RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 ERICH1Q86X53 443 aa16.37■□□□□ 0.21
LIG1-214ENST00000597146 NUP93Q8N1F7 819 aa16.37■□□□□ 0.21
LIG1-214ENST00000597146 PRCCQ92733 491 aaPredicted RBP16.37■□□□□ 0.21
LIG1-214ENST00000597146 FGF11Q92914 225 aa16.37■□□□□ 0.21
LIG1-214ENST00000597146 NUP58Q9BVL2 599 aa16.37■□□□□ 0.21
LIG1-214ENST00000597146 NACA2Q9H009 215 aa16.37■□□□□ 0.21
LIG1-214ENST00000597146 ST6GALNAC4Q9H4F1 302 aa16.37■□□□□ 0.21
LIG1-214ENST00000597146 MTMR6Q9Y217 621 aa16.37■□□□□ 0.21
LIG1-214ENST00000597146 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.36■□□□□ 0.21
LIG1-214ENST00000597146 ENC1O14682 589 aa16.36■□□□□ 0.21
LIG1-214ENST00000597146 PPP1R37O75864 691 aa16.36■□□□□ 0.21
LIG1-214ENST00000597146 KRT10P13645 584 aa16.36■□□□□ 0.21
LIG1-214ENST00000597146 ABCD1P33897 745 aa16.36■□□□□ 0.21
LIG1-214ENST00000597146 GRIA4P48058 902 aa16.36■□□□□ 0.21
LIG1-214ENST00000597146 POSTNQ15063 836 aa16.36■□□□□ 0.21
LIG1-214ENST00000597146 TEAD4Q15561 434 aa16.36■□□□□ 0.21
LIG1-214ENST00000597146 INAVAQ3KP66 663 aa16.36■□□□□ 0.21
LIG1-214ENST00000597146 RRAGBQ5VZM2 374 aa16.36■□□□□ 0.21
LIG1-214ENST00000597146 SFR1Q86XK3 245 aa16.36■□□□□ 0.21
LIG1-214ENST00000597146 OR5B17Q8NGF7 314 aa16.36■□□□□ 0.21
LIG1-214ENST00000597146 OVCA2Q8WZ82 227 aa16.36■□□□□ 0.21
LIG1-214ENST00000597146 TMEM176AQ96HP8 235 aa16.36■□□□□ 0.21
LIG1-214ENST00000597146 KCNK16Q96T55 309 aa16.36■□□□□ 0.21
LIG1-214ENST00000597146 MMS19Q96T76 1030 aa16.36■□□□□ 0.21
LIG1-214ENST00000597146 NRSN2Q9GZP1 204 aa16.36■□□□□ 0.21
LIG1-214ENST00000597146 ELOVL4Q9GZR5 314 aa16.36■□□□□ 0.21
LIG1-214ENST00000597146 WDR35Q9P2L0 1181 aa16.36■□□□□ 0.21
LIG1-214ENST00000597146 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.36■□□□□ 0.21
LIG1-214ENST00000597146 PCDHGA1Q9Y5H4 931 aa16.36■□□□□ 0.21
LIG1-214ENST00000597146 DOPEY2Q9Y3R5 2298 aa16.35■□□□□ 0.21
LIG1-214ENST00000597146 B8ZZF3 427 aa16.35■□□□□ 0.21
LIG1-214ENST00000597146 RTN3O95197 1032 aaPredicted RBP16.35■□□□□ 0.21
LIG1-214ENST00000597146 WISP1O95388 367 aa16.35■□□□□ 0.21
LIG1-214ENST00000597146 ACADMP11310 421 aa16.35■□□□□ 0.21
LIG1-214ENST00000597146 PRKCHP24723 683 aa16.35■□□□□ 0.21
LIG1-214ENST00000597146 ACSL1P33121 698 aa16.35■□□□□ 0.21
LIG1-214ENST00000597146 CTSKP43235 329 aa16.35■□□□□ 0.21
LIG1-214ENST00000597146 ACADVLP49748 655 aa16.35■□□□□ 0.21
LIG1-214ENST00000597146 TUBP50607 506 aa16.35■□□□□ 0.21
LIG1-214ENST00000597146 SLC5A3P53794 718 aa16.35■□□□□ 0.21
LIG1-214ENST00000597146 SRSF1Q07955 248 aaKnown RBP eCLIP16.35■□□□□ 0.21
LIG1-214ENST00000597146 KCNH2Q12809 1159 aa16.35■□□□□ 0.21
LIG1-214ENST00000597146 GEN1Q17RS7 908 aa16.35■□□□□ 0.21
LIG1-214ENST00000597146 SNX30Q5VWJ9 437 aa16.35■□□□□ 0.21
LIG1-214ENST00000597146 HTR3DQ70Z44 454 aa16.35■□□□□ 0.21
LIG1-214ENST00000597146 KRI1Q8N9T8 703 aaKnown RBP16.35■□□□□ 0.21
LIG1-214ENST00000597146 NAF1Q96HR8 494 aaKnown RBP16.35■□□□□ 0.21
LIG1-214ENST00000597146 CNDP2Q96KP4 475 aaKnown RBP16.35■□□□□ 0.21
LIG1-214ENST00000597146 B3GNT5Q9BYG0 378 aa16.35■□□□□ 0.21
LIG1-214ENST00000597146 PANK2Q9BZ23 570 aa16.35■□□□□ 0.21
LIG1-214ENST00000597146 CPNE5Q9HCH3 593 aa16.35■□□□□ 0.21
LIG1-214ENST00000597146 THAP10Q9P2Z0 257 aaPredicted RBP16.35■□□□□ 0.21
LIG1-214ENST00000597146 TFIP11Q9UBB9 837 aaKnown RBP16.35■□□□□ 0.21
LIG1-214ENST00000597146 SRPRBQ9Y5M8 271 aaKnown RBP16.35■□□□□ 0.21
LIG1-214ENST00000597146 SYNCRIPO60506 623 aaKnown RBP16.34■□□□□ 0.21
LIG1-214ENST00000597146 TBX18O95935 607 aa16.34■□□□□ 0.21
LIG1-214ENST00000597146 PTPN1P18031 435 aaKnown RBP16.34■□□□□ 0.21
LIG1-214ENST00000597146 GRIN1Q05586 938 aa16.34■□□□□ 0.21
LIG1-214ENST00000597146 ENPP2Q13822 863 aa16.34■□□□□ 0.21
LIG1-214ENST00000597146 FOXD4L6Q3SYB3 417 aaPredicted RBP16.34■□□□□ 0.21
LIG1-214ENST00000597146 PRAMEF14Q5SWL7 426 aa16.34■□□□□ 0.21
LIG1-214ENST00000597146 FBXL19Q6PCT2 694 aa16.34■□□□□ 0.21
LIG1-214ENST00000597146 FOXD4L3Q6VB84 417 aaPredicted RBP16.34■□□□□ 0.21
LIG1-214ENST00000597146 ZNF720Q7Z2F6 126 aa16.34■□□□□ 0.21
LIG1-214ENST00000597146 OR6B3Q8NGW1 331 aa16.34■□□□□ 0.21
LIG1-214ENST00000597146 RAD54LQ92698 747 aa16.34■□□□□ 0.21
LIG1-214ENST00000597146 EPSTI1Q96J88 318 aa16.34■□□□□ 0.21
LIG1-214ENST00000597146 LGMNQ99538 433 aa16.34■□□□□ 0.21
LIG1-214ENST00000597146 KLF16Q9BXK1 252 aaPredicted RBP16.34■□□□□ 0.21
LIG1-214ENST00000597146 SNX25Q9H3E2 840 aa16.34■□□□□ 0.21
LIG1-214ENST00000597146 R3HCC1Q9Y3T6 440 aaKnown RBP16.34■□□□□ 0.21
LIG1-214ENST00000597146 ARID1BQ8NFD5 2236 aaPredicted RBP16.34■□□□□ 0.21
LIG1-214ENST00000597146 BOD1L1Q8NFC6 3051 aa16.33■□□□□ 0.21
LIG1-214ENST00000597146 PAPSS1O43252 624 aaPredicted RBP16.33■□□□□ 0.2
LIG1-214ENST00000597146 SLC28A2O43868 658 aa16.33■□□□□ 0.2
LIG1-214ENST00000597146 TLR5O60602 858 aa16.33■□□□□ 0.2
LIG1-214ENST00000597146 ZDHHC11BP0C7U3 371 aa16.33■□□□□ 0.2
LIG1-214ENST00000597146 C6P13671 934 aa16.33■□□□□ 0.2
LIG1-214ENST00000597146 GNL1P36915 607 aaPredicted RBP16.33■□□□□ 0.2
LIG1-214ENST00000597146 MFAP3P55082 362 aa16.33■□□□□ 0.2
LIG1-214ENST00000597146 CDH8P55286 799 aa16.33■□□□□ 0.2
LIG1-214ENST00000597146 RHDQ02161 417 aa16.33■□□□□ 0.2
LIG1-214ENST00000597146 ORC1Q13415 861 aa16.33■□□□□ 0.2
LIG1-214ENST00000597146 ZNF234Q14588 700 aa16.33■□□□□ 0.2
LIG1-214ENST00000597146 SLC39A14Q15043 492 aa16.33■□□□□ 0.2
LIG1-214ENST00000597146 TBC1D25Q3MII6 688 aa16.33■□□□□ 0.2
LIG1-214ENST00000597146 ARHGAP40Q5TG30 622 aa16.33■□□□□ 0.2
LIG1-214ENST00000597146 SV2BQ7L1I2 683 aa16.33■□□□□ 0.2
LIG1-214ENST00000597146 ADAT2Q7Z6V5 191 aaKnown RBP16.33■□□□□ 0.2
LIG1-214ENST00000597146 LARP4BQ92615 738 aaKnown RBP16.33■□□□□ 0.2
LIG1-214ENST00000597146 BIRC7Q96CA5 298 aa16.33■□□□□ 0.2
LIG1-214ENST00000597146 HVCN1Q96D96 273 aa16.33■□□□□ 0.2
LIG1-214ENST00000597146 ANKRD36BP1Q96IX9 119 aa16.33■□□□□ 0.2
LIG1-214ENST00000597146 CLIC6Q96NY7 704 aa16.33■□□□□ 0.2
LIG1-214ENST00000597146 USP28Q96RU2 1077 aa16.33■□□□□ 0.2
LIG1-214ENST00000597146 CBWD1Q9BRT8 395 aa16.33■□□□□ 0.2
LIG1-214ENST00000597146 PCED1AQ9H1Q7 454 aa16.33■□□□□ 0.2
LIG1-214ENST00000597146 PCIF1Q9H4Z3 704 aa16.33■□□□□ 0.2
LIG1-214ENST00000597146 OSGEPQ9NPF4 335 aa16.33■□□□□ 0.2
LIG1-214ENST00000597146 INTS13Q9NVM9 706 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms