RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 SCD5Q86SK9 330 aa18.39■□□□□ 0.53
RETREG3-212ENST00000593251 ZNF419Q96HQ0 510 aaPredicted RBP18.39■□□□□ 0.53
RETREG3-212ENST00000593251 NT5C1AQ9BXI3 368 aa18.39■□□□□ 0.53
RETREG3-212ENST00000593251 MMRN2Q9H8L6 949 aa18.39■□□□□ 0.53
RETREG3-212ENST00000593251 FRMD4BQ9Y2L6 1034 aa18.39■□□□□ 0.53
RETREG3-212ENST00000593251 STON1Q9Y6Q2 735 aa18.39■□□□□ 0.53
RETREG3-212ENST00000593251 IKBKBO14920 756 aa18.38■□□□□ 0.53
RETREG3-212ENST00000593251 KLKB1P03952 638 aa18.38■□□□□ 0.53
RETREG3-212ENST00000593251 SYPP08247 313 aa18.38■□□□□ 0.53
RETREG3-212ENST00000593251 PDIA4P13667 645 aaKnown RBP18.38■□□□□ 0.53
RETREG3-212ENST00000593251 TRIM21P19474 475 aaKnown RBP18.38■□□□□ 0.53
RETREG3-212ENST00000593251 GCLMP48507 274 aa18.38■□□□□ 0.53
RETREG3-212ENST00000593251 VAMP7P51809 220 aa18.38■□□□□ 0.53
RETREG3-212ENST00000593251 KIF11P52732 1056 aa18.38■□□□□ 0.53
RETREG3-212ENST00000593251 DNM1Q05193 864 aaKnown RBP18.38■□□□□ 0.53
RETREG3-212ENST00000593251 PKP1Q13835 747 aa18.38■□□□□ 0.53
RETREG3-212ENST00000593251 KLHDC10Q6PID8 442 aa18.38■□□□□ 0.53
RETREG3-212ENST00000593251 TAS1R2Q8TE23 839 aa18.38■□□□□ 0.53
RETREG3-212ENST00000593251 TMEM174Q8WUU8 243 aa18.38■□□□□ 0.53
RETREG3-212ENST00000593251 RASAL2Q9UJF2 1139 aa18.38■□□□□ 0.53
RETREG3-212ENST00000593251 DSPP15924 2871 aaKnown RBP18.37■□□□□ 0.53
RETREG3-212ENST00000593251 PLXNB3Q9ULL4 1909 aa18.37■□□□□ 0.53
RETREG3-212ENST00000593251 A0A1B0GVL5 298 aa18.37■□□□□ 0.53
RETREG3-212ENST00000593251 GFRA2O00451 464 aa18.37■□□□□ 0.53
RETREG3-212ENST00000593251 SH3BP5O60239 455 aa18.37■□□□□ 0.53
RETREG3-212ENST00000593251 PPP3CAQ08209 521 aa18.37■□□□□ 0.53
RETREG3-212ENST00000593251 GEN1Q17RS7 908 aa18.37■□□□□ 0.53
RETREG3-212ENST00000593251 FUT11Q495W5 492 aa18.37■□□□□ 0.53
RETREG3-212ENST00000593251 ZNF394Q53GI3 561 aa18.37■□□□□ 0.53
RETREG3-212ENST00000593251 SYCP2LQ5T4T6 812 aa18.37■□□□□ 0.53
RETREG3-212ENST00000593251 PPP1R26Q5T8A7 1209 aaPredicted RBP18.37■□□□□ 0.53
RETREG3-212ENST00000593251 SPRYD3Q8NCJ5 442 aa18.37■□□□□ 0.53
RETREG3-212ENST00000593251 IMPG2Q9BZV3 1241 aa18.37■□□□□ 0.53
RETREG3-212ENST00000593251 PNPLA8Q9NP80 782 aa18.37■□□□□ 0.53
RETREG3-212ENST00000593251 DNAAF2Q9NVR5 837 aaKnown RBP18.37■□□□□ 0.53
RETREG3-212ENST00000593251 FBXO10Q9UK96 956 aa18.37■□□□□ 0.53
RETREG3-212ENST00000593251 PTPRBP23467 1997 aa18.37■□□□□ 0.53
RETREG3-212ENST00000593251 PKD1L2Q7Z442 2459 aa18.37■□□□□ 0.53
RETREG3-212ENST00000593251 NBEAQ8NFP9 2946 aa18.36■□□□□ 0.53
RETREG3-212ENST00000593251 CALUO43852 315 aaPredicted RBP18.36■□□□□ 0.53
RETREG3-212ENST00000593251 CILPO75339 1184 aa18.36■□□□□ 0.53
RETREG3-212ENST00000593251 GJB3O75712 270 aa18.36■□□□□ 0.53
RETREG3-212ENST00000593251 PFKFB1P16118 471 aa18.36■□□□□ 0.53
RETREG3-212ENST00000593251 CD6P30203 668 aa18.36■□□□□ 0.53
RETREG3-212ENST00000593251 IL12RB1P42701 662 aa18.36■□□□□ 0.53
RETREG3-212ENST00000593251 MFAP3P55082 362 aa18.36■□□□□ 0.53
RETREG3-212ENST00000593251 EFEMP1Q12805 493 aa18.36■□□□□ 0.53
RETREG3-212ENST00000593251 FYB2Q5VWT5 728 aa18.36■□□□□ 0.53
RETREG3-212ENST00000593251 ZFYVE26Q68DK2 2539 aa18.36■□□□□ 0.53
RETREG3-212ENST00000593251 CCDC186Q7Z3E2 898 aa18.36■□□□□ 0.53
RETREG3-212ENST00000593251 TMEM131Q92545 1883 aa18.36■□□□□ 0.53
RETREG3-212ENST00000593251 TOE1Q96GM8 510 aaKnown RBP18.36■□□□□ 0.53
RETREG3-212ENST00000593251 GPR174Q9BXC1 333 aa18.36■□□□□ 0.53
RETREG3-212ENST00000593251 DUSP16Q9BY84 665 aa18.36■□□□□ 0.53
RETREG3-212ENST00000593251 NIF3L1Q9GZT8 377 aa18.36■□□□□ 0.53
RETREG3-212ENST00000593251 MKRN2Q9H000 416 aaKnown RBP18.36■□□□□ 0.53
RETREG3-212ENST00000593251 FAM124BQ9H5Z6 455 aaPredicted RBP18.36■□□□□ 0.53
RETREG3-212ENST00000593251 PRDM16Q9HAZ2 1276 aa18.36■□□□□ 0.53
RETREG3-212ENST00000593251 CYP3A43Q9HB55 503 aa18.36■□□□□ 0.53
RETREG3-212ENST00000593251 RCOR1Q9UKL0 485 aa18.36■□□□□ 0.53
RETREG3-212ENST00000593251 MAPK8IP1Q9UQF2 711 aa18.36■□□□□ 0.53
RETREG3-212ENST00000593251 MEI4A8MW99 385 aa18.35■□□□□ 0.53
RETREG3-212ENST00000593251 KCNJ18B7U540 433 aa18.35■□□□□ 0.53
RETREG3-212ENST00000593251 H0Y626 953 aa18.35■□□□□ 0.53
RETREG3-212ENST00000593251 TRIM16O95361 564 aa18.35■□□□□ 0.53
RETREG3-212ENST00000593251 PENKP01210 267 aaPredicted RBP18.35■□□□□ 0.53
RETREG3-212ENST00000593251 PRR29P0C7W0 189 aa18.35■□□□□ 0.53
RETREG3-212ENST00000593251 RALAP11233 206 aa18.35■□□□□ 0.53
RETREG3-212ENST00000593251 NR2F2P24468 414 aa18.35■□□□□ 0.53
RETREG3-212ENST00000593251 CORO1AP31146 461 aaKnown RBP18.35■□□□□ 0.53
RETREG3-212ENST00000593251 RDXP35241 583 aaKnown RBP18.35■□□□□ 0.53
RETREG3-212ENST00000593251 PSEN1P49768 467 aa18.35■□□□□ 0.53
RETREG3-212ENST00000593251 GRIK2Q13002 908 aa18.35■□□□□ 0.53
RETREG3-212ENST00000593251 STARD3Q14849 445 aa18.35■□□□□ 0.53
RETREG3-212ENST00000593251 TRIP6Q15654 476 aaKnown RBP18.35■□□□□ 0.53
RETREG3-212ENST00000593251 WDR45BQ5MNZ6 344 aa18.35■□□□□ 0.53
RETREG3-212ENST00000593251 CACUL1Q86Y37 369 aa18.35■□□□□ 0.53
RETREG3-212ENST00000593251 PNPLA1Q8N8W4 532 aa18.35■□□□□ 0.53
RETREG3-212ENST00000593251 FOXJ1Q92949 421 aa18.35■□□□□ 0.53
RETREG3-212ENST00000593251 WSB2Q9NYS7 404 aaPredicted RBP18.35■□□□□ 0.53
RETREG3-212ENST00000593251 THAP10Q9P2Z0 257 aaPredicted RBP18.35■□□□□ 0.53
RETREG3-212ENST00000593251 SUSD2Q9UGT4 822 aa18.35■□□□□ 0.53
RETREG3-212ENST00000593251 CFAP45Q9UL16 551 aa18.35■□□□□ 0.53
RETREG3-212ENST00000593251 CLEC4EQ9ULY5 219 aa18.35■□□□□ 0.53
RETREG3-212ENST00000593251 TRAF3IP3Q9Y228 551 aa18.35■□□□□ 0.53
RETREG3-212ENST00000593251 SLC27A6Q9Y2P4 619 aa18.35■□□□□ 0.53
RETREG3-212ENST00000593251 USP3Q9Y6I4 520 aa18.35■□□□□ 0.53
RETREG3-212ENST00000593251 FREM2Q5SZK8 3169 aa18.35■□□□□ 0.53
RETREG3-212ENST00000593251 NUMA1Q14980 2115 aa18.34■□□□□ 0.53
RETREG3-212ENST00000593251 HSP90AA1P07900 732 aaKnown RBP18.34■□□□□ 0.53
RETREG3-212ENST00000593251 NCAM1P13591 858 aa18.34■□□□□ 0.53
RETREG3-212ENST00000593251 GNSP15586 552 aa18.34■□□□□ 0.53
RETREG3-212ENST00000593251 RING1Q06587 406 aa18.34■□□□□ 0.53
RETREG3-212ENST00000593251 RAB44Q7Z6P3 723 aaPredicted RBP18.34■□□□□ 0.53
RETREG3-212ENST00000593251 TADA2BQ86TJ2 420 aa18.34■□□□□ 0.53
RETREG3-212ENST00000593251 DENND1CQ8IV53 801 aa18.34■□□□□ 0.53
RETREG3-212ENST00000593251 NAXDQ8IW45 347 aa18.34■□□□□ 0.53
RETREG3-212ENST00000593251 FAM186BQ8IYM0 893 aa18.34■□□□□ 0.53
RETREG3-212ENST00000593251 ZCCHC9Q8N567 271 aaKnown RBP18.34■□□□□ 0.53
RETREG3-212ENST00000593251 SNX21Q969T3 373 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms