RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 MGARPQ8TDB4 240 aa17.72■□□□□ 0.43
SHKBP1-205ENST00000594973 CLEC4CQ8WTT0 213 aa17.72■□□□□ 0.43
SHKBP1-205ENST00000594973 SLC4A5Q9BY07 1137 aa17.72■□□□□ 0.43
SHKBP1-205ENST00000594973 UBE2OQ9C0C9 1292 aaKnown RBP17.72■□□□□ 0.43
SHKBP1-205ENST00000594973 TLE6Q9H808 572 aa17.72■□□□□ 0.43
SHKBP1-205ENST00000594973 TMCO1Q9UM00 188 aa17.72■□□□□ 0.43
SHKBP1-205ENST00000594973 RALGAPA2Q2PPJ7 1873 aa17.72■□□□□ 0.43
SHKBP1-205ENST00000594973 PRPSAP2O60256 369 aa17.71■□□□□ 0.43
SHKBP1-205ENST00000594973 CYBAP13498 195 aa17.71■□□□□ 0.43
SHKBP1-205ENST00000594973 IGFBP6P24592 240 aaPredicted RBP17.71■□□□□ 0.43
SHKBP1-205ENST00000594973 CDH6P55285 790 aa17.71■□□□□ 0.43
SHKBP1-205ENST00000594973 SLC6A3Q01959 620 aa17.71■□□□□ 0.43
SHKBP1-205ENST00000594973 XKR4Q5GH76 650 aa17.71■□□□□ 0.43
SHKBP1-205ENST00000594973 MFSD14CQ5VZR4 134 aa17.71■□□□□ 0.43
SHKBP1-205ENST00000594973 TMEM110Q86TL2 294 aa17.71■□□□□ 0.43
SHKBP1-205ENST00000594973 TAB3Q8N5C8 712 aaPredicted RBP17.71■□□□□ 0.43
SHKBP1-205ENST00000594973 SLC2A14Q8TDB8 520 aa17.71■□□□□ 0.43
SHKBP1-205ENST00000594973 LRRC8CQ8TDW0 803 aa17.71■□□□□ 0.43
SHKBP1-205ENST00000594973 NKD2Q969F2 451 aaPredicted RBP17.71■□□□□ 0.43
SHKBP1-205ENST00000594973 TBC1D10AQ9BXI6 508 aa17.71■□□□□ 0.43
SHKBP1-205ENST00000594973 ZCWPW1Q9H0M4 648 aa17.71■□□□□ 0.43
SHKBP1-205ENST00000594973 GTF2IRD1Q9UHL9 959 aa17.71■□□□□ 0.43
SHKBP1-205ENST00000594973 ST3GAL5Q9UNP4 418 aa17.71■□□□□ 0.43
SHKBP1-205ENST00000594973 DRG1Q9Y295 367 aaKnown RBP17.71■□□□□ 0.43
SHKBP1-205ENST00000594973 PTGESO14684 152 aa17.71■□□□□ 0.43
SHKBP1-205ENST00000594973 HNRNPCL1O60812 293 aaKnown RBP17.71■□□□□ 0.43
SHKBP1-205ENST00000594973 HUS1O60921 280 aa17.71■□□□□ 0.43
SHKBP1-205ENST00000594973 TTC4O95801 387 aa17.71■□□□□ 0.43
SHKBP1-205ENST00000594973 ITGAVP06756 1048 aa17.71■□□□□ 0.43
SHKBP1-205ENST00000594973 RARBP10826 455 aa17.71■□□□□ 0.43
SHKBP1-205ENST00000594973 LCP1P13796 627 aa17.71■□□□□ 0.43
SHKBP1-205ENST00000594973 PNPLA4P41247 253 aa17.71■□□□□ 0.43
SHKBP1-205ENST00000594973 CACNA2D1P54289 1103 aa17.71■□□□□ 0.43
SHKBP1-205ENST00000594973 GDF10P55107 478 aa17.71■□□□□ 0.43
SHKBP1-205ENST00000594973 FCGRTP55899 365 aa17.71■□□□□ 0.43
SHKBP1-205ENST00000594973 GJA9P57773 515 aa17.71■□□□□ 0.43
SHKBP1-205ENST00000594973 LILRA4P59901 499 aa17.71■□□□□ 0.43
SHKBP1-205ENST00000594973 CCDC142Q17RM4 750 aa17.71■□□□□ 0.43
SHKBP1-205ENST00000594973 ARHGEF18Q6ZSZ5 1173 aa17.71■□□□□ 0.43
SHKBP1-205ENST00000594973 BBS12Q6ZW61 710 aa17.71■□□□□ 0.43
SHKBP1-205ENST00000594973 LCA5Q86VQ0 697 aa17.71■□□□□ 0.43
SHKBP1-205ENST00000594973 ADGRF2Q8IZF7 708 aa17.71■□□□□ 0.43
SHKBP1-205ENST00000594973 SLC35B2Q8TB61 432 aa17.71■□□□□ 0.43
SHKBP1-205ENST00000594973 FAM172AQ8WUF8 416 aa17.71■□□□□ 0.43
SHKBP1-205ENST00000594973 UCMAQ8WVF2 138 aa17.71■□□□□ 0.43
SHKBP1-205ENST00000594973 C9orf72Q96LT7 481 aa17.71■□□□□ 0.43
SHKBP1-205ENST00000594973 GBP5Q96PP8 586 aa17.71■□□□□ 0.43
SHKBP1-205ENST00000594973 TLL2Q9Y6L7 1015 aa17.71■□□□□ 0.43
SHKBP1-205ENST00000594973 USH1CQ9Y6N9 552 aa17.71■□□□□ 0.43
SHKBP1-205ENST00000594973 CA12O43570 354 aa17.7■□□□□ 0.42
SHKBP1-205ENST00000594973 DCTN3O75935 186 aa17.7■□□□□ 0.42
SHKBP1-205ENST00000594973 SDC4P31431 198 aa17.7■□□□□ 0.42
SHKBP1-205ENST00000594973 STX2P32856 288 aa17.7■□□□□ 0.42
SHKBP1-205ENST00000594973 GSTA3Q16772 222 aa17.7■□□□□ 0.42
SHKBP1-205ENST00000594973 HP1BP3Q5SSJ5 553 aaPredicted RBP17.7■□□□□ 0.42
SHKBP1-205ENST00000594973 CYP4V2Q6ZWL3 525 aaPredicted RBP17.7■□□□□ 0.42
SHKBP1-205ENST00000594973 PHC3Q8NDX5 983 aa17.7■□□□□ 0.42
SHKBP1-205ENST00000594973 GATA6Q92908 595 aa17.7■□□□□ 0.42
SHKBP1-205ENST00000594973 RBM15Q96T37 977 aaKnown RBP eCLIP17.7■□□□□ 0.42
SHKBP1-205ENST00000594973 NDNQ99608 321 aa17.7■□□□□ 0.42
SHKBP1-205ENST00000594973 MAK16Q9BXY0 300 aaKnown RBP17.7■□□□□ 0.42
SHKBP1-205ENST00000594973 GPATCH2LQ9NWQ4 482 aa17.7■□□□□ 0.42
SHKBP1-205ENST00000594973 GDAP2Q9NXN4 497 aa17.7■□□□□ 0.42
SHKBP1-205ENST00000594973 NINJ2Q9NZG7 142 aa17.7■□□□□ 0.42
SHKBP1-205ENST00000594973 EFR3BQ9Y2G0 817 aa17.7■□□□□ 0.42
SHKBP1-205ENST00000594973 STARD13Q9Y3M8 1113 aa17.7■□□□□ 0.42
SHKBP1-205ENST00000594973 DNALI1O14645 258 aaPredicted RBP17.7■□□□□ 0.42
SHKBP1-205ENST00000594973 GSTT1P30711 240 aa17.7■□□□□ 0.42
SHKBP1-205ENST00000594973 MLH1P40692 756 aa17.7■□□□□ 0.42
SHKBP1-205ENST00000594973 AFF1P51825 1210 aaKnown RBP17.7■□□□□ 0.42
SHKBP1-205ENST00000594973 PRKCZQ05513 592 aa17.7■□□□□ 0.42
SHKBP1-205ENST00000594973 RCN2Q14257 317 aa17.7■□□□□ 0.42
SHKBP1-205ENST00000594973 KPNB1Q14974 876 aaKnown RBP17.7■□□□□ 0.42
SHKBP1-205ENST00000594973 TAZQ16635 292 aa17.7■□□□□ 0.42
SHKBP1-205ENST00000594973 SV2CQ496J9 727 aa17.7■□□□□ 0.42
SHKBP1-205ENST00000594973 ARHGAP17Q68EM7 881 aa17.7■□□□□ 0.42
SHKBP1-205ENST00000594973 PPP1R21Q6ZMI0 780 aa17.7■□□□□ 0.42
SHKBP1-205ENST00000594973 KHSRPQ92945 711 aaKnown RBP eCLIP17.7■□□□□ 0.42
SHKBP1-205ENST00000594973 LPPQ93052 612 aa17.7■□□□□ 0.42
SHKBP1-205ENST00000594973 SLC7A6OSQ96CW6 309 aaPredicted RBP17.7■□□□□ 0.42
SHKBP1-205ENST00000594973 LRRC37BQ96QE4 947 aa17.7■□□□□ 0.42
SHKBP1-205ENST00000594973 SPC25Q9HBM1 224 aa17.7■□□□□ 0.42
SHKBP1-205ENST00000594973 TFE3P19532 575 aaPredicted RBP17.69■□□□□ 0.42
SHKBP1-205ENST00000594973 ACAT1P24752 427 aaKnown RBP17.69■□□□□ 0.42
SHKBP1-205ENST00000594973 BST2Q10589 180 aaKnown RBP17.69■□□□□ 0.42
SHKBP1-205ENST00000594973 CYP4F22Q6NT55 531 aa17.69■□□□□ 0.42
SHKBP1-205ENST00000594973 NPNTQ6UXI9 565 aa17.69■□□□□ 0.42
SHKBP1-205ENST00000594973 ANKRD52Q8NB46 1076 aa17.69■□□□□ 0.42
SHKBP1-205ENST00000594973 PITPNM3Q9BZ71 974 aa17.69■□□□□ 0.42
SHKBP1-205ENST00000594973 DENND2DQ9H6A0 471 aaPredicted RBP17.69■□□□□ 0.42
SHKBP1-205ENST00000594973 TRPV2Q9Y5S1 764 aa17.69■□□□□ 0.42
SHKBP1-205ENST00000594973 KPNA6O60684 536 aa17.69■□□□□ 0.42
SHKBP1-205ENST00000594973 BCAT1P54687 386 aa17.69■□□□□ 0.42
SHKBP1-205ENST00000594973 KRT81Q14533 505 aa17.69■□□□□ 0.42
SHKBP1-205ENST00000594973 FAM182AQ5T1J6 154 aa17.69■□□□□ 0.42
SHKBP1-205ENST00000594973 OSTM1Q86WC4 334 aa17.69■□□□□ 0.42
SHKBP1-205ENST00000594973 CRYBG2Q8N1P7 616 aa17.69■□□□□ 0.42
SHKBP1-205ENST00000594973 ZCCHC9Q8N567 271 aaKnown RBP17.69■□□□□ 0.42
SHKBP1-205ENST00000594973 TTC13Q8NBP0 860 aa17.69■□□□□ 0.42
SHKBP1-205ENST00000594973 SPATA18Q8TC71 538 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms