RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 CAMK4Q16566 473 aa24.6■■□□□ 1.53
LSM4-204ENST00000594828 RRAGAQ7L523 313 aa24.6■■□□□ 1.53
LSM4-204ENST00000594828 SIX6OS1Q8N1H7 587 aa24.6■■□□□ 1.53
LSM4-204ENST00000594828 C12orf50Q8NA57 414 aaPredicted RBP24.6■■□□□ 1.53
LSM4-204ENST00000594828 TFAP2BQ92481 460 aa24.6■■□□□ 1.53
LSM4-204ENST00000594828 BHMTQ93088 406 aa24.6■■□□□ 1.53
LSM4-204ENST00000594828 PLK2Q9NYY3 685 aa24.6■■□□□ 1.53
LSM4-204ENST00000594828 KIAA1468Q9P260 1216 aa24.6■■□□□ 1.53
LSM4-204ENST00000594828 BCCIPQ9P287 314 aaKnown RBP eCLIP24.6■■□□□ 1.53
LSM4-204ENST00000594828 GDF9O60383 454 aa24.59■■□□□ 1.53
LSM4-204ENST00000594828 AFPP02771 609 aaKnown RBP24.59■■□□□ 1.53
LSM4-204ENST00000594828 MPLP40238 635 aa24.59■■□□□ 1.53
LSM4-204ENST00000594828 DGKGP49619 791 aa24.59■■□□□ 1.53
LSM4-204ENST00000594828 CNGA2Q16280 664 aa24.59■■□□□ 1.53
LSM4-204ENST00000594828 AASDHQ4L235 1098 aaPredicted RBP24.59■■□□□ 1.53
LSM4-204ENST00000594828 PKDCCQ504Y2 493 aa24.59■■□□□ 1.53
LSM4-204ENST00000594828 PLA2G2CQ5R387 149 aa24.59■■□□□ 1.53
LSM4-204ENST00000594828 BHLHA9Q7RTU4 235 aa24.59■■□□□ 1.53
LSM4-204ENST00000594828 DENND1CQ8IV53 801 aa24.59■■□□□ 1.53
LSM4-204ENST00000594828 PGBD3Q8N328 593 aa24.59■■□□□ 1.53
LSM4-204ENST00000594828 OLIG1Q8TAK6 271 aa24.59■■□□□ 1.53
LSM4-204ENST00000594828 HMGB4Q8WW32 186 aa24.59■■□□□ 1.53
LSM4-204ENST00000594828 OLA1Q9NTK5 396 aaKnown RBP24.59■■□□□ 1.53
LSM4-204ENST00000594828 CHMP5Q9NZZ3 219 aa24.59■■□□□ 1.53
LSM4-204ENST00000594828 AGO1Q9UL18 857 aaKnown RBP24.59■■□□□ 1.53
LSM4-204ENST00000594828 HCN2Q9UL51 889 aa24.59■■□□□ 1.53
LSM4-204ENST00000594828 TCRBV21S2A2A0A5A6 115 aa24.58■■□□□ 1.53
LSM4-204ENST00000594828 MED19A0JLT2 244 aaPredicted RBP24.58■■□□□ 1.53
LSM4-204ENST00000594828 DCDC2BA2VCK2 349 aa24.58■■□□□ 1.53
LSM4-204ENST00000594828 SLC30A4O14863 429 aa24.58■■□□□ 1.53
LSM4-204ENST00000594828 CISD3P0C7P0 127 aa24.58■■□□□ 1.53
LSM4-204ENST00000594828 LCP1P13796 627 aa24.58■■□□□ 1.53
LSM4-204ENST00000594828 NTSR1P30989 418 aa24.58■■□□□ 1.53
LSM4-204ENST00000594828 GCNT1Q02742 428 aa24.58■■□□□ 1.53
LSM4-204ENST00000594828 CREB5Q02930 508 aa24.58■■□□□ 1.53
LSM4-204ENST00000594828 STILQ15468 1287 aa24.58■■□□□ 1.53
LSM4-204ENST00000594828 BSPRYQ5W0U4 402 aa24.58■■□□□ 1.53
LSM4-204ENST00000594828 SDE2Q6IQ49 451 aa24.58■■□□□ 1.53
LSM4-204ENST00000594828 TOGARAM2Q6ZUX3 1019 aa24.58■■□□□ 1.53
LSM4-204ENST00000594828 ARHGEF19Q8IW93 802 aa24.58■■□□□ 1.53
LSM4-204ENST00000594828 RNF139Q8WU17 664 aa24.58■■□□□ 1.53
LSM4-204ENST00000594828 SLC35F5Q8WV83 523 aa24.58■■□□□ 1.53
LSM4-204ENST00000594828 CNGB3Q9NQW8 809 aa24.58■■□□□ 1.53
LSM4-204ENST00000594828 SPAG17Q6Q759 2223 aa24.58■■□□□ 1.52
LSM4-204ENST00000594828 YJEFN3A6XGL0 299 aa24.57■■□□□ 1.52
LSM4-204ENST00000594828 PRRT4C9JH25 899 aa24.57■■□□□ 1.52
LSM4-204ENST00000594828 E7ENQ6 273 aa24.57■■□□□ 1.52
LSM4-204ENST00000594828 EGFLAMQ63HQ2 1017 aa24.57■■□□□ 1.52
LSM4-204ENST00000594828 PMS2CLQ68D20 193 aa24.57■■□□□ 1.52
LSM4-204ENST00000594828 SCML4Q8N228 414 aa24.57■■□□□ 1.52
LSM4-204ENST00000594828 RBBP8NLQ8NC74 664 aaPredicted RBP24.57■■□□□ 1.52
LSM4-204ENST00000594828 PLD4Q96BZ4 506 aa24.57■■□□□ 1.52
LSM4-204ENST00000594828 ZSWIM1Q9BR11 485 aa24.57■■□□□ 1.52
LSM4-204ENST00000594828 VPS45Q9NRW7 570 aa24.57■■□□□ 1.52
LSM4-204ENST00000594828 ABCC13Q9NSE7 274 aa24.57■■□□□ 1.52
LSM4-204ENST00000594828 RWDD2AQ9UIY3 292 aa24.57■■□□□ 1.52
LSM4-204ENST00000594828 FBXO10Q9UK96 956 aa24.57■■□□□ 1.52
LSM4-204ENST00000594828 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.57■■□□□ 1.52
LSM4-204ENST00000594828 CEP250Q9BV73 2442 aa24.57■■□□□ 1.52
LSM4-204ENST00000594828 SDK1Q7Z5N4 2213 aa24.57■■□□□ 1.52
LSM4-204ENST00000594828 PENKP01210 267 aaPredicted RBP24.56■■□□□ 1.52
LSM4-204ENST00000594828 HOXB2P14652 356 aa24.56■■□□□ 1.52
LSM4-204ENST00000594828 BCKDHBP21953 392 aa24.56■■□□□ 1.52
LSM4-204ENST00000594828 BRD2P25440 801 aaKnown RBP24.56■■□□□ 1.52
LSM4-204ENST00000594828 WASP42768 502 aa24.56■■□□□ 1.52
LSM4-204ENST00000594828 RGS7P49802 495 aa24.56■■□□□ 1.52
LSM4-204ENST00000594828 FYB2Q5VWT5 728 aa24.56■■□□□ 1.52
LSM4-204ENST00000594828 PMF1Q6P1K2 205 aa24.56■■□□□ 1.52
LSM4-204ENST00000594828 FMNL3Q8IVF7 1028 aa24.56■■□□□ 1.52
LSM4-204ENST00000594828 CHPFQ8IZ52 775 aa24.56■■□□□ 1.52
LSM4-204ENST00000594828 RLN3Q8WXF3 142 aa24.56■■□□□ 1.52
LSM4-204ENST00000594828 EDEM1Q92611 657 aa24.56■■□□□ 1.52
LSM4-204ENST00000594828 P2RY11Q96G91 374 aa24.56■■□□□ 1.52
LSM4-204ENST00000594828 SPACA7Q96KW9 195 aa24.56■■□□□ 1.52
LSM4-204ENST00000594828 ACOX2Q99424 681 aa24.56■■□□□ 1.52
LSM4-204ENST00000594828 INTS2Q9H0H0 1204 aaKnown RBP24.56■■□□□ 1.52
LSM4-204ENST00000594828 SMOC1Q9H4F8 434 aa24.56■■□□□ 1.52
LSM4-204ENST00000594828 BCLAF3A2AJT9 711 aaKnown RBP24.55■■□□□ 1.52
LSM4-204ENST00000594828 M0QYV0 167 aa24.55■■□□□ 1.52
LSM4-204ENST00000594828 MAP3K13O43283 966 aa24.55■■□□□ 1.52
LSM4-204ENST00000594828 CAVIN2O95810 425 aa24.55■■□□□ 1.52
LSM4-204ENST00000594828 CALCAP01258 141 aa24.55■■□□□ 1.52
LSM4-204ENST00000594828 CYBBP04839 570 aa24.55■■□□□ 1.52
LSM4-204ENST00000594828 P2RY2P41231 377 aa24.55■■□□□ 1.52
LSM4-204ENST00000594828 DAOAP59103 153 aa24.55■■□□□ 1.52
LSM4-204ENST00000594828 BYSLQ13895 437 aaKnown RBP24.55■■□□□ 1.52
LSM4-204ENST00000594828 TRIP4Q15650 581 aaPredicted RBP24.55■■□□□ 1.52
LSM4-204ENST00000594828 CREBRFQ8IUR6 639 aa24.55■■□□□ 1.52
LSM4-204ENST00000594828 CPXM2Q8N436 756 aa24.55■■□□□ 1.52
LSM4-204ENST00000594828 KREMEN1Q96MU8 473 aa24.55■■□□□ 1.52
LSM4-204ENST00000594828 SFMBT1Q9UHJ3 866 aa24.55■■□□□ 1.52
LSM4-204ENST00000594828 HBS1LQ9Y450 684 aaKnown RBP24.55■■□□□ 1.52
LSM4-204ENST00000594828 ZBTB24O43167 697 aaPredicted RBP24.54■■□□□ 1.52
LSM4-204ENST00000594828 GABBR2O75899 941 aa24.54■■□□□ 1.52
LSM4-204ENST00000594828 HARS2P49590 506 aaKnown RBP24.54■■□□□ 1.52
LSM4-204ENST00000594828 ZNF132P52740 706 aa24.54■■□□□ 1.52
LSM4-204ENST00000594828 UBE2TQ9NPD8 197 aaPredicted RBP24.54■■□□□ 1.52
LSM4-204ENST00000594828 RXFP3Q9NSD7 469 aa24.54■■□□□ 1.52
LSM4-204ENST00000594828 SLC27A6Q9Y2P4 619 aa24.54■■□□□ 1.52
LSM4-204ENST00000594828 DNAH14Q0VDD8 3507 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms