RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 ATP11AP98196 1134 aa14.04□□□□□ -0.16
VMP1-217ENST00000593168 ZNF211Q13398 564 aaPredicted RBP14.04□□□□□ -0.16
VMP1-217ENST00000593168 DCAF6Q58WW2 860 aa14.04□□□□□ -0.16
VMP1-217ENST00000593168 SH3PXD2AQ5TCZ1 1133 aa14.04□□□□□ -0.16
VMP1-217ENST00000593168 BSPRYQ5W0U4 402 aa14.04□□□□□ -0.16
VMP1-217ENST00000593168 DENND5BQ6ZUT9 1274 aa14.04□□□□□ -0.16
VMP1-217ENST00000593168 RSRC2Q7L4I2 434 aaKnown RBP14.04□□□□□ -0.16
VMP1-217ENST00000593168 BNIPLQ7Z465 357 aa14.04□□□□□ -0.16
VMP1-217ENST00000593168 LRRN4CLQ8ND94 238 aa14.04□□□□□ -0.16
VMP1-217ENST00000593168 CMASQ8NFW8 434 aaPredicted RBP14.04□□□□□ -0.16
VMP1-217ENST00000593168 SCAMP5Q8TAC9 235 aa14.04□□□□□ -0.16
VMP1-217ENST00000593168 SUSD6Q92537 303 aa14.04□□□□□ -0.16
VMP1-217ENST00000593168 UBXN4Q92575 508 aa14.04□□□□□ -0.16
VMP1-217ENST00000593168 RBM41Q96IZ5 413 aaKnown RBP14.04□□□□□ -0.16
VMP1-217ENST00000593168 TBCBQ99426 244 aa14.04□□□□□ -0.16
VMP1-217ENST00000593168 CRISPLD1Q9H336 500 aa14.04□□□□□ -0.16
VMP1-217ENST00000593168 NGRNQ9NPE2 291 aaKnown RBP14.04□□□□□ -0.16
VMP1-217ENST00000593168 EHD2Q9NZN4 543 aa14.04□□□□□ -0.16
VMP1-217ENST00000593168 SCML2Q9UQR0 700 aa14.04□□□□□ -0.16
VMP1-217ENST00000593168 ZDBF2Q9HCK1 2354 aa14.04□□□□□ -0.16
VMP1-217ENST00000593168 CAPN9O14815 690 aa14.03□□□□□ -0.16
VMP1-217ENST00000593168 GFRA3O60609 400 aa14.03□□□□□ -0.16
VMP1-217ENST00000593168 IL1R2P27930 398 aa14.03□□□□□ -0.16
VMP1-217ENST00000593168 GPR15P49685 360 aa14.03□□□□□ -0.16
VMP1-217ENST00000593168 HDAC4P56524 1084 aa14.03□□□□□ -0.16
VMP1-217ENST00000593168 ERVFC1P60507 584 aa14.03□□□□□ -0.16
VMP1-217ENST00000593168 UBE3AQ05086 875 aa14.03□□□□□ -0.16
VMP1-217ENST00000593168 CDO1Q16878 200 aa14.03□□□□□ -0.16
VMP1-217ENST00000593168 LONRF2Q1L5Z9 754 aa14.03□□□□□ -0.16
VMP1-217ENST00000593168 SYPL2Q5VXT5 272 aa14.03□□□□□ -0.16
VMP1-217ENST00000593168 MON1AQ86VX9 555 aa14.03□□□□□ -0.16
VMP1-217ENST00000593168 SLC13A5Q86YT5 568 aaPredicted RBP14.03□□□□□ -0.16
VMP1-217ENST00000593168 ARHGAP18Q8N392 663 aa14.03□□□□□ -0.16
VMP1-217ENST00000593168 MMGT1Q8N4V1 131 aa14.03□□□□□ -0.16
VMP1-217ENST00000593168 TTC9BQ8N6N2 239 aa14.03□□□□□ -0.16
VMP1-217ENST00000593168 TEKT4Q8WW24 435 aa14.03□□□□□ -0.16
VMP1-217ENST00000593168 MAIP1Q8WWC4 291 aa14.03□□□□□ -0.16
VMP1-217ENST00000593168 PGAP3Q96FM1 320 aaPredicted RBP14.03□□□□□ -0.16
VMP1-217ENST00000593168 SEPT5Q99719 369 aaPredicted RBP14.03□□□□□ -0.16
VMP1-217ENST00000593168 ABCC13Q9NSE7 274 aa14.03□□□□□ -0.16
VMP1-217ENST00000593168 TMEM51Q9NW97 253 aa14.03□□□□□ -0.16
VMP1-217ENST00000593168 SMARCAL1Q9NZC9 954 aa14.03□□□□□ -0.16
VMP1-217ENST00000593168 PCSK1NQ9UHG2 260 aa14.03□□□□□ -0.16
VMP1-217ENST00000593168 NAALADL1Q9UQQ1 740 aa14.03□□□□□ -0.16
VMP1-217ENST00000593168 IRAK3Q9Y616 596 aa14.03□□□□□ -0.16
VMP1-217ENST00000593168 UQCRHLA0A096LP55 91 aa14.02□□□□□ -0.17
VMP1-217ENST00000593168 CCDC188H7C350 402 aa14.02□□□□□ -0.17
VMP1-217ENST00000593168 FSCN2O14926 492 aa14.02□□□□□ -0.17
VMP1-217ENST00000593168 TEX28O15482 410 aa14.02□□□□□ -0.17
VMP1-217ENST00000593168 F9P00740 461 aa14.02□□□□□ -0.17
VMP1-217ENST00000593168 PDGFBP01127 241 aaPredicted RBP14.02□□□□□ -0.17
VMP1-217ENST00000593168 UQCRHP07919 91 aa14.02□□□□□ -0.17
VMP1-217ENST00000593168 RARAP10276 462 aa14.02□□□□□ -0.17
VMP1-217ENST00000593168 YWHAQP27348 245 aa14.02□□□□□ -0.17
VMP1-217ENST00000593168 AVPR2P30518 371 aa14.02□□□□□ -0.17
VMP1-217ENST00000593168 PTPN7P35236 360 aa14.02□□□□□ -0.17
VMP1-217ENST00000593168 SULT1E1P49888 294 aa14.02□□□□□ -0.17
VMP1-217ENST00000593168 YWHAGP61981 247 aaKnown RBP eCLIP14.02□□□□□ -0.17
VMP1-217ENST00000593168 PPP2R5EQ16537 467 aa14.02□□□□□ -0.17
VMP1-217ENST00000593168 DUSP6Q16828 381 aa14.02□□□□□ -0.17
VMP1-217ENST00000593168 ATP13A4Q4VNC1 1196 aa14.02□□□□□ -0.17
VMP1-217ENST00000593168 ZFYVE27Q5T4F4 411 aa14.02□□□□□ -0.17
VMP1-217ENST00000593168 SDHAF4Q5VUM1 108 aa14.02□□□□□ -0.17
VMP1-217ENST00000593168 TXNRD3NBQ6F5E7 133 aa14.02□□□□□ -0.17
VMP1-217ENST00000593168 AADACL2Q6P093 401 aa14.02□□□□□ -0.17
VMP1-217ENST00000593168 TCEAL8Q8IYN2 117 aa14.02□□□□□ -0.17
VMP1-217ENST00000593168 MICAL1Q8TDZ2 1067 aa14.02□□□□□ -0.17
VMP1-217ENST00000593168 OSBPL8Q9BZF1 889 aa14.02□□□□□ -0.17
VMP1-217ENST00000593168 ZWILCHQ9H900 591 aa14.02□□□□□ -0.17
VMP1-217ENST00000593168 EFR3BQ9Y2G0 817 aa14.02□□□□□ -0.17
VMP1-217ENST00000593168 SLC38A8A6NNN8 435 aa14.01□□□□□ -0.17
VMP1-217ENST00000593168 M0QYT0 321 aa14.01□□□□□ -0.17
VMP1-217ENST00000593168 KRIT1O00522 736 aa14.01□□□□□ -0.17
VMP1-217ENST00000593168 MDM4O15151 490 aa14.01□□□□□ -0.17
VMP1-217ENST00000593168 SEC24AO95486 1093 aa14.01□□□□□ -0.17
VMP1-217ENST00000593168 CXCL14O95715 111 aa14.01□□□□□ -0.17
VMP1-217ENST00000593168 KRT1P04264 644 aa14.01□□□□□ -0.17
VMP1-217ENST00000593168 NCAM1P13591 858 aa14.01□□□□□ -0.17
VMP1-217ENST00000593168 ATF6P18850 670 aa14.01□□□□□ -0.17
VMP1-217ENST00000593168 TFE3P19532 575 aaPredicted RBP14.01□□□□□ -0.17
VMP1-217ENST00000593168 KDELR1P24390 212 aa14.01□□□□□ -0.17
VMP1-217ENST00000593168 ELF1P32519 619 aa14.01□□□□□ -0.17
VMP1-217ENST00000593168 RDXP35241 583 aaKnown RBP14.01□□□□□ -0.17
VMP1-217ENST00000593168 GJC1P36383 396 aa14.01□□□□□ -0.17
VMP1-217ENST00000593168 PSEN1P49768 467 aa14.01□□□□□ -0.17
VMP1-217ENST00000593168 KCNC3Q14003 757 aa14.01□□□□□ -0.17
VMP1-217ENST00000593168 SMC1AQ14683 1233 aaKnown RBP14.01□□□□□ -0.17
VMP1-217ENST00000593168 TAZQ16635 292 aa14.01□□□□□ -0.17
VMP1-217ENST00000593168 RAB6CQ53S08 254 aa14.01□□□□□ -0.17
VMP1-217ENST00000593168 ODF2Q5BJF6 829 aa14.01□□□□□ -0.17
VMP1-217ENST00000593168 OTUD1Q5VV17 481 aaPredicted RBP14.01□□□□□ -0.17
VMP1-217ENST00000593168 BTBD8Q5XKL5 378 aa14.01□□□□□ -0.17
VMP1-217ENST00000593168 SCYL2Q6P3W7 929 aa14.01□□□□□ -0.17
VMP1-217ENST00000593168 SPOCD1Q6ZMY3 1216 aa14.01□□□□□ -0.17
VMP1-217ENST00000593168 CYP4V2Q6ZWL3 525 aaPredicted RBP14.01□□□□□ -0.17
VMP1-217ENST00000593168 TMC7Q7Z402 723 aa14.01□□□□□ -0.17
VMP1-217ENST00000593168 SCD5Q86SK9 330 aa14.01□□□□□ -0.17
VMP1-217ENST00000593168 PSTKQ8IV42 348 aaKnown RBP14.01□□□□□ -0.17
VMP1-217ENST00000593168 NOA1Q8NC60 698 aaKnown RBP14.01□□□□□ -0.17
VMP1-217ENST00000593168 AUTS2Q8WXX7 1259 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms