RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 CHST13Q8NET6 341 aa13.71□□□□□ -0.22
VRK3-209ENST00000594948 FBXO27Q8NI29 283 aa13.71□□□□□ -0.22
VRK3-209ENST00000594948 PIWIL2Q8TC59 973 aaKnown RBP13.71□□□□□ -0.22
VRK3-209ENST00000594948 FAM172AQ8WUF8 416 aa13.71□□□□□ -0.22
VRK3-209ENST00000594948 RILPQ96NA2 401 aa13.71□□□□□ -0.22
VRK3-209ENST00000594948 OLFM3Q96PB7 478 aa13.71□□□□□ -0.22
VRK3-209ENST00000594948 ZNF670Q9BS34 389 aa13.71□□□□□ -0.22
VRK3-209ENST00000594948 PPP1R12CQ9BZL4 782 aa13.71□□□□□ -0.22
VRK3-209ENST00000594948 ZNF277Q9NRM2 450 aaPredicted RBP13.71□□□□□ -0.22
VRK3-209ENST00000594948 ETAA1Q9NY74 926 aa13.71□□□□□ -0.22
VRK3-209ENST00000594948 SIX4Q9UIU6 781 aa13.71□□□□□ -0.22
VRK3-209ENST00000594948 TBC1D30Q9Y2I9 924 aa13.71□□□□□ -0.22
VRK3-209ENST00000594948 HMX2A2RU54 273 aa13.7□□□□□ -0.22
VRK3-209ENST00000594948 MDM4O15151 490 aa13.7□□□□□ -0.22
VRK3-209ENST00000594948 GLRA3O75311 464 aa13.7□□□□□ -0.22
VRK3-209ENST00000594948 P4HA1P13674 534 aa13.7□□□□□ -0.22
VRK3-209ENST00000594948 ALOX15P16050 662 aaPredicted RBP13.7□□□□□ -0.22
VRK3-209ENST00000594948 UBA1P22314 1058 aaKnown RBP13.7□□□□□ -0.22
VRK3-209ENST00000594948 IL4RP24394 825 aa13.7□□□□□ -0.22
VRK3-209ENST00000594948 CDK7P50613 346 aa13.7□□□□□ -0.22
VRK3-209ENST00000594948 ALDH18A1P54886 795 aaKnown RBP13.7□□□□□ -0.22
VRK3-209ENST00000594948 ZNF280AP59817 542 aaPredicted RBP13.7□□□□□ -0.22
VRK3-209ENST00000594948 IRX4P78413 519 aa13.7□□□□□ -0.22
VRK3-209ENST00000594948 C1orf228Q6PIY5 440 aa13.7□□□□□ -0.22
VRK3-209ENST00000594948 CATSPERGQ6ZRH7 1159 aa13.7□□□□□ -0.22
VRK3-209ENST00000594948 ZNF534Q76KX8 674 aa13.7□□□□□ -0.22
VRK3-209ENST00000594948 PIP4K2CQ8TBX8 421 aa13.7□□□□□ -0.22
VRK3-209ENST00000594948 SLC13A1Q9BZW2 595 aa13.7□□□□□ -0.22
VRK3-209ENST00000594948 FZD8Q9H461 694 aa13.7□□□□□ -0.22
VRK3-209ENST00000594948 PCDH18Q9HCL0 1135 aa13.7□□□□□ -0.22
VRK3-209ENST00000594948 PCMTD2Q9NV79 361 aa13.7□□□□□ -0.22
VRK3-209ENST00000594948 DNAJC28Q9NX36 388 aa13.7□□□□□ -0.22
VRK3-209ENST00000594948 MOCS1Q9NZB8 636 aa13.7□□□□□ -0.22
VRK3-209ENST00000594948 TNS1Q9HBL0 1735 aaKnown RBP13.7□□□□□ -0.22
VRK3-209ENST00000594948 ALDH1A2O94788 518 aa13.69□□□□□ -0.22
VRK3-209ENST00000594948 RTN3O95197 1032 aaPredicted RBP13.69□□□□□ -0.22
VRK3-209ENST00000594948 APBA3O96018 575 aa13.69□□□□□ -0.22
VRK3-209ENST00000594948 MLNP12872 115 aa13.69□□□□□ -0.22
VRK3-209ENST00000594948 PDGFRAP16234 1089 aa13.69□□□□□ -0.22
VRK3-209ENST00000594948 ZFXP17010 805 aaPredicted RBP13.69□□□□□ -0.22
VRK3-209ENST00000594948 DESP17661 470 aa13.69□□□□□ -0.22
VRK3-209ENST00000594948 PRDX6P30041 224 aa13.69□□□□□ -0.22
VRK3-209ENST00000594948 CXCL9Q07325 125 aa13.69□□□□□ -0.22
VRK3-209ENST00000594948 BMPR2Q13873 1038 aa13.69□□□□□ -0.22
VRK3-209ENST00000594948 STILQ15468 1287 aa13.69□□□□□ -0.22
VRK3-209ENST00000594948 ATF7IP2Q5U623 682 aa13.69□□□□□ -0.22
VRK3-209ENST00000594948 MBLAC2Q68D91 279 aa13.69□□□□□ -0.22
VRK3-209ENST00000594948 TRNP1Q6NT89 227 aa13.69□□□□□ -0.22
VRK3-209ENST00000594948 PGM2L1Q6PCE3 622 aa13.69□□□□□ -0.22
VRK3-209ENST00000594948 DHDDSQ86SQ9 333 aa13.69□□□□□ -0.22
VRK3-209ENST00000594948 PDSS2Q86YH6 399 aa13.69□□□□□ -0.22
VRK3-209ENST00000594948 ADGRF2Q8IZF7 708 aa13.69□□□□□ -0.22
VRK3-209ENST00000594948 SEPT1Q8WYJ6 367 aa13.69□□□□□ -0.22
VRK3-209ENST00000594948 TWNKQ96RR1 684 aa13.69□□□□□ -0.22
VRK3-209ENST00000594948 CENPKQ9BS16 269 aa13.69□□□□□ -0.22
VRK3-209ENST00000594948 C20orf27Q9GZN8 174 aa13.69□□□□□ -0.22
VRK3-209ENST00000594948 RPF1Q9H9Y2 349 aaKnown RBP13.69□□□□□ -0.22
VRK3-209ENST00000594948 IFT122Q9HBG6 1241 aa13.69□□□□□ -0.22
VRK3-209ENST00000594948 GBA2Q9HCG7 927 aaPredicted RBP13.69□□□□□ -0.22
VRK3-209ENST00000594948 DMAP1Q9NPF5 467 aaPredicted RBP13.69□□□□□ -0.22
VRK3-209ENST00000594948 CCDC195A0A1B0GUA6 201 aa13.69□□□□□ -0.22
VRK3-209ENST00000594948 CYB561D2O14569 222 aa13.69□□□□□ -0.22
VRK3-209ENST00000594948 STAU1O95793 577 aaKnown RBP13.69□□□□□ -0.22
VRK3-209ENST00000594948 APRTP07741 180 aa13.69□□□□□ -0.22
VRK3-209ENST00000594948 GRK2P25098 689 aa13.69□□□□□ -0.22
VRK3-209ENST00000594948 CLCN2P51788 898 aa13.69□□□□□ -0.22
VRK3-209ENST00000594948 HIRAP54198 1017 aaPredicted RBP13.69□□□□□ -0.22
VRK3-209ENST00000594948 INCA1Q0VD86 236 aa13.69□□□□□ -0.22
VRK3-209ENST00000594948 SEMA5AQ13591 1074 aa13.69□□□□□ -0.22
VRK3-209ENST00000594948 INSCQ1MX18 579 aa13.69□□□□□ -0.22
VRK3-209ENST00000594948 FASTKD1Q53R41 847 aaKnown RBP13.69□□□□□ -0.22
VRK3-209ENST00000594948 TEDDM1Q5T9Z0 273 aa13.69□□□□□ -0.22
VRK3-209ENST00000594948 LCLAT1Q6UWP7 414 aa13.69□□□□□ -0.22
VRK3-209ENST00000594948 CCNJLQ8IV13 435 aa13.69□□□□□ -0.22
VRK3-209ENST00000594948 ST13P4Q8IZP2 240 aaPredicted RBP13.69□□□□□ -0.22
VRK3-209ENST00000594948 C1orf127Q8N9H9 656 aa13.69□□□□□ -0.22
VRK3-209ENST00000594948 RNF149Q8NC42 400 aa13.69□□□□□ -0.22
VRK3-209ENST00000594948 PCDH19Q8TAB3 1148 aa13.69□□□□□ -0.22
VRK3-209ENST00000594948 DEPDC1BQ8WUY9 529 aa13.69□□□□□ -0.22
VRK3-209ENST00000594948 NLRP4Q96MN2 994 aa13.69□□□□□ -0.22
VRK3-209ENST00000594948 DCDC2Q9UHG0 476 aa13.69□□□□□ -0.22
VRK3-209ENST00000594948 PPM1HQ9ULR3 514 aa13.69□□□□□ -0.22
VRK3-209ENST00000594948 APOBEC2Q9Y235 224 aaKnown RBP13.69□□□□□ -0.22
VRK3-209ENST00000594948 TNFSF13BQ9Y275 285 aa13.69□□□□□ -0.22
VRK3-209ENST00000594948 UGT1A9O60656 530 aa13.68□□□□□ -0.22
VRK3-209ENST00000594948 GSRP00390 522 aa13.68□□□□□ -0.22
VRK3-209ENST00000594948 KRT19P08727 400 aa13.68□□□□□ -0.22
VRK3-209ENST00000594948 C6orf222P0C671 652 aaPredicted RBP13.68□□□□□ -0.22
VRK3-209ENST00000594948 UBTFL6P0CB48 400 aaPredicted RBP13.68□□□□□ -0.22
VRK3-209ENST00000594948 SETSIPP0DME0 302 aa13.68□□□□□ -0.22
VRK3-209ENST00000594948 TGFB3P10600 412 aa13.68□□□□□ -0.22
VRK3-209ENST00000594948 FGF3P11487 239 aaPredicted RBP13.68□□□□□ -0.22
VRK3-209ENST00000594948 PTPRAP18433 802 aa13.68□□□□□ -0.22
VRK3-209ENST00000594948 EDNRBP24530 442 aa13.68□□□□□ -0.22
VRK3-209ENST00000594948 NR2C2P49116 596 aa13.68□□□□□ -0.22
VRK3-209ENST00000594948 COPAP53621 1224 aa13.68□□□□□ -0.22
VRK3-209ENST00000594948 CDH8P55286 799 aa13.68□□□□□ -0.22
VRK3-209ENST00000594948 ASPHQ12797 758 aa13.68□□□□□ -0.22
VRK3-209ENST00000594948 CCDC14Q49A88 953 aa13.68□□□□□ -0.22
VRK3-209ENST00000594948 OR6B2Q6IFH4 312 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms