RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 AMPD2Q01433 879 aa11.58□□□□□ -0.56
LIG1-211ENST00000596457 FMO1Q01740 532 aa11.58□□□□□ -0.56
LIG1-211ENST00000596457 DHCR24Q15392 516 aa11.58□□□□□ -0.56
LIG1-211ENST00000596457 ASIC2Q16515 512 aa11.58□□□□□ -0.56
LIG1-211ENST00000596457 SFMBT2Q5VUG0 894 aa11.58□□□□□ -0.56
LIG1-211ENST00000596457 SMYD5Q6GMV2 418 aa11.58□□□□□ -0.56
LIG1-211ENST00000596457 KLHDC10Q6PID8 442 aa11.58□□□□□ -0.56
LIG1-211ENST00000596457 TXNDC11Q6PKC3 985 aa11.58□□□□□ -0.56
LIG1-211ENST00000596457 HTR3DQ70Z44 454 aa11.58□□□□□ -0.56
LIG1-211ENST00000596457 RALGPS2Q86X27 583 aaPredicted RBP11.58□□□□□ -0.56
LIG1-211ENST00000596457 ZNF677Q86XU0 584 aa11.58□□□□□ -0.56
LIG1-211ENST00000596457 DENND1CQ8IV53 801 aa11.58□□□□□ -0.56
LIG1-211ENST00000596457 ZNF276Q8N554 614 aa11.58□□□□□ -0.56
LIG1-211ENST00000596457 NAT16Q8N8M0 369 aa11.58□□□□□ -0.56
LIG1-211ENST00000596457 PJA1Q8NG27 643 aa11.58□□□□□ -0.56
LIG1-211ENST00000596457 SLC30A5Q8TAD4 765 aa11.58□□□□□ -0.56
LIG1-211ENST00000596457 ADAM32Q8TC27 787 aa11.58□□□□□ -0.56
LIG1-211ENST00000596457 ATOH1Q92858 354 aaPredicted RBP11.58□□□□□ -0.56
LIG1-211ENST00000596457 CHFRQ96EP1 664 aa11.58□□□□□ -0.56
LIG1-211ENST00000596457 PIWIL1Q96J94 861 aaKnown RBP11.58□□□□□ -0.56
LIG1-211ENST00000596457 AGPAT1Q99943 283 aa11.58□□□□□ -0.56
LIG1-211ENST00000596457 LMAN1LQ9HAT1 526 aa11.58□□□□□ -0.56
LIG1-211ENST00000596457 NOCTQ9UK39 431 aaKnown RBP11.58□□□□□ -0.56
LIG1-211ENST00000596457 CHD8Q9HCK8 2581 aa11.58□□□□□ -0.56
LIG1-211ENST00000596457 SHISA7A6NL88 538 aa11.57□□□□□ -0.56
LIG1-211ENST00000596457 CBFA2T2O43439 604 aa11.57□□□□□ -0.56
LIG1-211ENST00000596457 FYNP06241 537 aa11.57□□□□□ -0.56
LIG1-211ENST00000596457 TPM3P06753 285 aa11.57□□□□□ -0.56
LIG1-211ENST00000596457 SKILP12757 684 aa11.57□□□□□ -0.56
LIG1-211ENST00000596457 SLC6A11P48066 632 aa11.57□□□□□ -0.56
LIG1-211ENST00000596457 GALK1P51570 392 aa11.57□□□□□ -0.56
LIG1-211ENST00000596457 TBX4P57082 545 aa11.57□□□□□ -0.56
LIG1-211ENST00000596457 YWHAZP63104 245 aaKnown RBP11.57□□□□□ -0.56
LIG1-211ENST00000596457 NOMO3P69849 1222 aa11.57□□□□□ -0.56
LIG1-211ENST00000596457 SLC6A3Q01959 620 aa11.57□□□□□ -0.56
LIG1-211ENST00000596457 DCAF6Q58WW2 860 aa11.57□□□□□ -0.56
LIG1-211ENST00000596457 EFHC1Q5JVL4 640 aa11.57□□□□□ -0.56
LIG1-211ENST00000596457 LY6G5CQ5SRR4 150 aa11.57□□□□□ -0.56
LIG1-211ENST00000596457 SYPL2Q5VXT5 272 aa11.57□□□□□ -0.56
LIG1-211ENST00000596457 NAIF1Q69YI7 327 aaPredicted RBP11.57□□□□□ -0.56
LIG1-211ENST00000596457 RHBDF2Q6PJF5 856 aa11.57□□□□□ -0.56
LIG1-211ENST00000596457 CCDC105Q8IYK2 499 aa11.57□□□□□ -0.56
LIG1-211ENST00000596457 DEFB106AQ8N104 65 aa11.57□□□□□ -0.56
LIG1-211ENST00000596457 MSANTD4Q8NCY6 345 aa11.57□□□□□ -0.56
LIG1-211ENST00000596457 BAP1Q92560 729 aa11.57□□□□□ -0.56
LIG1-211ENST00000596457 BHMTQ93088 406 aa11.57□□□□□ -0.56
LIG1-211ENST00000596457 PLD4Q96BZ4 506 aa11.57□□□□□ -0.56
LIG1-211ENST00000596457 OTUB2Q96DC9 234 aa11.57□□□□□ -0.56
LIG1-211ENST00000596457 C18orf8Q96DM3 657 aa11.57□□□□□ -0.56
LIG1-211ENST00000596457 PCDHB18PQ96TA0 734 aa11.57□□□□□ -0.56
LIG1-211ENST00000596457 NELL2Q99435 816 aa11.57□□□□□ -0.56
LIG1-211ENST00000596457 DDX23Q9BUQ8 820 aaKnown RBP11.57□□□□□ -0.56
LIG1-211ENST00000596457 NUP58Q9BVL2 599 aa11.57□□□□□ -0.56
LIG1-211ENST00000596457 OSBPL6Q9BZF3 934 aa11.57□□□□□ -0.56
LIG1-211ENST00000596457 DCLK3Q9C098 648 aa11.57□□□□□ -0.56
LIG1-211ENST00000596457 POPDC2Q9HBU9 364 aa11.57□□□□□ -0.56
LIG1-211ENST00000596457 RBM12Q9NTZ6 932 aaKnown RBP11.57□□□□□ -0.56
LIG1-211ENST00000596457 TMCO5BA8MYB1 307 aa11.56□□□□□ -0.56
LIG1-211ENST00000596457 PROB1E7EW31 1015 aa11.56□□□□□ -0.56
LIG1-211ENST00000596457 TRDMT1O14717 391 aaKnown RBP11.56□□□□□ -0.56
LIG1-211ENST00000596457 GREM1O60565 184 aa11.56□□□□□ -0.56
LIG1-211ENST00000596457 TSPAN3O60637 253 aa11.56□□□□□ -0.56
LIG1-211ENST00000596457 LSM8O95777 96 aaKnown RBP11.56□□□□□ -0.56
LIG1-211ENST00000596457 ADH1CP00326 375 aa11.56□□□□□ -0.56
LIG1-211ENST00000596457 KLKB1P03952 638 aa11.56□□□□□ -0.56
LIG1-211ENST00000596457 ADH5P11766 374 aa11.56□□□□□ -0.56
LIG1-211ENST00000596457 CDH5P33151 784 aaPredicted RBP11.56□□□□□ -0.56
LIG1-211ENST00000596457 MAGEA9P43362 315 aa11.56□□□□□ -0.56
LIG1-211ENST00000596457 ID4P47928 161 aa11.56□□□□□ -0.56
LIG1-211ENST00000596457 HARS2P49590 506 aaKnown RBP11.56□□□□□ -0.56
LIG1-211ENST00000596457 GAD2Q05329 585 aa11.56□□□□□ -0.56
LIG1-211ENST00000596457 KDSRQ06136 332 aa11.56□□□□□ -0.56
LIG1-211ENST00000596457 FAM102AQ5T9C2 384 aaPredicted RBP11.56□□□□□ -0.56
LIG1-211ENST00000596457 MMS22LQ6ZRQ5 1243 aa11.56□□□□□ -0.56
LIG1-211ENST00000596457 TOGARAM2Q6ZUX3 1019 aa11.56□□□□□ -0.56
LIG1-211ENST00000596457 IRF2BP2Q7Z5L9 587 aa11.56□□□□□ -0.56
LIG1-211ENST00000596457 TMEM25Q86YD3 366 aa11.56□□□□□ -0.56
LIG1-211ENST00000596457 DTWD2Q8NBA8 298 aa11.56□□□□□ -0.56
LIG1-211ENST00000596457 ZNF397Q8NF99 534 aaPredicted RBP11.56□□□□□ -0.56
LIG1-211ENST00000596457 DQX1Q8TE96 717 aaKnown RBP11.56□□□□□ -0.56
LIG1-211ENST00000596457 CD101Q93033 1021 aa11.56□□□□□ -0.56
LIG1-211ENST00000596457 RNF34Q969K3 372 aa11.56□□□□□ -0.56
LIG1-211ENST00000596457 MSANTD3Q96H12 275 aa11.56□□□□□ -0.56
LIG1-211ENST00000596457 P2RY13Q9BPV8 354 aa11.56□□□□□ -0.56
LIG1-211ENST00000596457 C11orf70Q9BRQ4 267 aa11.56□□□□□ -0.56
LIG1-211ENST00000596457 TRIM62Q9BVG3 475 aa11.56□□□□□ -0.56
LIG1-211ENST00000596457 BBS2Q9BXC9 721 aa11.56□□□□□ -0.56
LIG1-211ENST00000596457 SPHK2Q9NRA0 654 aa11.56□□□□□ -0.56
LIG1-211ENST00000596457 PLK2Q9NYY3 685 aa11.56□□□□□ -0.56
LIG1-211ENST00000596457 AGO1Q9UL18 857 aaKnown RBP11.56□□□□□ -0.56
LIG1-211ENST00000596457 ZNF510Q9Y2H8 683 aa11.56□□□□□ -0.56
LIG1-211ENST00000596457 HBS1LQ9Y450 684 aaKnown RBP11.56□□□□□ -0.56
LIG1-211ENST00000596457 NEDD8-MDP1E9PL57 170 aa11.55□□□□□ -0.56
LIG1-211ENST00000596457 H0Y858 1186 aa11.55□□□□□ -0.56
LIG1-211ENST00000596457 HSF2BPO75031 334 aa11.55□□□□□ -0.56
LIG1-211ENST00000596457 MOCS2O96007 188 aaPredicted RBP11.55□□□□□ -0.56
LIG1-211ENST00000596457 EGFP01133 1207 aa11.55□□□□□ -0.56
LIG1-211ENST00000596457 CYP1A1P04798 512 aaPredicted RBP11.55□□□□□ -0.56
LIG1-211ENST00000596457 GBP1P32455 592 aa11.55□□□□□ -0.56
LIG1-211ENST00000596457 PBX1P40424 430 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms