RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 HSPA12BQ96MM6 686 aa15.44■□□□□ 0.06
IRF3-223ENST00000599223 NUSAP1Q9BXS6 441 aaKnown RBP15.44■□□□□ 0.06
IRF3-223ENST00000599223 ADAM33Q9BZ11 813 aa15.44■□□□□ 0.06
IRF3-223ENST00000599223 IMPG2Q9BZV3 1241 aa15.44■□□□□ 0.06
IRF3-223ENST00000599223 DNMT3LQ9UJW3 386 aa15.44■□□□□ 0.06
IRF3-223ENST00000599223 LSM7Q9UK45 103 aaKnown RBP15.44■□□□□ 0.06
IRF3-223ENST00000599223 USP3Q9Y6I4 520 aa15.44■□□□□ 0.06
IRF3-223ENST00000599223 PKD1L2Q7Z442 2459 aa15.44■□□□□ 0.06
IRF3-223ENST00000599223 SPAARA0A1B0GVQ0 90 aa15.43■□□□□ 0.06
IRF3-223ENST00000599223 AP5Z1O43299 807 aa15.43■□□□□ 0.06
IRF3-223ENST00000599223 HOXD12P35452 270 aa15.43■□□□□ 0.06
IRF3-223ENST00000599223 ZNF33AQ06730 810 aa15.43■□□□□ 0.06
IRF3-223ENST00000599223 GOLGA8FQ08AF8 430 aa15.43■□□□□ 0.06
IRF3-223ENST00000599223 GOLGA8DPQ0D2H9 430 aa15.43■□□□□ 0.06
IRF3-223ENST00000599223 PREPLQ4J6C6 727 aaPredicted RBP15.43■□□□□ 0.06
IRF3-223ENST00000599223 PIP4P1Q86T03 277 aa15.43■□□□□ 0.06
IRF3-223ENST00000599223 SPATA32Q96LK8 384 aa15.43■□□□□ 0.06
IRF3-223ENST00000599223 GBP4Q96PP9 640 aa15.43■□□□□ 0.06
IRF3-223ENST00000599223 XPO6Q96QU8 1125 aaKnown RBP15.43■□□□□ 0.06
IRF3-223ENST00000599223 DUSP16Q9BY84 665 aa15.43■□□□□ 0.06
IRF3-223ENST00000599223 TMEM8AQ9HCN3 771 aa15.43■□□□□ 0.06
IRF3-223ENST00000599223 WDR35Q9P2L0 1181 aa15.43■□□□□ 0.06
IRF3-223ENST00000599223 KIF20AO95235 890 aa15.42■□□□□ 0.06
IRF3-223ENST00000599223 PENKP01210 267 aaPredicted RBP15.42■□□□□ 0.06
IRF3-223ENST00000599223 HMBSP08397 361 aa15.42■□□□□ 0.06
IRF3-223ENST00000599223 MFAP3P55082 362 aa15.42■□□□□ 0.06
IRF3-223ENST00000599223 FAM193AP78312 1265 aa15.42■□□□□ 0.06
IRF3-223ENST00000599223 SEMA3BQ13214 749 aa15.42■□□□□ 0.06
IRF3-223ENST00000599223 BYSLQ13895 437 aaKnown RBP15.42■□□□□ 0.06
IRF3-223ENST00000599223 NUMA1Q14980 2115 aa15.42■□□□□ 0.06
IRF3-223ENST00000599223 GEN1Q17RS7 908 aa15.42■□□□□ 0.06
IRF3-223ENST00000599223 FYB2Q5VWT5 728 aa15.42■□□□□ 0.06
IRF3-223ENST00000599223 KRBA2Q6ZNG9 492 aa15.42■□□□□ 0.06
IRF3-223ENST00000599223 GUF1Q8N442 669 aaKnown RBP15.42■□□□□ 0.06
IRF3-223ENST00000599223 TRIML1Q8N9V2 468 aa15.42■□□□□ 0.06
IRF3-223ENST00000599223 GATA6Q92908 595 aa15.42■□□□□ 0.06
IRF3-223ENST00000599223 SCNM1Q9BWG6 230 aa15.42■□□□□ 0.06
IRF3-223ENST00000599223 GTPBP2Q9BX10 602 aaKnown RBP15.42■□□□□ 0.06
IRF3-223ENST00000599223 RASAL2Q9UJF2 1139 aa15.42■□□□□ 0.06
IRF3-223ENST00000599223 FBXO10Q9UK96 956 aa15.42■□□□□ 0.06
IRF3-223ENST00000599223 CLEC4EQ9ULY5 219 aa15.42■□□□□ 0.06
IRF3-223ENST00000599223 TULP2O00295 520 aa15.41■□□□□ 0.06
IRF3-223ENST00000599223 HYAL3O43820 417 aaPredicted RBP15.41■□□□□ 0.06
IRF3-223ENST00000599223 SERPINF2P08697 491 aa15.41■□□□□ 0.06
IRF3-223ENST00000599223 KRT13P13646 458 aa15.41■□□□□ 0.06
IRF3-223ENST00000599223 CORO1AP31146 461 aaKnown RBP15.41■□□□□ 0.06
IRF3-223ENST00000599223 PLA2G4AP47712 749 aa15.41■□□□□ 0.06
IRF3-223ENST00000599223 MXI1P50539 228 aa15.41■□□□□ 0.06
IRF3-223ENST00000599223 RAD23BP54727 409 aa15.41■□□□□ 0.06
IRF3-223ENST00000599223 KRT85P78386 507 aa15.41■□□□□ 0.06
IRF3-223ENST00000599223 EFEMP1Q12805 493 aa15.41■□□□□ 0.06
IRF3-223ENST00000599223 DUOXA1Q1HG43 343 aa15.41■□□□□ 0.06
IRF3-223ENST00000599223 FUT11Q495W5 492 aa15.41■□□□□ 0.06
IRF3-223ENST00000599223 KIAA1324Q6UXG2 1013 aaKnown RBP15.41■□□□□ 0.06
IRF3-223ENST00000599223 SLC36A4Q6YBV0 504 aa15.41■□□□□ 0.06
IRF3-223ENST00000599223 NUDT18Q6ZVK8 323 aa15.41■□□□□ 0.06
IRF3-223ENST00000599223 BHLHA9Q7RTU4 235 aa15.41■□□□□ 0.06
IRF3-223ENST00000599223 PIGZQ86VD9 579 aa15.41■□□□□ 0.06
IRF3-223ENST00000599223 MINDY1Q8N5J2 469 aa15.41■□□□□ 0.06
IRF3-223ENST00000599223 SLC4A11Q8NBS3 891 aa15.41■□□□□ 0.06
IRF3-223ENST00000599223 MKRN2Q9H000 416 aaKnown RBP15.41■□□□□ 0.06
IRF3-223ENST00000599223 CISHQ9NSE2 258 aa15.41■□□□□ 0.06
IRF3-223ENST00000599223 CLIC5Q9NZA1 410 aa15.41■□□□□ 0.06
IRF3-223ENST00000599223 ZMIZ1Q9ULJ6 1067 aa15.41■□□□□ 0.06
IRF3-223ENST00000599223 SLC6A14Q9UN76 642 aa15.41■□□□□ 0.06
IRF3-223ENST00000599223 STON1Q9Y6Q2 735 aa15.41■□□□□ 0.06
IRF3-223ENST00000599223 PSMC2P35998 433 aaKnown RBP15.4■□□□□ 0.06
IRF3-223ENST00000599223 DPP6P42658 865 aa15.4■□□□□ 0.06
IRF3-223ENST00000599223 IL12RB1P42701 662 aa15.4■□□□□ 0.06
IRF3-223ENST00000599223 MCCD1P59942 119 aaPredicted RBP15.4■□□□□ 0.06
IRF3-223ENST00000599223 ENPEPQ07075 957 aa15.4■□□□□ 0.06
IRF3-223ENST00000599223 ADAM9Q13443 819 aa15.4■□□□□ 0.06
IRF3-223ENST00000599223 KRT39Q6A163 491 aa15.4■□□□□ 0.06
IRF3-223ENST00000599223 ZNF276Q8N554 614 aa15.4■□□□□ 0.06
IRF3-223ENST00000599223 RBBP8NLQ8NC74 664 aaPredicted RBP15.4■□□□□ 0.06
IRF3-223ENST00000599223 NDRG1Q92597 394 aaKnown RBP15.4■□□□□ 0.06
IRF3-223ENST00000599223 TATDN2Q93075 761 aa15.4■□□□□ 0.06
IRF3-223ENST00000599223 GDPD2Q9HCC8 539 aa15.4■□□□□ 0.06
IRF3-223ENST00000599223 KLK13Q9UKR3 277 aa15.4■□□□□ 0.06
IRF3-223ENST00000599223 AGO1Q9UL18 857 aaKnown RBP15.4■□□□□ 0.06
IRF3-223ENST00000599223 SLC27A6Q9Y2P4 619 aa15.4■□□□□ 0.06
IRF3-223ENST00000599223 GOLGA6L22H0YM25 854 aa15.39■□□□□ 0.05
IRF3-223ENST00000599223 ZNF217O75362 1048 aa15.39■□□□□ 0.05
IRF3-223ENST00000599223 RALAP11233 206 aa15.39■□□□□ 0.05
IRF3-223ENST00000599223 CD59P13987 128 aa15.39■□□□□ 0.05
IRF3-223ENST00000599223 PTMSP20962 102 aa15.39■□□□□ 0.05
IRF3-223ENST00000599223 PRKCHP24723 683 aa15.39■□□□□ 0.05
IRF3-223ENST00000599223 MAOBP27338 520 aa15.39■□□□□ 0.05
IRF3-223ENST00000599223 PSEN1P49768 467 aa15.39■□□□□ 0.05
IRF3-223ENST00000599223 SIM1P81133 766 aaPredicted RBP15.39■□□□□ 0.05
IRF3-223ENST00000599223 GFPT1Q06210 699 aaPredicted RBP15.39■□□□□ 0.05
IRF3-223ENST00000599223 ENPP2Q13822 863 aa15.39■□□□□ 0.05
IRF3-223ENST00000599223 CBWD6Q4V339 395 aa15.39■□□□□ 0.05
IRF3-223ENST00000599223 RAB41Q5JT25 222 aa15.39■□□□□ 0.05
IRF3-223ENST00000599223 CBWD3Q5JTY5 395 aa15.39■□□□□ 0.05
IRF3-223ENST00000599223 CBWD5Q5RIA9 395 aa15.39■□□□□ 0.05
IRF3-223ENST00000599223 TMEM215Q68D42 235 aa15.39■□□□□ 0.05
IRF3-223ENST00000599223 CACUL1Q86Y37 369 aa15.39■□□□□ 0.05
IRF3-223ENST00000599223 DENND1CQ8IV53 801 aa15.39■□□□□ 0.05
IRF3-223ENST00000599223 KDF1Q8NAX2 398 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms