RNA–Protein interactions for RNA: ENST00000598938.1

LIG1-216, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-216ENST00000598938 POPDC2Q9HBU9 364 aa19.01■□□□□ 0.63
LIG1-216ENST00000598938 ZNHIT6Q9NWK9 470 aaKnown RBP19.01■□□□□ 0.63
LIG1-216ENST00000598938 SMPD4Q9NXE4 827 aa19.01■□□□□ 0.63
LIG1-216ENST00000598938 TAS2R14Q9NYV8 317 aa19.01■□□□□ 0.63
LIG1-216ENST00000598938 MIA3Q5JRA6 1907 aa19.01■□□□□ 0.63
LIG1-216ENST00000598938 LEFTY2O00292 366 aa19■□□□□ 0.63
LIG1-216ENST00000598938 MDM4O15151 490 aa19■□□□□ 0.63
LIG1-216ENST00000598938 NARSO43776 548 aaKnown RBP19■□□□□ 0.63
LIG1-216ENST00000598938 GZMAP12544 262 aa19■□□□□ 0.63
LIG1-216ENST00000598938 PSMC3P17980 439 aa19■□□□□ 0.63
LIG1-216ENST00000598938 GSCP56915 257 aaPredicted RBP19■□□□□ 0.63
LIG1-216ENST00000598938 YWHAZP63104 245 aaKnown RBP19■□□□□ 0.63
LIG1-216ENST00000598938 C1QBPQ07021 282 aaKnown RBP19■□□□□ 0.63
LIG1-216ENST00000598938 TSR1Q2NL82 804 aaKnown RBP19■□□□□ 0.63
LIG1-216ENST00000598938 RSRC2Q7L4I2 434 aaKnown RBP19■□□□□ 0.63
LIG1-216ENST00000598938 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19■□□□□ 0.63
LIG1-216ENST00000598938 DDX42Q86XP3 938 aaKnown RBP eCLIP19■□□□□ 0.63
LIG1-216ENST00000598938 RNF139Q8WU17 664 aa19■□□□□ 0.63
LIG1-216ENST00000598938 SLC2A13Q96QE2 648 aa19■□□□□ 0.63
LIG1-216ENST00000598938 C11orf70Q9BRQ4 267 aa19■□□□□ 0.63
LIG1-216ENST00000598938 TBC1D17Q9HA65 648 aa19■□□□□ 0.63
LIG1-216ENST00000598938 ADAM22Q9P0K1 906 aa19■□□□□ 0.63
LIG1-216ENST00000598938 FRYLO94915 3013 aa19■□□□□ 0.63
LIG1-216ENST00000598938 KIF26AQ9ULI4 1882 aaPredicted RBP18.99■□□□□ 0.63
LIG1-216ENST00000598938 CEP250Q9BV73 2442 aa18.99■□□□□ 0.63
LIG1-216ENST00000598938 GOLGA6L3A6NEY3 463 aa18.99■□□□□ 0.63
LIG1-216ENST00000598938 STK25O00506 426 aa18.99■□□□□ 0.63
LIG1-216ENST00000598938 HSF2BPO75031 334 aa18.99■□□□□ 0.63
LIG1-216ENST00000598938 CALB1P05937 261 aa18.99■□□□□ 0.63
LIG1-216ENST00000598938 NCAM1P13591 858 aa18.99■□□□□ 0.63
LIG1-216ENST00000598938 EFEMP1Q12805 493 aa18.99■□□□□ 0.63
LIG1-216ENST00000598938 MAPK8IP2Q13387 824 aaPredicted RBP18.99■□□□□ 0.63
LIG1-216ENST00000598938 GRM2Q14416 872 aa18.99■□□□□ 0.63
LIG1-216ENST00000598938 PUM1Q14671 1186 aaKnown RBP eCLIP18.99■□□□□ 0.63
LIG1-216ENST00000598938 DGLUCYQ7Z3D6 616 aa18.99■□□□□ 0.63
LIG1-216ENST00000598938 VPS36Q86VN1 386 aa18.99■□□□□ 0.63
LIG1-216ENST00000598938 KIAA1958Q8N8K9 716 aa18.99■□□□□ 0.63
LIG1-216ENST00000598938 RMDN1Q96DB5 314 aa18.99■□□□□ 0.63
LIG1-216ENST00000598938 TRMT61BQ9BVS5 477 aaKnown RBP18.99■□□□□ 0.63
LIG1-216ENST00000598938 GRPEL1Q9HAV7 217 aa18.99■□□□□ 0.63
LIG1-216ENST00000598938 GKN1Q9NS71 199 aa18.99■□□□□ 0.63
LIG1-216ENST00000598938 MARCH2Q9P0N8 246 aa18.99■□□□□ 0.63
LIG1-216ENST00000598938 WDR35Q9P2L0 1181 aa18.99■□□□□ 0.63
LIG1-216ENST00000598938 ADAMTS1Q9UHI8 967 aa18.99■□□□□ 0.63
LIG1-216ENST00000598938 RASAL2Q9UJF2 1139 aa18.99■□□□□ 0.63
LIG1-216ENST00000598938 STRIP2Q9ULQ0 834 aa18.99■□□□□ 0.63
LIG1-216ENST00000598938 NAALADL1Q9UQQ1 740 aa18.99■□□□□ 0.63
LIG1-216ENST00000598938 SSU72P8A0A1W2PR75 194 aa18.98■□□□□ 0.63
LIG1-216ENST00000598938 RTN2O75298 545 aa18.98■□□□□ 0.63
LIG1-216ENST00000598938 DAB1O75553 588 aa18.98■□□□□ 0.63
LIG1-216ENST00000598938 EIF4A3P38919 411 aaKnown RBP18.98■□□□□ 0.63
LIG1-216ENST00000598938 CDK17Q00537 523 aa18.98■□□□□ 0.63
LIG1-216ENST00000598938 MTF1Q14872 753 aa18.98■□□□□ 0.63
LIG1-216ENST00000598938 ASTE1Q2TB18 679 aaPredicted RBP18.98■□□□□ 0.63
LIG1-216ENST00000598938 FAM102AQ5T9C2 384 aaPredicted RBP18.98■□□□□ 0.63
LIG1-216ENST00000598938 SYPL2Q5VXT5 272 aa18.98■□□□□ 0.63
LIG1-216ENST00000598938 MIB1Q86YT6 1006 aa18.98■□□□□ 0.63
LIG1-216ENST00000598938 MCOLN2Q8IZK6 566 aa18.98■□□□□ 0.63
LIG1-216ENST00000598938 VCPIP1Q96JH7 1222 aa18.98■□□□□ 0.63
LIG1-216ENST00000598938 ISCUQ9H1K1 167 aa18.98■□□□□ 0.63
LIG1-216ENST00000598938 SLC2A4RGQ9NR83 387 aa18.98■□□□□ 0.63
LIG1-216ENST00000598938 DLGAP2Q9P1A6 1054 aa18.98■□□□□ 0.63
LIG1-216ENST00000598938 CFAP97Q9P2B7 532 aa18.98■□□□□ 0.63
LIG1-216ENST00000598938 DNAH14Q0VDD8 3507 aa18.97■□□□□ 0.63
LIG1-216ENST00000598938 A0A087X0T9 212 aa18.97■□□□□ 0.63
LIG1-216ENST00000598938 TMCO5BA8MYB1 307 aa18.97■□□□□ 0.63
LIG1-216ENST00000598938 GOLGA8SH3BPF8 625 aa18.97■□□□□ 0.63
LIG1-216ENST00000598938 CAPN9O14815 690 aa18.97■□□□□ 0.63
LIG1-216ENST00000598938 CHADO15335 359 aa18.97■□□□□ 0.63
LIG1-216ENST00000598938 GRAP2O75791 330 aa18.97■□□□□ 0.63
LIG1-216ENST00000598938 FAM228BP0C875 321 aa18.97■□□□□ 0.63
LIG1-216ENST00000598938 GDI1P31150 447 aa18.97■□□□□ 0.63
LIG1-216ENST00000598938 COG7P83436 770 aa18.97■□□□□ 0.63
LIG1-216ENST00000598938 ARHGAP29Q52LW3 1261 aa18.97■□□□□ 0.63
LIG1-216ENST00000598938 ARCQ7LC44 396 aa18.97■□□□□ 0.63
LIG1-216ENST00000598938 YAF2Q8IY57 180 aa18.97■□□□□ 0.63
LIG1-216ENST00000598938 DEFB106AQ8N104 65 aa18.97■□□□□ 0.63
LIG1-216ENST00000598938 DQX1Q8TE96 717 aaKnown RBP18.97■□□□□ 0.63
LIG1-216ENST00000598938 RUBCNQ92622 972 aa18.97■□□□□ 0.63
LIG1-216ENST00000598938 WBP2Q969T9 261 aa18.97■□□□□ 0.63
LIG1-216ENST00000598938 CHP1Q99653 195 aa18.97■□□□□ 0.63
LIG1-216ENST00000598938 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.97■□□□□ 0.63
LIG1-216ENST00000598938 ARHGEF3Q9NR81 526 aa18.97■□□□□ 0.63
LIG1-216ENST00000598938 THG1LQ9NWX6 298 aaKnown RBP18.97■□□□□ 0.63
LIG1-216ENST00000598938 IMPACTQ9P2X3 320 aa18.97■□□□□ 0.63
LIG1-216ENST00000598938 SFMBT1Q9UHJ3 866 aa18.97■□□□□ 0.63
LIG1-216ENST00000598938 TMEM59LQ9UK28 342 aa18.97■□□□□ 0.63
LIG1-216ENST00000598938 CA14Q9ULX7 337 aa18.97■□□□□ 0.63
LIG1-216ENST00000598938 NENFQ9UMX5 172 aa18.97■□□□□ 0.63
LIG1-216ENST00000598938 SIT1Q9Y3P8 196 aa18.97■□□□□ 0.63
LIG1-216ENST00000598938 TCRBV5S1A1TA0A578 114 aa18.96■□□□□ 0.63
LIG1-216ENST00000598938 SLC12A8A0AV02 714 aa18.96■□□□□ 0.63
LIG1-216ENST00000598938 E2F8A0AVK6 867 aa18.96■□□□□ 0.63
LIG1-216ENST00000598938 ARNTLO00327 626 aa18.96■□□□□ 0.63
LIG1-216ENST00000598938 ZNF263O14978 683 aa18.96■□□□□ 0.63
LIG1-216ENST00000598938 GREM1O60565 184 aa18.96■□□□□ 0.63
LIG1-216ENST00000598938 STC2O76061 302 aa18.96■□□□□ 0.63
LIG1-216ENST00000598938 FTLP02792 175 aaPredicted RBP18.96■□□□□ 0.63
LIG1-216ENST00000598938 IRF1P10914 325 aa18.96■□□□□ 0.63
LIG1-216ENST00000598938 GPC5P78333 572 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms