RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 CLIC5Q9NZA1 410 aa18.59■□□□□ 0.57
SPC24-206ENST00000592540 CASQ2O14958 399 aaPredicted RBP18.58■□□□□ 0.57
SPC24-206ENST00000592540 MED7O43513 233 aa18.58■□□□□ 0.57
SPC24-206ENST00000592540 ATP9BO43861 1147 aa18.58■□□□□ 0.57
SPC24-206ENST00000592540 FAM189A1O60320 539 aa18.58■□□□□ 0.57
SPC24-206ENST00000592540 FGF3P11487 239 aaPredicted RBP18.58■□□□□ 0.57
SPC24-206ENST00000592540 RBL1P28749 1068 aa18.58■□□□□ 0.57
SPC24-206ENST00000592540 GABRB2P47870 512 aa18.58■□□□□ 0.57
SPC24-206ENST00000592540 FOLH1Q04609 750 aa18.58■□□□□ 0.57
SPC24-206ENST00000592540 R3HDM1Q15032 1099 aaKnown RBP18.58■□□□□ 0.57
SPC24-206ENST00000592540 DUOXA2Q1HG44 320 aa18.58■□□□□ 0.57
SPC24-206ENST00000592540 C16orf46Q6P387 395 aa18.58■□□□□ 0.57
SPC24-206ENST00000592540 TIFABQ6ZNK6 161 aa18.58■□□□□ 0.57
SPC24-206ENST00000592540 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.58■□□□□ 0.57
SPC24-206ENST00000592540 ITFG2Q969R8 447 aa18.58■□□□□ 0.57
SPC24-206ENST00000592540 BTBD9Q96Q07 612 aa18.58■□□□□ 0.57
SPC24-206ENST00000592540 SHCBP1LQ9BZQ2 653 aa18.58■□□□□ 0.57
SPC24-206ENST00000592540 KDM4FA0A1W2PPD8 638 aa18.58■□□□□ 0.56
SPC24-206ENST00000592540 PEX1O43933 1283 aa18.58■□□□□ 0.56
SPC24-206ENST00000592540 RPL10AP62906 217 aaKnown RBP18.58■□□□□ 0.56
SPC24-206ENST00000592540 STXBP5Q5T5C0 1151 aa18.58■□□□□ 0.56
SPC24-206ENST00000592540 SH3PXD2AQ5TCZ1 1133 aa18.58■□□□□ 0.56
SPC24-206ENST00000592540 CYP4V2Q6ZWL3 525 aaPredicted RBP18.58■□□□□ 0.56
SPC24-206ENST00000592540 MAVSQ7Z434 540 aa18.58■□□□□ 0.56
SPC24-206ENST00000592540 PLD5Q8N7P1 536 aa18.58■□□□□ 0.56
SPC24-206ENST00000592540 ICA1LQ8NDH6 482 aa18.58■□□□□ 0.56
SPC24-206ENST00000592540 SIGLEC10Q96LC7 697 aa18.58■□□□□ 0.56
SPC24-206ENST00000592540 RNF157Q96PX1 679 aa18.58■□□□□ 0.56
SPC24-206ENST00000592540 TMEM134Q9H6X4 195 aa18.58■□□□□ 0.56
SPC24-206ENST00000592540 EMCNQ9ULC0 261 aa18.58■□□□□ 0.56
SPC24-206ENST00000592540 RIPK3Q9Y572 518 aa18.58■□□□□ 0.56
SPC24-206ENST00000592540 MGAMO43451 1857 aa18.58■□□□□ 0.56
SPC24-206ENST00000592540 C15orf38-AP3S2A0A0A6YYH1 394 aa18.57■□□□□ 0.56
SPC24-206ENST00000592540 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.57■□□□□ 0.56
SPC24-206ENST00000592540 IRF6O14896 467 aa18.57■□□□□ 0.56
SPC24-206ENST00000592540 PGM3O95394 542 aa18.57■□□□□ 0.56
SPC24-206ENST00000592540 ASLP04424 464 aa18.57■□□□□ 0.56
SPC24-206ENST00000592540 SUPT20HL2P0C7V6 817 aa18.57■□□□□ 0.56
SPC24-206ENST00000592540 SMIM18P0DKX4 95 aa18.57■□□□□ 0.56
SPC24-206ENST00000592540 ITGAXP20702 1163 aa18.57■□□□□ 0.56
SPC24-206ENST00000592540 ITGA9Q13797 1035 aa18.57■□□□□ 0.56
SPC24-206ENST00000592540 SUPT20HL1Q3ZLR7 823 aa18.57■□□□□ 0.56
SPC24-206ENST00000592540 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.57■□□□□ 0.56
SPC24-206ENST00000592540 RAB6CQ53S08 254 aa18.57■□□□□ 0.56
SPC24-206ENST00000592540 TCHHL1Q5QJ38 904 aaPredicted RBP18.57■□□□□ 0.56
SPC24-206ENST00000592540 ARPINQ7Z6K5 226 aa18.57■□□□□ 0.56
SPC24-206ENST00000592540 RSPH3Q86UC2 560 aa18.57■□□□□ 0.56
SPC24-206ENST00000592540 HPS6Q86YV9 775 aa18.57■□□□□ 0.56
SPC24-206ENST00000592540 DEFB107AQ8IZN7 70 aa18.57■□□□□ 0.56
SPC24-206ENST00000592540 MPP5Q8N3R9 675 aa18.57■□□□□ 0.56
SPC24-206ENST00000592540 MCUQ8NE86 351 aa18.57■□□□□ 0.56
SPC24-206ENST00000592540 DEPDC1BQ8WUY9 529 aa18.57■□□□□ 0.56
SPC24-206ENST00000592540 MCRS1Q96EZ8 462 aa18.57■□□□□ 0.56
SPC24-206ENST00000592540 MPP4Q96JB8 637 aa18.57■□□□□ 0.56
SPC24-206ENST00000592540 NLRP4Q96MN2 994 aa18.57■□□□□ 0.56
SPC24-206ENST00000592540 EBNA1BP2Q99848 306 aaKnown RBP18.57■□□□□ 0.56
SPC24-206ENST00000592540 RAB6CQ9H0N0 254 aa18.57■□□□□ 0.56
SPC24-206ENST00000592540 XYLT2Q9H1B5 865 aa18.57■□□□□ 0.56
SPC24-206ENST00000592540 PSME4Q14997 1843 aa18.57■□□□□ 0.56
SPC24-206ENST00000592540 H3BNX3 289 aa18.57■□□□□ 0.56
SPC24-206ENST00000592540 ZBED1O96006 694 aa18.57■□□□□ 0.56
SPC24-206ENST00000592540 MAGEA3P43357 314 aa18.57■□□□□ 0.56
SPC24-206ENST00000592540 RAP1GAPP47736 663 aa18.57■□□□□ 0.56
SPC24-206ENST00000592540 IDH3AP50213 366 aa18.57■□□□□ 0.56
SPC24-206ENST00000592540 TTLL12Q14166 644 aaPredicted RBP18.57■□□□□ 0.56
SPC24-206ENST00000592540 LCA5Q86VQ0 697 aa18.57■□□□□ 0.56
SPC24-206ENST00000592540 RTKN2Q8IZC4 609 aa18.57■□□□□ 0.56
SPC24-206ENST00000592540 DGCR14Q96DF8 476 aaKnown RBP18.57■□□□□ 0.56
SPC24-206ENST00000592540 CMTM5Q96DZ9 223 aa18.57■□□□□ 0.56
SPC24-206ENST00000592540 TCHPQ9BT92 498 aa18.57■□□□□ 0.56
SPC24-206ENST00000592540 NRDE2Q9H7Z3 1164 aa18.57■□□□□ 0.56
SPC24-206ENST00000592540 RNF146Q9NTX7 359 aa18.57■□□□□ 0.56
SPC24-206ENST00000592540 NXF1Q9UBU9 619 aaKnown RBP18.57■□□□□ 0.56
SPC24-206ENST00000592540 SSX2IPQ9Y2D8 614 aa18.57■□□□□ 0.56
SPC24-206ENST00000592540 HEY1Q9Y5J3 304 aa18.57■□□□□ 0.56
SPC24-206ENST00000592540 MMP10P09238 476 aa18.56■□□□□ 0.56
SPC24-206ENST00000592540 KCNA4P22459 653 aa18.56■□□□□ 0.56
SPC24-206ENST00000592540 RGS2P41220 211 aa18.56■□□□□ 0.56
SPC24-206ENST00000592540 TFAMQ00059 246 aaKnown RBP18.56■□□□□ 0.56
SPC24-206ENST00000592540 GRAMD1BQ3KR37 738 aa18.56■□□□□ 0.56
SPC24-206ENST00000592540 N4BP2L1Q5TBK1 243 aaPredicted RBP18.56■□□□□ 0.56
SPC24-206ENST00000592540 KBTBD6Q86V97 674 aa18.56■□□□□ 0.56
SPC24-206ENST00000592540 FBXW8Q8N3Y1 598 aa18.56■□□□□ 0.56
SPC24-206ENST00000592540 EFCAB3Q8N7B9 438 aa18.56■□□□□ 0.56
SPC24-206ENST00000592540 SLC7A3Q8WY07 619 aa18.56■□□□□ 0.56
SPC24-206ENST00000592540 FAM210AQ96ND0 272 aa18.56■□□□□ 0.56
SPC24-206ENST00000592540 ADPGKQ9BRR6 497 aa18.56■□□□□ 0.56
SPC24-206ENST00000592540 PNPOQ9NVS9 261 aa18.56■□□□□ 0.56
SPC24-206ENST00000592540 DNAJC28Q9NX36 388 aa18.56■□□□□ 0.56
SPC24-206ENST00000592540 STK10O94804 968 aaKnown RBP18.56■□□□□ 0.56
SPC24-206ENST00000592540 OATP04181 439 aa18.56■□□□□ 0.56
SPC24-206ENST00000592540 ZNF143P52747 638 aaPredicted RBP18.56■□□□□ 0.56
SPC24-206ENST00000592540 ORC1Q13415 861 aa18.56■□□□□ 0.56
SPC24-206ENST00000592540 CAPSQ13938 189 aa18.56■□□□□ 0.56
SPC24-206ENST00000592540 OGFRL1Q5TC84 451 aaPredicted RBP18.56■□□□□ 0.56
SPC24-206ENST00000592540 PDPK2PQ6A1A2 396 aa18.56■□□□□ 0.56
SPC24-206ENST00000592540 ZPBP2Q6X784 338 aa18.56■□□□□ 0.56
SPC24-206ENST00000592540 ATG14Q6ZNE5 492 aa18.56■□□□□ 0.56
SPC24-206ENST00000592540 ZNF534Q76KX8 674 aa18.56■□□□□ 0.56
SPC24-206ENST00000592540 TMC7Q7Z402 723 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms