RNA–Protein interactions for RNA: ENST00000592158.1

SMARCA4-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 409 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-218ENST00000592158 IGHV4-34P06331 123 aa9.41□□□□□ -0.9
SMARCA4-218ENST00000592158 FECHP22830 423 aa9.41□□□□□ -0.9
SMARCA4-218ENST00000592158 GLRA2P23416 452 aa9.41□□□□□ -0.9
SMARCA4-218ENST00000592158 PTGER4P35408 488 aa9.41□□□□□ -0.9
SMARCA4-218ENST00000592158 UGT1A5P35504 534 aa9.41□□□□□ -0.9
SMARCA4-218ENST00000592158 ANO4Q32M45 955 aa9.41□□□□□ -0.9
SMARCA4-218ENST00000592158 DCAF4L1Q3SXM0 396 aa9.41□□□□□ -0.9
SMARCA4-218ENST00000592158 XKR4Q5GH76 650 aa9.41□□□□□ -0.9
SMARCA4-218ENST00000592158 SDHAF4Q5VUM1 108 aa9.41□□□□□ -0.9
SMARCA4-218ENST00000592158 B3GNT9Q6UX72 402 aa9.41□□□□□ -0.9
SMARCA4-218ENST00000592158 ALKAL1Q6UXT8 129 aa9.41□□□□□ -0.9
SMARCA4-218ENST00000592158 RUFY3Q7L099 469 aa9.41□□□□□ -0.9
SMARCA4-218ENST00000592158 DTX1Q86Y01 620 aa9.41□□□□□ -0.9
SMARCA4-218ENST00000592158 SLC25A45Q8N413 288 aa9.41□□□□□ -0.9
SMARCA4-218ENST00000592158 OR10T2Q8NGX3 314 aa9.41□□□□□ -0.9
SMARCA4-218ENST00000592158 APOLD1Q96LR9 279 aa9.41□□□□□ -0.9
SMARCA4-218ENST00000592158 SLKQ9H2G2 1235 aaPredicted RBP9.41□□□□□ -0.9
SMARCA4-218ENST00000592158 SEMA6CQ9H3T2 930 aa9.41□□□□□ -0.9
SMARCA4-218ENST00000592158 DNAJC17Q9NVM6 304 aaKnown RBP9.41□□□□□ -0.9
SMARCA4-218ENST00000592158 ABI2Q9NYB9 513 aaPredicted RBP9.41□□□□□ -0.9
SMARCA4-218ENST00000592158 KCNJ14Q9UNX9 436 aa9.41□□□□□ -0.9
SMARCA4-218ENST00000592158 CITO14578 2027 aa9.41□□□□□ -0.9
SMARCA4-218ENST00000592158 WNT9AO14904 365 aa9.4□□□□□ -0.9
SMARCA4-218ENST00000592158 NVLO15381 856 aaKnown RBP9.4□□□□□ -0.9
SMARCA4-218ENST00000592158 FFAR2O15552 330 aa9.4□□□□□ -0.9
SMARCA4-218ENST00000592158 PRICKLE3O43900 615 aaPredicted RBP9.4□□□□□ -0.9
SMARCA4-218ENST00000592158 CNTN5O94779 1100 aa9.4□□□□□ -0.9
SMARCA4-218ENST00000592158 PDE6CP51160 858 aa9.4□□□□□ -0.9
SMARCA4-218ENST00000592158 ZNF132P52740 706 aa9.4□□□□□ -0.9
SMARCA4-218ENST00000592158 YARSP54577 528 aaKnown RBP9.4□□□□□ -0.9
SMARCA4-218ENST00000592158 EVCP57679 992 aa9.4□□□□□ -0.9
SMARCA4-218ENST00000592158 PRPF4BQ13523 1007 aaKnown RBP9.4□□□□□ -0.9
SMARCA4-218ENST00000592158 NPY5RQ15761 445 aa9.4□□□□□ -0.9
SMARCA4-218ENST00000592158 FAM187BQ17R55 369 aa9.4□□□□□ -0.9
SMARCA4-218ENST00000592158 XKR9Q5GH70 373 aa9.4□□□□□ -0.9
SMARCA4-218ENST00000592158 KIAA0895LQ68EN5 471 aa9.4□□□□□ -0.9
SMARCA4-218ENST00000592158 CPLX2Q6PUV4 134 aaKnown RBP9.4□□□□□ -0.9
SMARCA4-218ENST00000592158 MOXD1Q6UVY6 613 aa9.4□□□□□ -0.9
SMARCA4-218ENST00000592158 DSTYKQ6XUX3 929 aa9.4□□□□□ -0.9
SMARCA4-218ENST00000592158 TMPRSS9Q7Z410 1059 aa9.4□□□□□ -0.9
SMARCA4-218ENST00000592158 SPPL2BQ8TCT7 592 aa9.4□□□□□ -0.9
SMARCA4-218ENST00000592158 TRIM9Q9C026 710 aa9.4□□□□□ -0.9
SMARCA4-218ENST00000592158 CYLDQ9NQC7 956 aa9.4□□□□□ -0.9
SMARCA4-218ENST00000592158 SMPD4Q9NXE4 827 aa9.4□□□□□ -0.9
SMARCA4-218ENST00000592158 WRAP73Q9P2S5 460 aaPredicted RBP9.4□□□□□ -0.9
SMARCA4-218ENST00000592158 KCND3Q9UK17 655 aa9.4□□□□□ -0.9
SMARCA4-218ENST00000592158 VAV3Q9UKW4 847 aa9.4□□□□□ -0.9
SMARCA4-218ENST00000592158 CYP46A1Q9Y6A2 500 aa9.4□□□□□ -0.9
SMARCA4-218ENST00000592158 NOTCH1P46531 2555 aa9.4□□□□□ -0.9
SMARCA4-218ENST00000592158 LY6G6EA0A0G2JKS1 128 aa9.39□□□□□ -0.91
SMARCA4-218ENST00000592158 LRRIQ4A6NIV6 560 aa9.39□□□□□ -0.91
SMARCA4-218ENST00000592158 JAK2O60674 1132 aa9.39□□□□□ -0.91
SMARCA4-218ENST00000592158 DTNBO60941 627 aa9.39□□□□□ -0.91
SMARCA4-218ENST00000592158 HGFP14210 728 aa9.39□□□□□ -0.91
SMARCA4-218ENST00000592158 CLCN1P35523 988 aa9.39□□□□□ -0.91
SMARCA4-218ENST00000592158 ARL2P36404 184 aa9.39□□□□□ -0.91
SMARCA4-218ENST00000592158 SEPT6Q14141 434 aa9.39□□□□□ -0.91
SMARCA4-218ENST00000592158 DHX8Q14562 1220 aaKnown RBP9.39□□□□□ -0.91
SMARCA4-218ENST00000592158 NCAPH2Q6IBW4 605 aa9.39□□□□□ -0.91
SMARCA4-218ENST00000592158 GALNT17Q6IS24 598 aa9.39□□□□□ -0.91
SMARCA4-218ENST00000592158 ASB18Q6ZVZ8 466 aa9.39□□□□□ -0.91
SMARCA4-218ENST00000592158 RAB11FIP2Q7L804 512 aa9.39□□□□□ -0.91
SMARCA4-218ENST00000592158 SPATS2Q86XZ4 545 aaKnown RBP9.39□□□□□ -0.91
SMARCA4-218ENST00000592158 CEP120Q8N960 986 aa9.39□□□□□ -0.91
SMARCA4-218ENST00000592158 FSIP1Q8NA03 581 aa9.39□□□□□ -0.91
SMARCA4-218ENST00000592158 C2orf15Q8WU43 125 aaKnown RBP9.39□□□□□ -0.91
SMARCA4-218ENST00000592158 JPH3Q8WXH2 748 aaPredicted RBP9.39□□□□□ -0.91
SMARCA4-218ENST00000592158 ZNF274Q96GC6 653 aaPredicted RBP9.39□□□□□ -0.91
SMARCA4-218ENST00000592158 TRMT2BQ96GJ1 504 aaKnown RBP9.39□□□□□ -0.91
SMARCA4-218ENST00000592158 MYRFLQ96LU7 910 aa9.39□□□□□ -0.91
SMARCA4-218ENST00000592158 DRC1Q96MC2 740 aa9.39□□□□□ -0.91
SMARCA4-218ENST00000592158 LXNQ9BS40 222 aa9.39□□□□□ -0.91
SMARCA4-218ENST00000592158 SLC29A3Q9BZD2 475 aa9.39□□□□□ -0.91
SMARCA4-218ENST00000592158 ZCWPW1Q9H0M4 648 aa9.39□□□□□ -0.91
SMARCA4-218ENST00000592158 LHX5Q9H2C1 402 aa9.39□□□□□ -0.91
SMARCA4-218ENST00000592158 EBF2Q9HAK2 575 aa9.39□□□□□ -0.91
SMARCA4-218ENST00000592158 TOPORSQ9NS56 1045 aaPredicted RBP9.39□□□□□ -0.91
SMARCA4-218ENST00000592158 EVA1BQ9NVM1 165 aa9.39□□□□□ -0.91
SMARCA4-218ENST00000592158 CFAP97Q9P2B7 532 aa9.39□□□□□ -0.91
SMARCA4-218ENST00000592158 TBC1D14Q9P2M4 693 aa9.39□□□□□ -0.91
SMARCA4-218ENST00000592158 CPQQ9Y646 472 aa9.39□□□□□ -0.91
SMARCA4-218ENST00000592158 U3KQA8 63 aa9.39□□□□□ -0.91
SMARCA4-218ENST00000592158 CCNT1O60563 726 aaKnown RBP9.38□□□□□ -0.91
SMARCA4-218ENST00000592158 DKC1O60832 514 aaKnown RBP eCLIP9.38□□□□□ -0.91
SMARCA4-218ENST00000592158 TCEA3O75764 348 aa9.38□□□□□ -0.91
SMARCA4-218ENST00000592158 NOL4O94818 638 aa9.38□□□□□ -0.91
SMARCA4-218ENST00000592158 KCNE1P15382 129 aa9.38□□□□□ -0.91
SMARCA4-218ENST00000592158 TYMPP19971 482 aa9.38□□□□□ -0.91
SMARCA4-218ENST00000592158 PDX1P52945 283 aa9.38□□□□□ -0.91
SMARCA4-218ENST00000592158 KRTAP10-9P60411 292 aa9.38□□□□□ -0.91
SMARCA4-218ENST00000592158 PPP2R5CQ13362 524 aa9.38□□□□□ -0.91
SMARCA4-218ENST00000592158 C14orf28Q4W4Y0 310 aa9.38□□□□□ -0.91
SMARCA4-218ENST00000592158 TCTN3Q6NUS6 607 aa9.38□□□□□ -0.91
SMARCA4-218ENST00000592158 CRTC1Q6UUV9 634 aa9.38□□□□□ -0.91
SMARCA4-218ENST00000592158 PIK3AP1Q6ZUJ8 805 aa9.38□□□□□ -0.91
SMARCA4-218ENST00000592158 NEK8Q86SG6 692 aa9.38□□□□□ -0.91
SMARCA4-218ENST00000592158 TMEM25Q86YD3 366 aa9.38□□□□□ -0.91
SMARCA4-218ENST00000592158 TMEM130Q8N3G9 435 aa9.38□□□□□ -0.91
SMARCA4-218ENST00000592158 APOBEC4Q8WW27 367 aaKnown RBP9.38□□□□□ -0.91
SMARCA4-218ENST00000592158 HDAC11Q96DB2 347 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms