RNA–Protein interactions for RNA: ENST00000600689.1

UPF1-210, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-210ENST00000600689 FOLH1Q04609 750 aa18.98■□□□□ 0.63
UPF1-210ENST00000600689 TMEM132AQ24JP5 1023 aa18.98■□□□□ 0.63
UPF1-210ENST00000600689 VSIG10LQ86VR7 867 aa18.98■□□□□ 0.63
UPF1-210ENST00000600689 WDR75Q8IWA0 830 aaKnown RBP18.98■□□□□ 0.63
UPF1-210ENST00000600689 NME8Q8N427 588 aa18.98■□□□□ 0.63
UPF1-210ENST00000600689 TTC13Q8NBP0 860 aa18.98■□□□□ 0.63
UPF1-210ENST00000600689 CEP70Q8NHQ1 597 aa18.98■□□□□ 0.63
UPF1-210ENST00000600689 UBA3Q8TBC4 463 aa18.98■□□□□ 0.63
UPF1-210ENST00000600689 OLFM3Q96PB7 478 aa18.98■□□□□ 0.63
UPF1-210ENST00000600689 PICK1Q9NRD5 415 aa18.98■□□□□ 0.63
UPF1-210ENST00000600689 ZNF214Q9UL59 606 aaPredicted RBP18.98■□□□□ 0.63
UPF1-210ENST00000600689 NFASCO94856 1347 aa18.98■□□□□ 0.63
UPF1-210ENST00000600689 CFLARO15519 480 aa18.97■□□□□ 0.63
UPF1-210ENST00000600689 NELFEP18615 380 aaKnown RBP18.97■□□□□ 0.63
UPF1-210ENST00000600689 CPOXP36551 454 aa18.97■□□□□ 0.63
UPF1-210ENST00000600689 HACE1Q8IYU2 909 aa18.97■□□□□ 0.63
UPF1-210ENST00000600689 PHTF2Q8N3S3 785 aa18.97■□□□□ 0.63
UPF1-210ENST00000600689 REPS2Q8NFH8 660 aa18.97■□□□□ 0.63
UPF1-210ENST00000600689 USP18Q9UMW8 372 aa18.97■□□□□ 0.63
UPF1-210ENST00000600689 CNTNAP2Q9UHC6 1331 aa18.97■□□□□ 0.63
UPF1-210ENST00000600689 KIAA1217Q5T5P2 1943 aa18.97■□□□□ 0.63
UPF1-210ENST00000600689 C15orf38-AP3S2A0A0A6YYH1 394 aa18.97■□□□□ 0.63
UPF1-210ENST00000600689 CSDE1O75534 798 aaKnown RBP18.97■□□□□ 0.63
UPF1-210ENST00000600689 DGAT1O75907 488 aa18.97■□□□□ 0.63
UPF1-210ENST00000600689 LSAMPQ13449 338 aa18.97■□□□□ 0.63
UPF1-210ENST00000600689 EMC2Q15006 297 aa18.97■□□□□ 0.63
UPF1-210ENST00000600689 TEX44Q53QW1 395 aa18.97■□□□□ 0.63
UPF1-210ENST00000600689 FAM102AQ5T9C2 384 aaPredicted RBP18.97■□□□□ 0.63
UPF1-210ENST00000600689 ARPINQ7Z6K5 226 aa18.97■□□□□ 0.63
UPF1-210ENST00000600689 ZNF778Q96MU6 729 aa18.97■□□□□ 0.63
UPF1-210ENST00000600689 C7orf26Q96N11 449 aa18.97■□□□□ 0.63
UPF1-210ENST00000600689 NTPCRQ9BSD7 190 aaKnown RBP18.97■□□□□ 0.63
UPF1-210ENST00000600689 RNPEPQ9H4A4 650 aa18.97■□□□□ 0.63
UPF1-210ENST00000600689 PARP14Q460N5 1801 aa18.97■□□□□ 0.63
UPF1-210ENST00000600689 GOLGA8QA0A0J9YX86 632 aa18.97■□□□□ 0.63
UPF1-210ENST00000600689 GOLGA8OA6NCC3 632 aa18.97■□□□□ 0.63
UPF1-210ENST00000600689 GOLGA8NF8WBI6 632 aa18.97■□□□□ 0.63
UPF1-210ENST00000600689 BPGMP07738 259 aa18.97■□□□□ 0.63
UPF1-210ENST00000600689 SERPINA6P08185 405 aa18.97■□□□□ 0.63
UPF1-210ENST00000600689 ADORA2AP29274 412 aa18.97■□□□□ 0.63
UPF1-210ENST00000600689 ABCG1P45844 678 aa18.97■□□□□ 0.63
UPF1-210ENST00000600689 MAP7Q14244 749 aa18.97■□□□□ 0.63
UPF1-210ENST00000600689 KRT81Q14533 505 aa18.97■□□□□ 0.63
UPF1-210ENST00000600689 ICA1LQ8NDH6 482 aa18.97■□□□□ 0.63
UPF1-210ENST00000600689 ATP6V0A1Q93050 837 aa18.97■□□□□ 0.63
UPF1-210ENST00000600689 PEBP4Q96S96 227 aa18.97■□□□□ 0.63
UPF1-210ENST00000600689 ZNF358Q9NW07 568 aa18.97■□□□□ 0.63
UPF1-210ENST00000600689 ARHGAP28Q9P2N2 729 aa18.97■□□□□ 0.63
UPF1-210ENST00000600689 TCRBV5S1A1TA0A578 114 aa18.96■□□□□ 0.63
UPF1-210ENST00000600689 APOC4-APOC2K7ER74 178 aa18.96■□□□□ 0.63
UPF1-210ENST00000600689 AIM2O14862 343 aa18.96■□□□□ 0.63
UPF1-210ENST00000600689 FKBP6O75344 327 aa18.96■□□□□ 0.63
UPF1-210ENST00000600689 ZBED1O96006 694 aa18.96■□□□□ 0.63
UPF1-210ENST00000600689 APOC2P02655 101 aa18.96■□□□□ 0.63
UPF1-210ENST00000600689 PMLP29590 882 aa18.96■□□□□ 0.63
UPF1-210ENST00000600689 BRCA1P38398 1863 aaKnown RBP18.96■□□□□ 0.63
UPF1-210ENST00000600689 PPM1JQ5JR12 505 aa18.96■□□□□ 0.63
UPF1-210ENST00000600689 N4BP2L1Q5TBK1 243 aaPredicted RBP18.96■□□□□ 0.63
UPF1-210ENST00000600689 LGSNQ5TDP6 509 aa18.96■□□□□ 0.63
UPF1-210ENST00000600689 CES3Q6UWW8 571 aa18.96■□□□□ 0.63
UPF1-210ENST00000600689 UNC5AQ6ZN44 842 aa18.96■□□□□ 0.63
UPF1-210ENST00000600689 CGRRF1Q99675 332 aa18.96■□□□□ 0.63
UPF1-210ENST00000600689 FZD9O00144 591 aa18.96■□□□□ 0.63
UPF1-210ENST00000600689 SIN3BO75182 1162 aa18.96■□□□□ 0.63
UPF1-210ENST00000600689 ERBB2P04626 1255 aa18.96■□□□□ 0.63
UPF1-210ENST00000600689 SRGAP2CP0DJJ0 459 aa18.96■□□□□ 0.63
UPF1-210ENST00000600689 FSTL1Q12841 308 aa18.96■□□□□ 0.63
UPF1-210ENST00000600689 TMED1Q13445 227 aa18.96■□□□□ 0.63
UPF1-210ENST00000600689 ZC3H12AQ5D1E8 599 aaKnown RBP18.96■□□□□ 0.63
UPF1-210ENST00000600689 TMCO4Q5TGY1 634 aa18.96■□□□□ 0.63
UPF1-210ENST00000600689 ADGRF2Q8IZF7 708 aa18.96■□□□□ 0.63
UPF1-210ENST00000600689 MCPH1Q8NEM0 835 aa18.96■□□□□ 0.63
UPF1-210ENST00000600689 ADAM32Q8TC27 787 aa18.96■□□□□ 0.63
UPF1-210ENST00000600689 NGRNQ9NPE2 291 aaKnown RBP18.96■□□□□ 0.63
UPF1-210ENST00000600689 MAP3K20Q9NYL2 800 aaKnown RBP18.96■□□□□ 0.63
UPF1-210ENST00000600689 ATXN10Q9UBB4 475 aa18.96■□□□□ 0.63
UPF1-210ENST00000600689 CDH22Q9UJ99 828 aa18.96■□□□□ 0.63
UPF1-210ENST00000600689 POMPQ9Y244 141 aa18.96■□□□□ 0.63
UPF1-210ENST00000600689 COMMD3-BMI1R4GMX3 469 aa18.96■□□□□ 0.63
UPF1-210ENST00000600689 SPDYE16A6NNV3 312 aaPredicted RBP18.95■□□□□ 0.62
UPF1-210ENST00000600689 NEMP1O14524 444 aa18.95■□□□□ 0.62
UPF1-210ENST00000600689 KRT38O76015 456 aa18.95■□□□□ 0.62
UPF1-210ENST00000600689 FAM200BP0CF97 657 aa18.95■□□□□ 0.62
UPF1-210ENST00000600689 TCN1P20061 433 aaPredicted RBP18.95■□□□□ 0.62
UPF1-210ENST00000600689 CCND2P30279 289 aa18.95■□□□□ 0.62
UPF1-210ENST00000600689 SFNP31947 248 aa18.95■□□□□ 0.62
UPF1-210ENST00000600689 TBL3Q12788 808 aaKnown RBP18.95■□□□□ 0.62
UPF1-210ENST00000600689 ACAP1Q15027 740 aa18.95■□□□□ 0.62
UPF1-210ENST00000600689 R3HDM1Q15032 1099 aaKnown RBP18.95■□□□□ 0.62
UPF1-210ENST00000600689 ATG14Q6ZNE5 492 aa18.95■□□□□ 0.62
UPF1-210ENST00000600689 FRMD7Q6ZUT3 714 aa18.95■□□□□ 0.62
UPF1-210ENST00000600689 TMEM174Q8WUU8 243 aa18.95■□□□□ 0.62
UPF1-210ENST00000600689 OXCT2Q9BYC2 517 aaPredicted RBP18.95■□□□□ 0.62
UPF1-210ENST00000600689 CEP41Q9BYV8 373 aa18.95■□□□□ 0.62
UPF1-210ENST00000600689 MAGEB5Q9BZ81 275 aa18.95■□□□□ 0.62
UPF1-210ENST00000600689 FETUBQ9UGM5 382 aa18.95■□□□□ 0.62
UPF1-210ENST00000600689 RLFQ13129 1914 aa18.95■□□□□ 0.62
UPF1-210ENST00000600689 SDR42E2A6NKP2 422 aa18.95■□□□□ 0.62
UPF1-210ENST00000600689 SLC1A6P48664 564 aa18.95■□□□□ 0.62
UPF1-210ENST00000600689 ZNF699Q32M78 642 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms