RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 SLC36A4Q6YBV0 504 aa21.5■■□□□ 1.03
TRIM47-207ENST00000593089 ZNF276Q8N554 614 aa21.5■■□□□ 1.03
TRIM47-207ENST00000593089 TTC39CQ8N584 583 aa21.5■■□□□ 1.03
TRIM47-207ENST00000593089 P2RY11Q96G91 374 aa21.5■■□□□ 1.03
TRIM47-207ENST00000593089 CDK5RAP1Q96SZ6 601 aaKnown RBP21.5■■□□□ 1.03
TRIM47-207ENST00000593089 CACNA2D2Q9NY47 1150 aa21.5■■□□□ 1.03
TRIM47-207ENST00000593089 PILRBQ9UKJ0 227 aa21.5■■□□□ 1.03
TRIM47-207ENST00000593089 CYP8B1Q9UNU6 501 aa21.5■■□□□ 1.03
TRIM47-207ENST00000593089 ADAMTS9Q9P2N4 1935 aa21.49■■□□□ 1.03
TRIM47-207ENST00000593089 PI4KAP42356 2102 aa21.49■■□□□ 1.03
TRIM47-207ENST00000593089 IGHV1OR15-9A0A0B4J2B8 117 aa21.49■■□□□ 1.03
TRIM47-207ENST00000593089 CFIP05156 583 aa21.49■■□□□ 1.03
TRIM47-207ENST00000593089 ENGP17813 658 aa21.49■■□□□ 1.03
TRIM47-207ENST00000593089 MCCD1P59942 119 aaPredicted RBP21.49■■□□□ 1.03
TRIM47-207ENST00000593089 COG7P83436 770 aa21.49■■□□□ 1.03
TRIM47-207ENST00000593089 DCAF17Q5H9S7 520 aaPredicted RBP21.49■■□□□ 1.03
TRIM47-207ENST00000593089 TCERG1LQ5VWI1 586 aa21.49■■□□□ 1.03
TRIM47-207ENST00000593089 SLC23A3Q6PIS1 610 aa21.49■■□□□ 1.03
TRIM47-207ENST00000593089 PIGZQ86VD9 579 aa21.49■■□□□ 1.03
TRIM47-207ENST00000593089 CCDC34Q96HJ3 373 aa21.49■■□□□ 1.03
TRIM47-207ENST00000593089 FAXDC2Q96IV6 333 aa21.49■■□□□ 1.03
TRIM47-207ENST00000593089 GABRG3Q99928 467 aa21.49■■□□□ 1.03
TRIM47-207ENST00000593089 SLC6A17Q9H1V8 727 aa21.49■■□□□ 1.03
TRIM47-207ENST00000593089 CD248Q9HCU0 757 aa21.49■■□□□ 1.03
TRIM47-207ENST00000593089 FSCN3Q9NQT6 498 aa21.49■■□□□ 1.03
TRIM47-207ENST00000593089 ZNF510Q9Y2H8 683 aa21.49■■□□□ 1.03
TRIM47-207ENST00000593089 GON4LQ3T8J9 2241 aa21.48■■□□□ 1.03
TRIM47-207ENST00000593089 WASH3PC4AMC7 463 aa21.48■■□□□ 1.03
TRIM47-207ENST00000593089 ZNF217O75362 1048 aa21.48■■□□□ 1.03
TRIM47-207ENST00000593089 CSRP1P21291 193 aaKnown RBP21.48■■□□□ 1.03
TRIM47-207ENST00000593089 CORO1AP31146 461 aaKnown RBP21.48■■□□□ 1.03
TRIM47-207ENST00000593089 PRCPP42785 496 aa21.48■■□□□ 1.03
TRIM47-207ENST00000593089 ZNF33AQ06730 810 aa21.48■■□□□ 1.03
TRIM47-207ENST00000593089 FOXC1Q12948 553 aa21.48■■□□□ 1.03
TRIM47-207ENST00000593089 PEAR1Q5VY43 1037 aaPredicted RBP21.48■■□□□ 1.03
TRIM47-207ENST00000593089 RSRC2Q7L4I2 434 aaKnown RBP21.48■■□□□ 1.03
TRIM47-207ENST00000593089 DEFB124Q8NES8 71 aa21.48■■□□□ 1.03
TRIM47-207ENST00000593089 DCLK3Q9C098 648 aa21.48■■□□□ 1.03
TRIM47-207ENST00000593089 CD93Q9NPY3 652 aa21.48■■□□□ 1.03
TRIM47-207ENST00000593089 FBXO10Q9UK96 956 aa21.48■■□□□ 1.03
TRIM47-207ENST00000593089 PENKP01210 267 aaPredicted RBP21.47■■□□□ 1.03
TRIM47-207ENST00000593089 CEACAM1P13688 526 aa21.47■■□□□ 1.03
TRIM47-207ENST00000593089 CHKAP35790 457 aa21.47■■□□□ 1.03
TRIM47-207ENST00000593089 TKTL1P51854 596 aa21.47■■□□□ 1.03
TRIM47-207ENST00000593089 SLC8A3P57103 927 aa21.47■■□□□ 1.03
TRIM47-207ENST00000593089 YWHAGP61981 247 aaKnown RBP eCLIP21.47■■□□□ 1.03
TRIM47-207ENST00000593089 GOLGA7BQ2TAP0 167 aa21.47■■□□□ 1.03
TRIM47-207ENST00000593089 CBWD6Q4V339 395 aa21.47■■□□□ 1.03
TRIM47-207ENST00000593089 RAB41Q5JT25 222 aa21.47■■□□□ 1.03
TRIM47-207ENST00000593089 CBWD3Q5JTY5 395 aa21.47■■□□□ 1.03
TRIM47-207ENST00000593089 CBWD5Q5RIA9 395 aa21.47■■□□□ 1.03
TRIM47-207ENST00000593089 FYB2Q5VWT5 728 aa21.47■■□□□ 1.03
TRIM47-207ENST00000593089 ARHGAP17Q68EM7 881 aa21.47■■□□□ 1.03
TRIM47-207ENST00000593089 DENND1CQ8IV53 801 aa21.47■■□□□ 1.03
TRIM47-207ENST00000593089 ARHGAP18Q8N392 663 aa21.47■■□□□ 1.03
TRIM47-207ENST00000593089 ANKRD52Q8NB46 1076 aa21.47■■□□□ 1.03
TRIM47-207ENST00000593089 TSG101Q99816 390 aa21.47■■□□□ 1.03
TRIM47-207ENST00000593089 UBXN6Q9BZV1 441 aa21.47■■□□□ 1.03
TRIM47-207ENST00000593089 RMND1Q9NWS8 449 aa21.47■■□□□ 1.03
TRIM47-207ENST00000593089 SLC6A14Q9UN76 642 aa21.47■■□□□ 1.03
TRIM47-207ENST00000593089 ASCC3Q8N3C0 2202 aaKnown RBP21.46■■□□□ 1.03
TRIM47-207ENST00000593089 SLC12A8A0AV02 714 aa21.46■■□□□ 1.03
TRIM47-207ENST00000593089 GFRA2O00451 464 aa21.46■■□□□ 1.03
TRIM47-207ENST00000593089 DUOXA1Q1HG43 343 aa21.46■■□□□ 1.03
TRIM47-207ENST00000593089 KIAA1324Q6UXG2 1013 aaKnown RBP21.46■■□□□ 1.03
TRIM47-207ENST00000593089 SLC41A1Q8IVJ1 513 aa21.46■■□□□ 1.03
TRIM47-207ENST00000593089 CEP76Q8TAP6 659 aa21.46■■□□□ 1.03
TRIM47-207ENST00000593089 MRGPRX1Q96LB2 322 aa21.46■■□□□ 1.03
TRIM47-207ENST00000593089 GTPBP2Q9BX10 602 aaKnown RBP21.46■■□□□ 1.03
TRIM47-207ENST00000593089 MARCH2Q9P0N8 246 aa21.46■■□□□ 1.03
TRIM47-207ENST00000593089 AGO1Q9UL18 857 aaKnown RBP21.46■■□□□ 1.03
TRIM47-207ENST00000593089 STRIP2Q9ULQ0 834 aa21.46■■□□□ 1.03
TRIM47-207ENST00000593089 STON1Q9Y6Q2 735 aa21.46■■□□□ 1.03
TRIM47-207ENST00000593089 TULP2O00295 520 aa21.45■■□□□ 1.02
TRIM47-207ENST00000593089 HOXD12P35452 270 aa21.45■■□□□ 1.02
TRIM47-207ENST00000593089 ATXN3P54252 364 aaPredicted RBP21.45■■□□□ 1.02
TRIM47-207ENST00000593089 MFAP3P55082 362 aa21.45■■□□□ 1.02
TRIM47-207ENST00000593089 GEN1Q17RS7 908 aa21.45■■□□□ 1.02
TRIM47-207ENST00000593089 ZNF658Q5TYW1 1059 aaPredicted RBP21.45■■□□□ 1.02
TRIM47-207ENST00000593089 FMR1NBQ8N0W7 255 aaPredicted RBP21.45■■□□□ 1.02
TRIM47-207ENST00000593089 TRIML1Q8N9V2 468 aa21.45■■□□□ 1.02
TRIM47-207ENST00000593089 NDRG1Q92597 394 aaKnown RBP21.45■■□□□ 1.02
TRIM47-207ENST00000593089 HSPA12BQ96MM6 686 aa21.45■■□□□ 1.02
TRIM47-207ENST00000593089 ULBP1Q9BZM6 244 aa21.45■■□□□ 1.02
TRIM47-207ENST00000593089 FAM124BQ9H5Z6 455 aaPredicted RBP21.45■■□□□ 1.02
TRIM47-207ENST00000593089 TSPAN16Q9UKR8 245 aa21.45■■□□□ 1.02
TRIM47-207ENST00000593089 SLC27A6Q9Y2P4 619 aa21.45■■□□□ 1.02
TRIM47-207ENST00000593089 SLC16A3O15427 465 aaKnown RBP21.44■■□□□ 1.02
TRIM47-207ENST00000593089 NDUFS2O75306 463 aa21.44■■□□□ 1.02
TRIM47-207ENST00000593089 ZBED1O96006 694 aa21.44■■□□□ 1.02
TRIM47-207ENST00000593089 CYBBP04839 570 aa21.44■■□□□ 1.02
TRIM47-207ENST00000593089 SERPINF2P08697 491 aa21.44■■□□□ 1.02
TRIM47-207ENST00000593089 SPINK2P20155 84 aa21.44■■□□□ 1.02
TRIM47-207ENST00000593089 PMS1P54277 932 aaKnown RBP21.44■■□□□ 1.02
TRIM47-207ENST00000593089 GFPT1Q06210 699 aaPredicted RBP21.44■■□□□ 1.02
TRIM47-207ENST00000593089 PDE4CQ08493 712 aa21.44■■□□□ 1.02
TRIM47-207ENST00000593089 CUL2Q13617 745 aa21.44■■□□□ 1.02
TRIM47-207ENST00000593089 STARD3Q14849 445 aa21.44■■□□□ 1.02
TRIM47-207ENST00000593089 ANKRD40Q6AI12 368 aa21.44■■□□□ 1.02
TRIM47-207ENST00000593089 ERCC4Q92889 916 aaPredicted RBP21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms