RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 ACSF2Q96CM8 615 aaPredicted RBP23.92■■□□□ 1.42
IRF3-227ENST00000600911 ATXN3LQ9H3M9 355 aa23.92■■□□□ 1.42
IRF3-227ENST00000600911 SMOC2Q9H3U7 446 aa23.92■■□□□ 1.42
IRF3-227ENST00000600911 DZANK1Q9NVP4 752 aa23.92■■□□□ 1.42
IRF3-227ENST00000600911 EHD2Q9NZN4 543 aa23.92■■□□□ 1.42
IRF3-227ENST00000600911 PCSK1NQ9UHG2 260 aa23.92■■□□□ 1.42
IRF3-227ENST00000600911 XYLBO75191 536 aa23.91■■□□□ 1.42
IRF3-227ENST00000600911 MAN1A1P33908 653 aa23.91■■□□□ 1.42
IRF3-227ENST00000600911 PSEN1P49768 467 aa23.91■■□□□ 1.42
IRF3-227ENST00000600911 TEAD2Q15562 447 aa23.91■■□□□ 1.42
IRF3-227ENST00000600911 IFI16Q16666 785 aaKnown RBP23.91■■□□□ 1.42
IRF3-227ENST00000600911 C10orf120Q5SQS8 335 aa23.91■■□□□ 1.42
IRF3-227ENST00000600911 MEI1Q5TIA1 1274 aa23.91■■□□□ 1.42
IRF3-227ENST00000600911 TRIM58Q8NG06 486 aa23.91■■□□□ 1.42
IRF3-227ENST00000600911 TLR10Q9BXR5 811 aa23.91■■□□□ 1.42
IRF3-227ENST00000600911 TRPC7Q9HCX4 862 aa23.91■■□□□ 1.42
IRF3-227ENST00000600911 DDIT4Q9NX09 232 aa23.91■■□□□ 1.42
IRF3-227ENST00000600911 DPP7Q9UHL4 492 aa23.91■■□□□ 1.42
IRF3-227ENST00000600911 RASAL2Q9UJF2 1139 aa23.91■■□□□ 1.42
IRF3-227ENST00000600911 DENND4AQ7Z401 1863 aa23.9■■□□□ 1.42
IRF3-227ENST00000600911 DDX3YO15523 660 aaKnown RBP23.9■■□□□ 1.42
IRF3-227ENST00000600911 IRAK2O43187 625 aa23.9■■□□□ 1.42
IRF3-227ENST00000600911 CEBPBP17676 345 aa23.9■■□□□ 1.42
IRF3-227ENST00000600911 DNA2P51530 1060 aa23.9■■□□□ 1.42
IRF3-227ENST00000600911 ETF1P62495 437 aaKnown RBP23.9■■□□□ 1.42
IRF3-227ENST00000600911 PABPC1LQ4VXU2 614 aaKnown RBP23.9■■□□□ 1.42
IRF3-227ENST00000600911 RSRC2Q7L4I2 434 aaKnown RBP23.9■■□□□ 1.42
IRF3-227ENST00000600911 FAM131BQ86XD5 332 aa23.9■■□□□ 1.42
IRF3-227ENST00000600911 CCDC185Q8N715 623 aa23.9■■□□□ 1.42
IRF3-227ENST00000600911 ING5Q8WYH8 240 aa23.9■■□□□ 1.42
IRF3-227ENST00000600911 GAS2L1Q99501 681 aaPredicted RBP23.9■■□□□ 1.42
IRF3-227ENST00000600911 S1PR5Q9H228 398 aa23.9■■□□□ 1.42
IRF3-227ENST00000600911 FAM204AQ9H8W3 233 aa23.9■■□□□ 1.42
IRF3-227ENST00000600911 KLHL11Q9NVR0 708 aa23.9■■□□□ 1.42
IRF3-227ENST00000600911 STAP1Q9ULZ2 295 aa23.9■■□□□ 1.42
IRF3-227ENST00000600911 DOCK8Q8NF50 2099 aa23.89■■□□□ 1.42
IRF3-227ENST00000600911 RALAP11233 206 aa23.89■■□□□ 1.42
IRF3-227ENST00000600911 GJC1P36383 396 aa23.89■■□□□ 1.42
IRF3-227ENST00000600911 CCDC85BQ15834 202 aaPredicted RBP23.89■■□□□ 1.42
IRF3-227ENST00000600911 HECTD3Q5T447 861 aa23.89■■□□□ 1.42
IRF3-227ENST00000600911 EP400NLQ6ZTU2 488 aa23.89■■□□□ 1.42
IRF3-227ENST00000600911 PDZD4Q76G19 769 aaPredicted RBP23.89■■□□□ 1.42
IRF3-227ENST00000600911 STRADAQ7RTN6 431 aa23.89■■□□□ 1.42
IRF3-227ENST00000600911 PEX26Q7Z412 305 aa23.89■■□□□ 1.42
IRF3-227ENST00000600911 GPR149Q86SP6 731 aa23.89■■□□□ 1.42
IRF3-227ENST00000600911 MIB1Q86YT6 1006 aa23.89■■□□□ 1.42
IRF3-227ENST00000600911 ARL14EPQ8N8R7 260 aaPredicted RBP23.89■■□□□ 1.42
IRF3-227ENST00000600911 MAB21L3Q8N8X9 362 aa23.89■■□□□ 1.42
IRF3-227ENST00000600911 RNF139Q8WU17 664 aa23.89■■□□□ 1.42
IRF3-227ENST00000600911 PGAP3Q96FM1 320 aaPredicted RBP23.89■■□□□ 1.42
IRF3-227ENST00000600911 ZFRQ96KR1 1074 aaKnown RBP23.89■■□□□ 1.42
IRF3-227ENST00000600911 ALS2CR12Q96Q35 445 aa23.89■■□□□ 1.42
IRF3-227ENST00000600911 SLC46A2Q9BY10 475 aa23.89■■□□□ 1.42
IRF3-227ENST00000600911 PIDD1Q9HB75 910 aa23.89■■□□□ 1.42
IRF3-227ENST00000600911 GPATCH2LQ9NWQ4 482 aa23.89■■□□□ 1.42
IRF3-227ENST00000600911 DNAI1Q9UI46 699 aa23.89■■□□□ 1.42
IRF3-227ENST00000600911 SPOPO43791 374 aa23.88■■□□□ 1.41
IRF3-227ENST00000600911 DEUP1Q05D60 604 aa23.88■■□□□ 1.41
IRF3-227ENST00000600911 CLUL1Q15846 466 aa23.88■■□□□ 1.41
IRF3-227ENST00000600911 SMTNL2Q2TAL5 461 aa23.88■■□□□ 1.41
IRF3-227ENST00000600911 KCNT1Q5JUK3 1230 aa23.88■■□□□ 1.41
IRF3-227ENST00000600911 ALG3Q92685 438 aa23.88■■□□□ 1.41
IRF3-227ENST00000600911 MSLNLQ96KJ4 702 aa23.88■■□□□ 1.41
IRF3-227ENST00000600911 ZSWIM3Q96MP5 696 aa23.88■■□□□ 1.41
IRF3-227ENST00000600911 SMG9Q9H0W8 520 aaKnown RBP23.88■■□□□ 1.41
IRF3-227ENST00000600911 ZWILCHQ9H900 591 aa23.88■■□□□ 1.41
IRF3-227ENST00000600911 OLFM2O95897 454 aa23.88■■□□□ 1.41
IRF3-227ENST00000600911 HMBSP08397 361 aa23.88■■□□□ 1.41
IRF3-227ENST00000600911 CDC25CP30307 473 aa23.88■■□□□ 1.41
IRF3-227ENST00000600911 RDXP35241 583 aaKnown RBP23.88■■□□□ 1.41
IRF3-227ENST00000600911 CA9Q16790 459 aa23.88■■□□□ 1.41
IRF3-227ENST00000600911 DCAF12L1Q5VU92 463 aa23.88■■□□□ 1.41
IRF3-227ENST00000600911 SCYL2Q6P3W7 929 aa23.88■■□□□ 1.41
IRF3-227ENST00000600911 ZNF276Q8N554 614 aa23.88■■□□□ 1.41
IRF3-227ENST00000600911 DEFB123Q8N688 67 aa23.88■■□□□ 1.41
IRF3-227ENST00000600911 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.88■■□□□ 1.41
IRF3-227ENST00000600911 HES6Q96HZ4 224 aa23.88■■□□□ 1.41
IRF3-227ENST00000600911 PSMB7Q99436 277 aa23.88■■□□□ 1.41
IRF3-227ENST00000600911 GKN1Q9NS71 199 aa23.88■■□□□ 1.41
IRF3-227ENST00000600911 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.88■■□□□ 1.416e-9■■■■□ 20.1
IRF3-227ENST00000600911 MARCH2Q9P0N8 246 aa23.88■■□□□ 1.41
IRF3-227ENST00000600911 XPO7Q9UIA9 1087 aaKnown RBP23.88■■□□□ 1.41
IRF3-227ENST00000600911 AMFRQ9UKV5 643 aa23.88■■□□□ 1.41
IRF3-227ENST00000600911 USP18Q9UMW8 372 aa23.88■■□□□ 1.41
IRF3-227ENST00000600911 SSR1P43307 286 aaKnown RBP23.87■■□□□ 1.41
IRF3-227ENST00000600911 PPP3CCP48454 512 aa23.87■■□□□ 1.41
IRF3-227ENST00000600911 PEX5P50542 639 aa23.87■■□□□ 1.41
IRF3-227ENST00000600911 TUBP50607 506 aa23.87■■□□□ 1.41
IRF3-227ENST00000600911 CBX2Q14781 532 aaPredicted RBP23.87■■□□□ 1.41
IRF3-227ENST00000600911 ZC3H12AQ5D1E8 599 aaKnown RBP23.87■■□□□ 1.41
IRF3-227ENST00000600911 AADACL2Q6P093 401 aa23.87■■□□□ 1.41
IRF3-227ENST00000600911 ANKS1BQ7Z6G8 1248 aa23.87■■□□□ 1.41
IRF3-227ENST00000600911 SYCE1Q8N0S2 351 aa23.87■■□□□ 1.41
IRF3-227ENST00000600911 RIN3Q8TB24 985 aa23.87■■□□□ 1.41
IRF3-227ENST00000600911 ADAMTS19Q8TE59 1207 aa23.87■■□□□ 1.41
IRF3-227ENST00000600911 SLC39A13Q96H72 371 aa23.87■■□□□ 1.41
IRF3-227ENST00000600911 FCRL2Q96LA5 508 aaPredicted RBP23.87■■□□□ 1.41
IRF3-227ENST00000600911 SMPD4Q9NXE4 827 aa23.87■■□□□ 1.41
IRF3-227ENST00000600911 SNX10Q9Y5X0 201 aa23.87■■□□□ 1.41
IRF3-227ENST00000600911 NUP210Q8TEM1 1887 aaPredicted RBP23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms