RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.43□□□□□ -0.1
SCAF1-203ENST00000598359 A0A0A0MRY4 1105 aa14.42□□□□□ -0.1
SCAF1-203ENST00000598359 SLC12A8A0AV02 714 aa14.42□□□□□ -0.1
SCAF1-203ENST00000598359 YJEFN3A6XGL0 299 aa14.42□□□□□ -0.1
SCAF1-203ENST00000598359 E7ENQ6 273 aa14.42□□□□□ -0.1
SCAF1-203ENST00000598359 PMM2O15305 246 aa14.42□□□□□ -0.1
SCAF1-203ENST00000598359 GDF9O60383 454 aa14.42□□□□□ -0.1
SCAF1-203ENST00000598359 LETM1O95202 739 aaPredicted RBP14.42□□□□□ -0.1
SCAF1-203ENST00000598359 AFPP02771 609 aaKnown RBP14.42□□□□□ -0.1
SCAF1-203ENST00000598359 CORO1AP31146 461 aaKnown RBP14.42□□□□□ -0.1
SCAF1-203ENST00000598359 TNFRSF4P43489 277 aa14.42□□□□□ -0.1
SCAF1-203ENST00000598359 APBA1Q02410 837 aa14.42□□□□□ -0.1
SCAF1-203ENST00000598359 SF3A2Q15428 464 aaKnown RBP14.42□□□□□ -0.1
SCAF1-203ENST00000598359 PM20D1Q6GTS8 502 aa14.42□□□□□ -0.1
SCAF1-203ENST00000598359 GRAMD4Q6IC98 578 aa14.42□□□□□ -0.1
SCAF1-203ENST00000598359 FOXR2Q6PJQ5 311 aa14.42□□□□□ -0.1
SCAF1-203ENST00000598359 LCLAT1Q6UWP7 414 aa14.42□□□□□ -0.1
SCAF1-203ENST00000598359 TADA2BQ86TJ2 420 aa14.42□□□□□ -0.1
SCAF1-203ENST00000598359 GPR161Q8N6U8 529 aaKnown RBP14.42□□□□□ -0.1
SCAF1-203ENST00000598359 TERB1Q8NA31 727 aa14.42□□□□□ -0.1
SCAF1-203ENST00000598359 CCDC26Q8TAB7 109 aa14.42□□□□□ -0.1
SCAF1-203ENST00000598359 DUSP15Q9H1R2 295 aaPredicted RBP14.42□□□□□ -0.1
SCAF1-203ENST00000598359 LRRC4Q9HBW1 653 aa14.42□□□□□ -0.1
SCAF1-203ENST00000598359 MARCH2Q9P0N8 246 aa14.42□□□□□ -0.1
SCAF1-203ENST00000598359 EBF1Q9UH73 591 aa14.42□□□□□ -0.1
SCAF1-203ENST00000598359 SDK1Q7Z5N4 2213 aa14.41□□□□□ -0.1
SCAF1-203ENST00000598359 FAM208BQ5VWN6 2430 aa14.41□□□□□ -0.1
SCAF1-203ENST00000598359 M0QYV0 167 aa14.41□□□□□ -0.1
SCAF1-203ENST00000598359 P4HA2O15460 535 aa14.41□□□□□ -0.1
SCAF1-203ENST00000598359 CACNG3O60359 315 aa14.41□□□□□ -0.1
SCAF1-203ENST00000598359 GNA14O95837 355 aa14.41□□□□□ -0.1
SCAF1-203ENST00000598359 PAEPP09466 180 aa14.41□□□□□ -0.1
SCAF1-203ENST00000598359 BCKDHBP21953 392 aa14.41□□□□□ -0.1
SCAF1-203ENST00000598359 GBP1P32455 592 aa14.41□□□□□ -0.1
SCAF1-203ENST00000598359 MARSP56192 900 aaKnown RBP14.41□□□□□ -0.1
SCAF1-203ENST00000598359 LMNB2Q03252 620 aa14.41□□□□□ -0.1
SCAF1-203ENST00000598359 CETN1Q12798 172 aa14.41□□□□□ -0.1
SCAF1-203ENST00000598359 CSRP2Q16527 193 aa14.41□□□□□ -0.1
SCAF1-203ENST00000598359 PLK5Q496M5 336 aa14.41□□□□□ -0.1
SCAF1-203ENST00000598359 PKDCCQ504Y2 493 aa14.41□□□□□ -0.1
SCAF1-203ENST00000598359 EGFLAMQ63HQ2 1017 aa14.41□□□□□ -0.1
SCAF1-203ENST00000598359 PMF1Q6P1K2 205 aa14.41□□□□□ -0.1
SCAF1-203ENST00000598359 GJB7Q6PEY0 223 aa14.41□□□□□ -0.1
SCAF1-203ENST00000598359 PRR23CQ6ZRP0 262 aa14.41□□□□□ -0.1
SCAF1-203ENST00000598359 DENND1CQ8IV53 801 aa14.41□□□□□ -0.1
SCAF1-203ENST00000598359 SIX6OS1Q8N1H7 587 aa14.41□□□□□ -0.1
SCAF1-203ENST00000598359 ARHGAP18Q8N392 663 aa14.41□□□□□ -0.1
SCAF1-203ENST00000598359 ZNF276Q8N554 614 aa14.41□□□□□ -0.1
SCAF1-203ENST00000598359 FRMD1Q8N878 549 aa14.41□□□□□ -0.1
SCAF1-203ENST00000598359 ZNF513Q8N8E2 541 aaPredicted RBP14.41□□□□□ -0.1
SCAF1-203ENST00000598359 TRIML1Q8N9V2 468 aa14.41□□□□□ -0.1
SCAF1-203ENST00000598359 CLEC4CQ8WTT0 213 aa14.41□□□□□ -0.1
SCAF1-203ENST00000598359 HMGB4Q8WW32 186 aa14.41□□□□□ -0.1
SCAF1-203ENST00000598359 RLN3Q8WXF3 142 aa14.41□□□□□ -0.1
SCAF1-203ENST00000598359 CNOT6LQ96LI5 555 aaKnown RBP14.41□□□□□ -0.1
SCAF1-203ENST00000598359 CDK5RAP1Q96SZ6 601 aaKnown RBP14.41□□□□□ -0.1
SCAF1-203ENST00000598359 ACOX2Q99424 681 aa14.41□□□□□ -0.1
SCAF1-203ENST00000598359 CRACR2AQ9BSW2 395 aa14.41□□□□□ -0.1
SCAF1-203ENST00000598359 MARK1Q9P0L2 795 aa14.41□□□□□ -0.1
SCAF1-203ENST00000598359 WDR35Q9P2L0 1181 aa14.41□□□□□ -0.1
SCAF1-203ENST00000598359 SFMBT1Q9UHJ3 866 aa14.41□□□□□ -0.1
SCAF1-203ENST00000598359 RWDD2AQ9UIY3 292 aa14.41□□□□□ -0.1
SCAF1-203ENST00000598359 AGO1Q9UL18 857 aaKnown RBP14.41□□□□□ -0.1
SCAF1-203ENST00000598359 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.41□□□□□ -0.1
SCAF1-203ENST00000598359 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.4□□□□□ -0.1
SCAF1-203ENST00000598359 TCRBV21S2A2A0A5A6 115 aa14.4□□□□□ -0.1
SCAF1-203ENST00000598359 DCDC2BA2VCK2 349 aa14.4□□□□□ -0.1
SCAF1-203ENST00000598359 PRRT4C9JH25 899 aa14.4□□□□□ -0.1
SCAF1-203ENST00000598359 EPN2O95208 641 aa14.4□□□□□ -0.1
SCAF1-203ENST00000598359 SETSIPP0DME0 302 aa14.4□□□□□ -0.1
SCAF1-203ENST00000598359 ZNF132P52740 706 aa14.4□□□□□ -0.1
SCAF1-203ENST00000598359 COG7P83436 770 aa14.4□□□□□ -0.1
SCAF1-203ENST00000598359 CNGA2Q16280 664 aa14.4□□□□□ -0.1
SCAF1-203ENST00000598359 BSPRYQ5W0U4 402 aa14.4□□□□□ -0.1
SCAF1-203ENST00000598359 RASSF3Q86WH2 238 aa14.4□□□□□ -0.1
SCAF1-203ENST00000598359 FMNL3Q8IVF7 1028 aa14.4□□□□□ -0.1
SCAF1-203ENST00000598359 XPO6Q96QU8 1125 aaKnown RBP14.4□□□□□ -0.1
SCAF1-203ENST00000598359 UBE2TQ9NPD8 197 aaPredicted RBP14.4□□□□□ -0.1
SCAF1-203ENST00000598359 ACP6Q9NPH0 428 aa14.4□□□□□ -0.1
SCAF1-203ENST00000598359 RXFP3Q9NSD7 469 aa14.4□□□□□ -0.1
SCAF1-203ENST00000598359 CDV3Q9UKY7 258 aaKnown RBP14.4□□□□□ -0.1
SCAF1-203ENST00000598359 KIAA1257Q9ULG3 409 aa14.4□□□□□ -0.1
SCAF1-203ENST00000598359 STRIP2Q9ULQ0 834 aa14.4□□□□□ -0.1
SCAF1-203ENST00000598359 SYCE3A1L190 88 aa14.39□□□□□ -0.11
SCAF1-203ENST00000598359 MSI1O43347 362 aaKnown RBP14.39□□□□□ -0.11
SCAF1-203ENST00000598359 TSPAN3O60637 253 aa14.39□□□□□ -0.11
SCAF1-203ENST00000598359 LRP3O75074 770 aa14.39□□□□□ -0.11
SCAF1-203ENST00000598359 ADRB1P08588 477 aa14.39□□□□□ -0.11
SCAF1-203ENST00000598359 CISD3P0C7P0 127 aa14.39□□□□□ -0.11
SCAF1-203ENST00000598359 KRT5P13647 590 aa14.39□□□□□ -0.11
SCAF1-203ENST00000598359 DGKGP49619 791 aa14.39□□□□□ -0.11
SCAF1-203ENST00000598359 DAOAP59103 153 aa14.39□□□□□ -0.11
SCAF1-203ENST00000598359 GCNT1Q02742 428 aa14.39□□□□□ -0.11
SCAF1-203ENST00000598359 USP39Q53GS9 565 aaKnown RBP14.39□□□□□ -0.11
SCAF1-203ENST00000598359 EOGTQ5NDL2 527 aa14.39□□□□□ -0.11
SCAF1-203ENST00000598359 FYB2Q5VWT5 728 aa14.39□□□□□ -0.11
SCAF1-203ENST00000598359 TCEAL6Q6IPX3 200 aa14.39□□□□□ -0.11
SCAF1-203ENST00000598359 IRF2BP1Q8IU81 584 aa14.39□□□□□ -0.11
SCAF1-203ENST00000598359 PGBD3Q8N328 593 aa14.39□□□□□ -0.11
SCAF1-203ENST00000598359 SLC35F5Q8WV83 523 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms