SCAF1-204ENST00000601038 DEFB119Q8N690 84 aa17.8■□□□□ 0.44
SCAF1-204ENST00000601038 SLC35C1Q96A29 364 aa17.8■□□□□ 0.44
SCAF1-204ENST00000601038 MRGPRX1Q96LB2 322 aa17.8■□□□□ 0.44
SCAF1-204ENST00000601038 HESX1Q9UBX0 185 aa17.8■□□□□ 0.44
SCAF1-204ENST00000601038 ARMCX3Q9UH62 379 aaPredicted RBP17.8■□□□□ 0.44
SCAF1-204ENST00000601038 TSPAN16Q9UKR8 245 aa17.8■□□□□ 0.44
SCAF1-204ENST00000601038 SLC6A14Q9UN76 642 aa17.8■□□□□ 0.44
SCAF1-204ENST00000601038 STON1Q9Y6Q2 735 aa17.8■□□□□ 0.44
SCAF1-204ENST00000601038 ASCC3Q8N3C0 2202 aaKnown RBP17.8■□□□□ 0.44
SCAF1-204ENST00000601038 CEP192Q8TEP8 1941 aa17.8■□□□□ 0.44
SCAF1-204ENST00000601038 ATXN2Q99700 1313 aaKnown RBP17.79■□□□□ 0.44
SCAF1-204ENST00000601038 EPG5Q9HCE0 2579 aa17.79■□□□□ 0.44
SCAF1-204ENST00000601038 TULP2O00295 520 aa17.79■□□□□ 0.44
SCAF1-204ENST00000601038 CFIP05156 583 aa17.79■□□□□ 0.44
SCAF1-204ENST00000601038 SERPINF2P08697 491 aa17.79■□□□□ 0.44
SCAF1-204ENST00000601038 BST2Q10589 180 aaKnown RBP17.79■□□□□ 0.44
SCAF1-204ENST00000601038 E2F5Q15329 346 aa17.79■□□□□ 0.44
SCAF1-204ENST00000601038 GOLGA7BQ2TAP0 167 aa17.79■□□□□ 0.44
SCAF1-204ENST00000601038 SLC41A1Q8IVJ1 513 aa17.79■□□□□ 0.44
SCAF1-204ENST00000601038 FAM217AQ8IXS0 508 aa17.79■□□□□ 0.44
SCAF1-204ENST00000601038 UCMAQ8WVF2 138 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms