RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 TRIML1Q8N9V2 468 aa15.52■□□□□ 0.08
PNKP-202ENST00000593706 GABRG3Q99928 467 aa15.52■□□□□ 0.08
PNKP-202ENST00000593706 TMEM121BQ9BXQ6 578 aaPredicted RBP15.52■□□□□ 0.08
PNKP-202ENST00000593706 DNAI2Q9GZS0 605 aa15.52■□□□□ 0.08
PNKP-202ENST00000593706 CAPN10Q9HC96 672 aa15.52■□□□□ 0.08
PNKP-202ENST00000593706 OSER1Q9NX31 292 aa15.52■□□□□ 0.08
PNKP-202ENST00000593706 CACNA2D2Q9NY47 1150 aa15.52■□□□□ 0.08
PNKP-202ENST00000593706 NUDT5Q9UKK9 219 aa15.52■□□□□ 0.08
PNKP-202ENST00000593706 HCN2Q9UL51 889 aa15.52■□□□□ 0.08
PNKP-202ENST00000593706 SCML2Q9UQR0 700 aa15.52■□□□□ 0.08
PNKP-202ENST00000593706 NEUROG3Q9Y4Z2 214 aa15.52■□□□□ 0.08
PNKP-202ENST00000593706 PCDHA5Q9Y5H7 936 aa15.52■□□□□ 0.08
PNKP-202ENST00000593706 RAD54BQ9Y620 910 aa15.52■□□□□ 0.08
PNKP-202ENST00000593706 CELSR3Q9NYQ7 3312 aa15.52■□□□□ 0.07
PNKP-202ENST00000593706 NUMA1Q14980 2115 aa15.52■□□□□ 0.07
PNKP-202ENST00000593706 A0A1W2PQH9 124 aa15.51■□□□□ 0.07
PNKP-202ENST00000593706 PRRT4C9JH25 899 aa15.51■□□□□ 0.07
PNKP-202ENST00000593706 KIF20AO95235 890 aa15.51■□□□□ 0.07
PNKP-202ENST00000593706 RARGP13631 454 aa15.51■□□□□ 0.07
PNKP-202ENST00000593706 C1orf220Q5T0J3 134 aa15.51■□□□□ 0.07
PNKP-202ENST00000593706 SYCP2LQ5T4T6 812 aa15.51■□□□□ 0.07
PNKP-202ENST00000593706 SV2AQ7L0J3 742 aa15.51■□□□□ 0.07
PNKP-202ENST00000593706 PIP4P1Q86T03 277 aa15.51■□□□□ 0.07
PNKP-202ENST00000593706 TADA2BQ86TJ2 420 aa15.51■□□□□ 0.07
PNKP-202ENST00000593706 SLC41A1Q8IVJ1 513 aa15.51■□□□□ 0.07
PNKP-202ENST00000593706 GUF1Q8N442 669 aaKnown RBP15.51■□□□□ 0.07
PNKP-202ENST00000593706 OR2I1PQ8NGU4 316 aa15.51■□□□□ 0.07
PNKP-202ENST00000593706 SPATA20Q8TB22 786 aa15.51■□□□□ 0.07
PNKP-202ENST00000593706 TMC2Q8TDI7 906 aa15.51■□□□□ 0.07
PNKP-202ENST00000593706 CYFIP2Q96F07 1278 aa15.51■□□□□ 0.07
PNKP-202ENST00000593706 SLC6A17Q9H1V8 727 aa15.51■□□□□ 0.07
PNKP-202ENST00000593706 PLK2Q9NYY3 685 aa15.51■□□□□ 0.07
PNKP-202ENST00000593706 DNMT3LQ9UJW3 386 aa15.51■□□□□ 0.07
PNKP-202ENST00000593706 NAGPAQ9UK23 515 aa15.51■□□□□ 0.07
PNKP-202ENST00000593706 PLXNB3Q9ULL4 1909 aa15.51■□□□□ 0.07
PNKP-202ENST00000593706 KNL1Q8NG31 2342 aa15.5■□□□□ 0.07
PNKP-202ENST00000593706 UPK3BL1B0FP48 263 aa15.5■□□□□ 0.07
PNKP-202ENST00000593706 UPK3BL2E5RIL1 263 aa15.5■□□□□ 0.07
PNKP-202ENST00000593706 ARHGAP33O14559 1287 aa15.5■□□□□ 0.07
PNKP-202ENST00000593706 CALUO43852 315 aaPredicted RBP15.5■□□□□ 0.07
PNKP-202ENST00000593706 GREM1O60565 184 aa15.5■□□□□ 0.07
PNKP-202ENST00000593706 CD58P19256 250 aa15.5■□□□□ 0.07
PNKP-202ENST00000593706 MCCD1P59942 119 aaPredicted RBP15.5■□□□□ 0.07
PNKP-202ENST00000593706 INCA1Q0VD86 236 aa15.5■□□□□ 0.07
PNKP-202ENST00000593706 PNOCQ13519 176 aa15.5■□□□□ 0.07
PNKP-202ENST00000593706 STARD3Q14849 445 aa15.5■□□□□ 0.07
PNKP-202ENST00000593706 PLEKHG6Q3KR16 790 aa15.5■□□□□ 0.07
PNKP-202ENST00000593706 KLHDC10Q6PID8 442 aa15.5■□□□□ 0.07
PNKP-202ENST00000593706 CCDC150Q8NCX0 1101 aa15.5■□□□□ 0.07
PNKP-202ENST00000593706 MRGPRX1Q96LB2 322 aa15.5■□□□□ 0.07
PNKP-202ENST00000593706 TWNKQ96RR1 684 aa15.5■□□□□ 0.07
PNKP-202ENST00000593706 HNRNPABQ99729 332 aaKnown RBP15.5■□□□□ 0.07
PNKP-202ENST00000593706 NT5C1AQ9BXI3 368 aa15.5■□□□□ 0.07
PNKP-202ENST00000593706 NMUR1Q9HB89 426 aa15.5■□□□□ 0.07
PNKP-202ENST00000593706 PNPLA8Q9NP80 782 aa15.5■□□□□ 0.07
PNKP-202ENST00000593706 CD93Q9NPY3 652 aa15.5■□□□□ 0.07
PNKP-202ENST00000593706 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.5■□□□□ 0.07
PNKP-202ENST00000593706 SUSD2Q9UGT4 822 aa15.5■□□□□ 0.07
PNKP-202ENST00000593706 KLK13Q9UKR3 277 aa15.5■□□□□ 0.07
PNKP-202ENST00000593706 ADAMTS20P59510 1910 aa15.5■□□□□ 0.07
PNKP-202ENST00000593706 LOC400499M0QZD8 3231 aa15.5■□□□□ 0.07
PNKP-202ENST00000593706 ACACAQ13085 2346 aa15.5■□□□□ 0.07
PNKP-202ENST00000593706 MUC22E2RYF6 1773 aaPredicted RBP15.49■□□□□ 0.07
PNKP-202ENST00000593706 MEI4A8MW99 385 aa15.49■□□□□ 0.07
PNKP-202ENST00000593706 HHLA1C9JL84 531 aa15.49■□□□□ 0.07
PNKP-202ENST00000593706 H0Y626 953 aa15.49■□□□□ 0.07
PNKP-202ENST00000593706 GFRA2O00451 464 aa15.49■□□□□ 0.07
PNKP-202ENST00000593706 IKBKBO14920 756 aa15.49■□□□□ 0.07
PNKP-202ENST00000593706 MAPK13O15264 365 aa15.49■□□□□ 0.07
PNKP-202ENST00000593706 TRIM16O95361 564 aa15.49■□□□□ 0.07
PNKP-202ENST00000593706 GNSP15586 552 aa15.49■□□□□ 0.07
PNKP-202ENST00000593706 PLA2G4AP47712 749 aa15.49■□□□□ 0.07
PNKP-202ENST00000593706 PSEN1P49768 467 aa15.49■□□□□ 0.07
PNKP-202ENST00000593706 VAMP7P51809 220 aa15.49■□□□□ 0.07
PNKP-202ENST00000593706 FOXJ1Q92949 421 aa15.49■□□□□ 0.07
PNKP-202ENST00000593706 FAM124BQ9H5Z6 455 aaPredicted RBP15.49■□□□□ 0.07
PNKP-202ENST00000593706 MMRN2Q9H8L6 949 aa15.49■□□□□ 0.07
PNKP-202ENST00000593706 CD248Q9HCU0 757 aa15.49■□□□□ 0.07
PNKP-202ENST00000593706 RASAL2Q9UJF2 1139 aa15.49■□□□□ 0.07
PNKP-202ENST00000593706 MSRB2Q9Y3D2 182 aa15.49■□□□□ 0.07
PNKP-202ENST00000593706 CABIN1Q9Y6J0 2220 aa15.49■□□□□ 0.07
PNKP-202ENST00000593706 WASH3PC4AMC7 463 aa15.48■□□□□ 0.07
PNKP-202ENST00000593706 STC2O76061 302 aa15.48■□□□□ 0.07
PNKP-202ENST00000593706 HMBSP08397 361 aa15.48■□□□□ 0.07
PNKP-202ENST00000593706 TRIM49P0CI25 452 aa15.48■□□□□ 0.07
PNKP-202ENST00000593706 TRIM49CP0CI26 452 aa15.48■□□□□ 0.07
PNKP-202ENST00000593706 RALAP11233 206 aa15.48■□□□□ 0.07
PNKP-202ENST00000593706 KRT13P13646 458 aa15.48■□□□□ 0.07
PNKP-202ENST00000593706 NR2F2P24468 414 aa15.48■□□□□ 0.07
PNKP-202ENST00000593706 HNRNPDQ14103 355 aaKnown RBP15.48■□□□□ 0.07
PNKP-202ENST00000593706 COBLL1Q53SF7 1204 aa15.48■□□□□ 0.07
PNKP-202ENST00000593706 WDR45BQ5MNZ6 344 aa15.48■□□□□ 0.07
PNKP-202ENST00000593706 Q6ZNB5 142 aa15.48■□□□□ 0.07
PNKP-202ENST00000593706 SMYD4Q8IYR2 804 aaPredicted RBP15.48■□□□□ 0.07
PNKP-202ENST00000593706 CCDC47Q96A33 483 aaKnown RBP15.48■□□□□ 0.07
PNKP-202ENST00000593706 CDK5RAP1Q96SZ6 601 aaKnown RBP15.48■□□□□ 0.07
PNKP-202ENST00000593706 NIF3L1Q9GZT8 377 aa15.48■□□□□ 0.07
PNKP-202ENST00000593706 CYP3A43Q9HB55 503 aa15.48■□□□□ 0.07
PNKP-202ENST00000593706 DNAAF2Q9NVR5 837 aaKnown RBP15.48■□□□□ 0.07
PNKP-202ENST00000593706 MAPK8IP1Q9UQF2 711 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms