RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 DENND1CQ8IV53 801 aa17.87■□□□□ 0.45
CCDC9-202ENST00000595659 SPATA20Q8TB22 786 aa17.87■□□□□ 0.45
CCDC9-202ENST00000595659 IPO4Q8TEX9 1081 aaKnown RBP17.87■□□□□ 0.45
CCDC9-202ENST00000595659 SLC35C1Q96A29 364 aa17.87■□□□□ 0.45
CCDC9-202ENST00000595659 FAXDC2Q96IV6 333 aa17.87■□□□□ 0.45
CCDC9-202ENST00000595659 LSM14BQ9BX40 385 aaKnown RBP17.87■□□□□ 0.45
CCDC9-202ENST00000595659 UBXN6Q9BZV1 441 aa17.87■□□□□ 0.45
CCDC9-202ENST00000595659 TMEM74BQ9NUR3 256 aa17.87■□□□□ 0.45
CCDC9-202ENST00000595659 MAN1B1Q9UKM7 699 aa17.87■□□□□ 0.45
CCDC9-202ENST00000595659 AGO1Q9UL18 857 aaKnown RBP17.87■□□□□ 0.45
CCDC9-202ENST00000595659 COQ4Q9Y3A0 265 aa17.87■□□□□ 0.45
CCDC9-202ENST00000595659 ATXN2Q99700 1313 aaKnown RBP17.87■□□□□ 0.45
CCDC9-202ENST00000595659 ZBED1O96006 694 aa17.86■□□□□ 0.45
CCDC9-202ENST00000595659 CALCAP01258 141 aa17.86■□□□□ 0.45
CCDC9-202ENST00000595659 SLC8A3P57103 927 aa17.86■□□□□ 0.45
CCDC9-202ENST00000595659 SGO2Q562F6 1265 aa17.86■□□□□ 0.45
CCDC9-202ENST00000595659 ARHGAP18Q8N392 663 aa17.86■□□□□ 0.45
CCDC9-202ENST00000595659 ZNF276Q8N554 614 aa17.86■□□□□ 0.45
CCDC9-202ENST00000595659 CDK5RAP1Q96SZ6 601 aaKnown RBP17.86■□□□□ 0.45
CCDC9-202ENST00000595659 LRRC4Q9HBW1 653 aa17.86■□□□□ 0.45
CCDC9-202ENST00000595659 PIK3R2O00459 728 aa17.85■□□□□ 0.45
CCDC9-202ENST00000595659 GIPC1O14908 333 aa17.85■□□□□ 0.45
CCDC9-202ENST00000595659 KCNK5O95279 499 aa17.85■□□□□ 0.45
CCDC9-202ENST00000595659 NDUFV2P19404 249 aa17.85■□□□□ 0.45
CCDC9-202ENST00000595659 ITPKAP23677 461 aa17.85■□□□□ 0.45
CCDC9-202ENST00000595659 RPL6Q02878 288 aaKnown RBP17.85■□□□□ 0.45
CCDC9-202ENST00000595659 EML5Q05BV3 1969 aa17.85■□□□□ 0.45
CCDC9-202ENST00000595659 LRRC63Q05C16 580 aa17.85■□□□□ 0.45
CCDC9-202ENST00000595659 ADIGQ0VDE8 80 aa17.85■□□□□ 0.45
CCDC9-202ENST00000595659 BYSLQ13895 437 aaKnown RBP17.85■□□□□ 0.45
CCDC9-202ENST00000595659 UAP1L1Q3KQV9 507 aa17.85■□□□□ 0.45
CCDC9-202ENST00000595659 TRIM61Q5EBN2 209 aa17.85■□□□□ 0.45
CCDC9-202ENST00000595659 FYB2Q5VWT5 728 aa17.85■□□□□ 0.45
CCDC9-202ENST00000595659 PSAPL1Q6NUJ1 521 aa17.85■□□□□ 0.45
CCDC9-202ENST00000595659 EDEM1Q92611 657 aa17.85■□□□□ 0.45
CCDC9-202ENST00000595659 TIGD1Q96MW7 591 aa17.85■□□□□ 0.45
CCDC9-202ENST00000595659 FSCN3Q9NQT6 498 aa17.85■□□□□ 0.45
CCDC9-202ENST00000595659 HESX1Q9UBX0 185 aa17.85■□□□□ 0.45
CCDC9-202ENST00000595659 HOOK1Q9UJC3 728 aaKnown RBP17.85■□□□□ 0.45
CCDC9-202ENST00000595659 STRIP2Q9ULQ0 834 aa17.85■□□□□ 0.45
CCDC9-202ENST00000595659 CLEC4EQ9ULY5 219 aa17.85■□□□□ 0.45
CCDC9-202ENST00000595659 MYO16Q9Y6X6 1858 aa17.85■□□□□ 0.45
CCDC9-202ENST00000595659 BIN1O00499 593 aa17.84■□□□□ 0.45
CCDC9-202ENST00000595659 CDX4O14627 284 aaPredicted RBP17.84■□□□□ 0.45
CCDC9-202ENST00000595659 PSMA7O14818 248 aa17.84■□□□□ 0.45
CCDC9-202ENST00000595659 XPO1O14980 1071 aaKnown RBP17.84■□□□□ 0.45
CCDC9-202ENST00000595659 ZBTB24O43167 697 aaPredicted RBP17.84■□□□□ 0.45
CCDC9-202ENST00000595659 VDRP11473 427 aa17.84■□□□□ 0.45
CCDC9-202ENST00000595659 LCP1P13796 627 aa17.84■□□□□ 0.45
CCDC9-202ENST00000595659 FMO5P49326 533 aa17.84■□□□□ 0.45
CCDC9-202ENST00000595659 BCAT1P54687 386 aa17.84■□□□□ 0.45
CCDC9-202ENST00000595659 STIM1Q13586 685 aa17.84■□□□□ 0.45
CCDC9-202ENST00000595659 GEN1Q17RS7 908 aa17.84■□□□□ 0.45
CCDC9-202ENST00000595659 CCDC40Q4G0X9 1142 aa17.84■□□□□ 0.45
CCDC9-202ENST00000595659 LYSMD4Q5XG99 296 aa17.84■□□□□ 0.45
CCDC9-202ENST00000595659 PM20D1Q6GTS8 502 aa17.84■□□□□ 0.45
CCDC9-202ENST00000595659 TMEM270Q6UE05 265 aa17.84■□□□□ 0.45
CCDC9-202ENST00000595659 BHLHA9Q7RTU4 235 aa17.84■□□□□ 0.45
CCDC9-202ENST00000595659 FMNL3Q8IVF7 1028 aa17.84■□□□□ 0.45
CCDC9-202ENST00000595659 TFAP2BQ92481 460 aa17.84■□□□□ 0.45
CCDC9-202ENST00000595659 KAT5Q92993 513 aa17.84■□□□□ 0.45
CCDC9-202ENST00000595659 DHTKD1Q96HY7 919 aaPredicted RBP17.84■□□□□ 0.45
CCDC9-202ENST00000595659 IPO9Q96P70 1041 aaKnown RBP17.84■□□□□ 0.45
CCDC9-202ENST00000595659 GABRG3Q99928 467 aa17.84■□□□□ 0.45
CCDC9-202ENST00000595659 DCLK3Q9C098 648 aa17.84■□□□□ 0.45
CCDC9-202ENST00000595659 CD248Q9HCU0 757 aa17.84■□□□□ 0.45
CCDC9-202ENST00000595659 CD93Q9NPY3 652 aa17.84■□□□□ 0.45
CCDC9-202ENST00000595659 SFMBT1Q9UHJ3 866 aa17.84■□□□□ 0.45
CCDC9-202ENST00000595659 FBXO10Q9UK96 956 aa17.84■□□□□ 0.45
CCDC9-202ENST00000595659 CYP8B1Q9UNU6 501 aa17.84■□□□□ 0.45
CCDC9-202ENST00000595659 ZNF510Q9Y2H8 683 aa17.84■□□□□ 0.45
CCDC9-202ENST00000595659 PCDHB4Q9Y5E5 795 aa17.84■□□□□ 0.45
CCDC9-202ENST00000595659 SPTBN2O15020 2390 aa17.84■□□□□ 0.45
CCDC9-202ENST00000595659 MYOFQ9NZM1 2061 aa17.84■□□□□ 0.45
CCDC9-202ENST00000595659 KIAA1549LQ6ZVL6 1849 aa17.84■□□□□ 0.45
CCDC9-202ENST00000595659 O00370 1275 aa17.83■□□□□ 0.44
CCDC9-202ENST00000595659 TSPAN3O60637 253 aa17.83■□□□□ 0.44
CCDC9-202ENST00000595659 GADD45BO75293 160 aaPredicted RBP17.83■□□□□ 0.44
CCDC9-202ENST00000595659 PENKP01210 267 aaPredicted RBP17.83■□□□□ 0.44
CCDC9-202ENST00000595659 BMP6P22004 513 aa17.83■□□□□ 0.44
CCDC9-202ENST00000595659 CHKAP35790 457 aa17.83■□□□□ 0.44
CCDC9-202ENST00000595659 MAPK8P45983 427 aa17.83■□□□□ 0.44
CCDC9-202ENST00000595659 RGS7P49802 495 aa17.83■□□□□ 0.44
CCDC9-202ENST00000595659 MFAP3P55082 362 aa17.83■□□□□ 0.44
CCDC9-202ENST00000595659 YWHAEP62258 255 aaKnown RBP17.83■□□□□ 0.44
CCDC9-202ENST00000595659 BST2Q10589 180 aaKnown RBP17.83■□□□□ 0.44
CCDC9-202ENST00000595659 DAB2IPQ5VWQ8 1189 aa17.83■□□□□ 0.44
CCDC9-202ENST00000595659 KIAA1324Q6UXG2 1013 aaKnown RBP17.83■□□□□ 0.44
CCDC9-202ENST00000595659 SYT12Q8IV01 421 aa17.83■□□□□ 0.44
CCDC9-202ENST00000595659 UBR7Q8N806 425 aa17.83■□□□□ 0.44
CCDC9-202ENST00000595659 DDI1Q8WTU0 396 aa17.83■□□□□ 0.44
CCDC9-202ENST00000595659 METTL14Q9HCE5 456 aaKnown RBP17.83■□□□□ 0.44
CCDC9-202ENST00000595659 TMEM9BQ9NQ34 198 aa17.83■□□□□ 0.44
CCDC9-202ENST00000595659 STON1Q9Y6Q2 735 aa17.83■□□□□ 0.44
CCDC9-202ENST00000595659 IGHV1OR15-9A0A0B4J2B8 117 aa17.82■□□□□ 0.44
CCDC9-202ENST00000595659 YJEFN3A6XGL0 299 aa17.82■□□□□ 0.44
CCDC9-202ENST00000595659 PPP1R3GB7ZBB8 358 aa17.82■□□□□ 0.44
CCDC9-202ENST00000595659 E7ENQ6 273 aa17.82■□□□□ 0.44
CCDC9-202ENST00000595659 RNF225M0QZC1 329 aaPredicted RBP17.82■□□□□ 0.44
CCDC9-202ENST00000595659 CFIP05156 583 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms