RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 AMACRQ9UHK6 382 aa24.28■■□□□ 1.48
SYMPK-212ENST00000598896 HIDE1A8MVS5 230 aa24.27■■□□□ 1.48
SYMPK-212ENST00000598896 PRRG1O14668 218 aa24.27■■□□□ 1.48
SYMPK-212ENST00000598896 TGM5O43548 720 aa24.27■■□□□ 1.48
SYMPK-212ENST00000598896 L1CAMP32004 1257 aa24.27■■□□□ 1.48
SYMPK-212ENST00000598896 SLC7A5Q01650 507 aa24.27■■□□□ 1.48
SYMPK-212ENST00000598896 KRT81Q14533 505 aa24.27■■□□□ 1.48
SYMPK-212ENST00000598896 TCEAL8Q8IYN2 117 aa24.27■■□□□ 1.48
SYMPK-212ENST00000598896 PYROXD2Q8N2H3 581 aa24.27■■□□□ 1.48
SYMPK-212ENST00000598896 FAM71BQ8TC56 605 aa24.27■■□□□ 1.48
SYMPK-212ENST00000598896 FAM118BQ9BPY3 351 aa24.27■■□□□ 1.48
SYMPK-212ENST00000598896 HINFPQ9BQA5 517 aa24.27■■□□□ 1.48
SYMPK-212ENST00000598896 ENTPD7Q9NQZ7 604 aa24.27■■□□□ 1.48
SYMPK-212ENST00000598896 DMGDHQ9UI17 866 aaKnown RBP24.27■■□□□ 1.48
SYMPK-212ENST00000598896 IRAK3Q9Y616 596 aa24.27■■□□□ 1.48
SYMPK-212ENST00000598896 DYNC1I1O14576 645 aa24.26■■□□□ 1.47
SYMPK-212ENST00000598896 TJP3O95049 919 aa24.26■■□□□ 1.47
SYMPK-212ENST00000598896 HMGA1P17096 107 aaKnown RBP24.26■■□□□ 1.47
SYMPK-212ENST00000598896 CAMK1Q14012 370 aa24.26■■□□□ 1.47
SYMPK-212ENST00000598896 PDK2Q15119 407 aa24.26■■□□□ 1.47
SYMPK-212ENST00000598896 PPP6R3Q5H9R7 873 aaPredicted RBP24.26■■□□□ 1.47
SYMPK-212ENST00000598896 PLPP4Q5VZY2 271 aa24.26■■□□□ 1.47
SYMPK-212ENST00000598896 ARHGAP18Q8N392 663 aa24.26■■□□□ 1.47
SYMPK-212ENST00000598896 C12orf50Q8NA57 414 aaPredicted RBP24.26■■□□□ 1.47
SYMPK-212ENST00000598896 MAGOHBQ96A72 148 aaKnown RBP24.26■■□□□ 1.47
SYMPK-212ENST00000598896 KLHL5Q96PQ7 755 aa24.26■■□□□ 1.47
SYMPK-212ENST00000598896 EFR3BQ9Y2G0 817 aa24.26■■□□□ 1.47
SYMPK-212ENST00000598896 YBX2Q9Y2T7 364 aaKnown RBP24.26■■□□□ 1.47
SYMPK-212ENST00000598896 INSL5Q9Y5Q6 135 aa24.26■■□□□ 1.47
SYMPK-212ENST00000598896 IRAK2O43187 625 aa24.26■■□□□ 1.47
SYMPK-212ENST00000598896 MSI1O43347 362 aaKnown RBP24.26■■□□□ 1.47
SYMPK-212ENST00000598896 F9P00740 461 aa24.26■■□□□ 1.47
SYMPK-212ENST00000598896 ZDHHC11BP0C7U3 371 aa24.26■■□□□ 1.47
SYMPK-212ENST00000598896 CXCR3P49682 368 aa24.26■■□□□ 1.47
SYMPK-212ENST00000598896 TWF1Q12792 350 aa24.26■■□□□ 1.47
SYMPK-212ENST00000598896 MAIP1Q8WWC4 291 aa24.26■■□□□ 1.47
SYMPK-212ENST00000598896 KCTD15Q96SI1 283 aaPredicted RBP24.26■■□□□ 1.47
SYMPK-212ENST00000598896 PARD6BQ9BYG5 372 aa24.26■■□□□ 1.47
SYMPK-212ENST00000598896 SLITRK6Q9H5Y7 841 aa24.26■■□□□ 1.47
SYMPK-212ENST00000598896 TLR9Q9NR96 1032 aa24.26■■□□□ 1.47
SYMPK-212ENST00000598896 TLR8Q9NR97 1041 aaKnown RBP24.26■■□□□ 1.47
SYMPK-212ENST00000598896 FBXW11Q9UKB1 542 aa24.26■■□□□ 1.47
SYMPK-212ENST00000598896 C2orf71A6NGG8 1288 aa24.25■■□□□ 1.47
SYMPK-212ENST00000598896 GRM6O15303 877 aa24.25■■□□□ 1.47
SYMPK-212ENST00000598896 CST8O60676 142 aa24.25■■□□□ 1.47
SYMPK-212ENST00000598896 ELF1P32519 619 aa24.25■■□□□ 1.47
SYMPK-212ENST00000598896 ADRA1BP35368 520 aa24.25■■□□□ 1.47
SYMPK-212ENST00000598896 PBX2P40425 430 aa24.25■■□□□ 1.47
SYMPK-212ENST00000598896 ALDH1A3P47895 512 aa24.25■■□□□ 1.47
SYMPK-212ENST00000598896 DYNLT1P63172 113 aa24.25■■□□□ 1.47
SYMPK-212ENST00000598896 MRPL43Q8N983 215 aaKnown RBP24.25■■□□□ 1.47
SYMPK-212ENST00000598896 RNF139Q8WU17 664 aa24.25■■□□□ 1.47
SYMPK-212ENST00000598896 NTAN1Q96AB6 310 aa24.25■■□□□ 1.47
SYMPK-212ENST00000598896 LRRC19Q9H756 370 aa24.25■■□□□ 1.47
SYMPK-212ENST00000598896 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.25■■□□□ 1.47
SYMPK-212ENST00000598896 CLIC5Q9NZA1 410 aa24.25■■□□□ 1.47
SYMPK-212ENST00000598896 ZMYND10O75800 440 aa24.24■■□□□ 1.47
SYMPK-212ENST00000598896 CHRNA3P32297 505 aa24.24■■□□□ 1.47
SYMPK-212ENST00000598896 MSANTD2Q6P1R3 559 aa24.24■■□□□ 1.47
SYMPK-212ENST00000598896 LILRA6Q6PI73 481 aa24.24■■□□□ 1.47
SYMPK-212ENST00000598896 MAP7D3Q8IWC1 876 aa24.24■■□□□ 1.47
SYMPK-212ENST00000598896 DCLK3Q9C098 648 aa24.24■■□□□ 1.47
SYMPK-212ENST00000598896 ZSCAN5CA6NGD5 496 aaPredicted RBP24.24■■□□□ 1.47
SYMPK-212ENST00000598896 TBX18O95935 607 aa24.24■■□□□ 1.47
SYMPK-212ENST00000598896 ADH1AP07327 375 aa24.24■■□□□ 1.47
SYMPK-212ENST00000598896 CSH1P0DML2 217 aa24.24■■□□□ 1.47
SYMPK-212ENST00000598896 CSH2P0DML3 217 aa24.24■■□□□ 1.47
SYMPK-212ENST00000598896 RARGP13631 454 aa24.24■■□□□ 1.47
SYMPK-212ENST00000598896 IRS1P35568 1242 aa24.24■■□□□ 1.47
SYMPK-212ENST00000598896 KCNJ1P48048 391 aa24.24■■□□□ 1.47
SYMPK-212ENST00000598896 PSEN1P49768 467 aa24.24■■□□□ 1.47
SYMPK-212ENST00000598896 UBE3AQ05086 875 aa24.24■■□□□ 1.47
SYMPK-212ENST00000598896 SCAPQ12770 1279 aa24.24■■□□□ 1.47
SYMPK-212ENST00000598896 SNX1Q13596 522 aa24.24■■□□□ 1.47
SYMPK-212ENST00000598896 GLE1Q53GS7 698 aaKnown RBP24.24■■□□□ 1.47
SYMPK-212ENST00000598896 CCDC137Q6PK04 289 aaKnown RBP24.24■■□□□ 1.47
SYMPK-212ENST00000598896 BBS12Q6ZW61 710 aa24.24■■□□□ 1.47
SYMPK-212ENST00000598896 RFX6Q8HWS3 928 aa24.24■■□□□ 1.47
SYMPK-212ENST00000598896 PSTKQ8IV42 348 aaKnown RBP24.24■■□□□ 1.47
SYMPK-212ENST00000598896 HAUS1Q96CS2 278 aa24.24■■□□□ 1.47
SYMPK-212ENST00000598896 RNF157Q96PX1 679 aa24.24■■□□□ 1.47
SYMPK-212ENST00000598896 ZNF670Q9BS34 389 aa24.24■■□□□ 1.47
SYMPK-212ENST00000598896 WDCPQ9H6R7 721 aa24.24■■□□□ 1.47
SYMPK-212ENST00000598896 SAE1Q9UBE0 346 aaPredicted RBP24.24■■□□□ 1.47
SYMPK-212ENST00000598896 MAFFQ9ULX9 164 aa24.24■■□□□ 1.47
SYMPK-212ENST00000598896 PCDHA11Q9Y5I1 949 aa24.24■■□□□ 1.47
SYMPK-212ENST00000598896 TARSL2A2RTX5 802 aaKnown RBP24.23■■□□□ 1.47
SYMPK-212ENST00000598896 TTI1O43156 1089 aa24.23■■□□□ 1.47
SYMPK-212ENST00000598896 COILP38432 576 aaPredicted RBP24.23■■□□□ 1.47
SYMPK-212ENST00000598896 ANKRD20A8PQ5CZ79 823 aa24.23■■□□□ 1.47
SYMPK-212ENST00000598896 VSIG1Q86XK7 387 aa24.23■■□□□ 1.47
SYMPK-212ENST00000598896 PCDH19Q8TAB3 1148 aa24.23■■□□□ 1.47
SYMPK-212ENST00000598896 FAF2Q96CS3 445 aa24.23■■□□□ 1.47
SYMPK-212ENST00000598896 MYRFLQ96LU7 910 aa24.23■■□□□ 1.47
SYMPK-212ENST00000598896 GDF15Q99988 308 aa24.23■■□□□ 1.47
SYMPK-212ENST00000598896 UBE2OQ9C0C9 1292 aaKnown RBP24.23■■□□□ 1.47
SYMPK-212ENST00000598896 TKTL2Q9H0I9 626 aa24.23■■□□□ 1.47
SYMPK-212ENST00000598896 RB1P06400 928 aa24.22■■□□□ 1.47
SYMPK-212ENST00000598896 AIF1P55008 147 aa24.22■■□□□ 1.47
SYMPK-212ENST00000598896 VSNL1P62760 191 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms