RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 CPNE8Q86YQ8 564 aa8.22□□□□□ -1.09
VMP1-213ENST00000591877 RNF168Q8IYW5 571 aaPredicted RBP8.22□□□□□ -1.09
VMP1-213ENST00000591877 CISD2Q8N5K1 135 aaKnown RBP8.22□□□□□ -1.09
VMP1-213ENST00000591877 CLRN3Q8NCR9 226 aa8.22□□□□□ -1.09
VMP1-213ENST00000591877 MCPH1Q8NEM0 835 aa8.22□□□□□ -1.09
VMP1-213ENST00000591877 ERMNQ8TAM6 284 aa8.22□□□□□ -1.09
VMP1-213ENST00000591877 URGCPQ8TCY9 931 aa8.22□□□□□ -1.09
VMP1-213ENST00000591877 SLC22A17Q8WUG5 538 aa8.22□□□□□ -1.09
VMP1-213ENST00000591877 CCDC43Q96MW1 224 aaKnown RBP8.22□□□□□ -1.09
VMP1-213ENST00000591877 PHF7Q9BWX1 381 aaPredicted RBP8.22□□□□□ -1.09
VMP1-213ENST00000591877 RHOBTB2Q9BYZ6 727 aa8.22□□□□□ -1.09
VMP1-213ENST00000591877 CXCL16Q9H2A7 254 aa8.22□□□□□ -1.09
VMP1-213ENST00000591877 BHMT2Q9H2M3 363 aa8.22□□□□□ -1.09
VMP1-213ENST00000591877 PDZD7Q9H5P4 517 aa8.22□□□□□ -1.09
VMP1-213ENST00000591877 UBN1Q9NPG3 1134 aa8.22□□□□□ -1.09
VMP1-213ENST00000591877 DDX19AQ9NUU7 478 aaKnown RBP8.22□□□□□ -1.09
VMP1-213ENST00000591877 LRWD1Q9UFC0 647 aa8.22□□□□□ -1.09
VMP1-213ENST00000591877 MUTYHQ9UIF7 546 aa8.22□□□□□ -1.09
VMP1-213ENST00000591877 VWA8A3KMH1 1905 aa8.21□□□□□ -1.09
VMP1-213ENST00000591877 ZNF318Q5VUA4 2279 aa8.21□□□□□ -1.1
VMP1-213ENST00000591877 SLC12A8A0AV02 714 aa8.21□□□□□ -1.1
VMP1-213ENST00000591877 KRT1P04264 644 aa8.21□□□□□ -1.1
VMP1-213ENST00000591877 ALDH2P05091 517 aa8.21□□□□□ -1.1
VMP1-213ENST00000591877 KRT18P05783 430 aaKnown RBP8.21□□□□□ -1.1
VMP1-213ENST00000591877 INHBBP09529 407 aa8.21□□□□□ -1.1
VMP1-213ENST00000591877 HOXB8P17481 243 aaPredicted RBP8.21□□□□□ -1.1
VMP1-213ENST00000591877 CA8P35219 290 aa8.21□□□□□ -1.1
VMP1-213ENST00000591877 BCL6P41182 706 aa8.21□□□□□ -1.1
VMP1-213ENST00000591877 PRPHP41219 470 aa8.21□□□□□ -1.1
VMP1-213ENST00000591877 NAMPTP43490 491 aa8.21□□□□□ -1.1
VMP1-213ENST00000591877 OR1G1P47890 313 aa8.21□□□□□ -1.1
VMP1-213ENST00000591877 NCBP1Q09161 790 aaKnown RBP8.21□□□□□ -1.1
VMP1-213ENST00000591877 MAPK7Q13164 816 aa8.21□□□□□ -1.1
VMP1-213ENST00000591877 PTPN21Q16825 1174 aa8.21□□□□□ -1.1
VMP1-213ENST00000591877 HERC4Q5GLZ8 1057 aaPredicted RBP8.21□□□□□ -1.1
VMP1-213ENST00000591877 HAUS3Q68CZ6 603 aa8.21□□□□□ -1.1
VMP1-213ENST00000591877 KRTAP5-3Q6L8H2 238 aa8.21□□□□□ -1.1
VMP1-213ENST00000591877 DAW1Q8N136 415 aa8.21□□□□□ -1.1
VMP1-213ENST00000591877 C12orf76Q8N812 135 aaPredicted RBP8.21□□□□□ -1.1
VMP1-213ENST00000591877 TTC8Q8TAM2 541 aa8.21□□□□□ -1.1
VMP1-213ENST00000591877 CASP10Q92851 521 aa8.21□□□□□ -1.1
VMP1-213ENST00000591877 CHAMP1Q96JM3 812 aa8.21□□□□□ -1.1
VMP1-213ENST00000591877 RPGRIP1Q96KN7 1286 aa8.21□□□□□ -1.1
VMP1-213ENST00000591877 KLHL5Q96PQ7 755 aa8.21□□□□□ -1.1
VMP1-213ENST00000591877 KIFC3Q9BVG8 833 aa8.21□□□□□ -1.1
VMP1-213ENST00000591877 APOL6Q9BWW8 343 aa8.21□□□□□ -1.1
VMP1-213ENST00000591877 PRMT7Q9NVM4 692 aaPredicted RBP8.21□□□□□ -1.1
VMP1-213ENST00000591877 PPARGC1AQ9UBK2 798 aaKnown RBP8.21□□□□□ -1.1
VMP1-213ENST00000591877 CACNG4Q9UBN1 327 aa8.21□□□□□ -1.1
VMP1-213ENST00000591877 TNFRSF10DQ9UBN6 386 aa8.21□□□□□ -1.1
VMP1-213ENST00000591877 CTNND2Q9UQB3 1225 aa8.21□□□□□ -1.1
VMP1-213ENST00000591877 GIT1Q9Y2X7 761 aa8.21□□□□□ -1.1
VMP1-213ENST00000591877 PRG3Q9Y2Y8 225 aaPredicted RBP8.21□□□□□ -1.1
VMP1-213ENST00000591877 SPO11Q9Y5K1 396 aa8.21□□□□□ -1.1
VMP1-213ENST00000591877 PDCD11Q14690 1871 aaKnown RBP8.2□□□□□ -1.1
VMP1-213ENST00000591877 LAD1O00515 517 aa8.2□□□□□ -1.1
VMP1-213ENST00000591877 ACKR2O00590 384 aa8.2□□□□□ -1.1
VMP1-213ENST00000591877 PTGESO14684 152 aa8.2□□□□□ -1.1
VMP1-213ENST00000591877 TPD52L2O43399 206 aaKnown RBP8.2□□□□□ -1.1
VMP1-213ENST00000591877 PRKCBP05771 671 aa8.2□□□□□ -1.1
VMP1-213ENST00000591877 CNPP09543 421 aaKnown RBP8.2□□□□□ -1.1
VMP1-213ENST00000591877 WEE2P0C1S8 567 aa8.2□□□□□ -1.1
VMP1-213ENST00000591877 CLCN4P51793 760 aa8.2□□□□□ -1.1
VMP1-213ENST00000591877 CORO7P57737 925 aa8.2□□□□□ -1.1
VMP1-213ENST00000591877 ATP2C1P98194 919 aaPredicted RBP8.2□□□□□ -1.1
VMP1-213ENST00000591877 EGR3Q06889 387 aa8.2□□□□□ -1.1
VMP1-213ENST00000591877 NAB2Q15742 525 aa8.2□□□□□ -1.1
VMP1-213ENST00000591877 GFOD2Q3B7J2 385 aa8.2□□□□□ -1.1
VMP1-213ENST00000591877 RILPL1Q5EBL4 403 aa8.2□□□□□ -1.1
VMP1-213ENST00000591877 HYIQ5T013 277 aa8.2□□□□□ -1.1
VMP1-213ENST00000591877 NT5DC1Q5TFE4 455 aa8.2□□□□□ -1.1
VMP1-213ENST00000591877 RINT1Q6NUQ1 792 aa8.2□□□□□ -1.1
VMP1-213ENST00000591877 ZBTB8OSQ8IWT0 167 aa8.2□□□□□ -1.1
VMP1-213ENST00000591877 JPH3Q8WXH2 748 aaPredicted RBP8.2□□□□□ -1.1
VMP1-213ENST00000591877 RABGGTAQ92696 567 aa8.2□□□□□ -1.1
VMP1-213ENST00000591877 FUBP3Q96I24 572 aaKnown RBP eCLIP8.2□□□□□ -1.1
VMP1-213ENST00000591877 FAM193BQ96PV7 902 aaPredicted RBP8.2□□□□□ -1.1
VMP1-213ENST00000591877 PAAF1Q9BRP4 392 aa8.2□□□□□ -1.1
VMP1-213ENST00000591877 HERC2P3Q9BVR0 1158 aa8.2□□□□□ -1.1
VMP1-213ENST00000591877 TRIM6Q9C030 488 aaPredicted RBP8.2□□□□□ -1.1
VMP1-213ENST00000591877 ADAM7Q9H2U9 754 aa8.2□□□□□ -1.1
VMP1-213ENST00000591877 EPB41L1Q9H4G0 881 aa8.2□□□□□ -1.1
VMP1-213ENST00000591877 POMKQ9H5K3 350 aa8.2□□□□□ -1.1
VMP1-213ENST00000591877 FBXL7Q9UJT9 491 aa8.2□□□□□ -1.1
VMP1-213ENST00000591877 X6R8D5 127 aa8.2□□□□□ -1.1
VMP1-213ENST00000591877 CITO14578 2027 aa8.2□□□□□ -1.1
VMP1-213ENST00000591877 ZMYM2Q9UBW7 1377 aa8.2□□□□□ -1.1
VMP1-213ENST00000591877 KMT2EQ8IZD2 1858 aa8.19□□□□□ -1.1
VMP1-213ENST00000591877 DOCK6Q96HP0 2047 aa8.19□□□□□ -1.1
VMP1-213ENST00000591877 WASH4PA8MWX3 477 aa8.19□□□□□ -1.1
VMP1-213ENST00000591877 N4BP3O15049 544 aa8.19□□□□□ -1.1
VMP1-213ENST00000591877 PEX14O75381 377 aa8.19□□□□□ -1.1
VMP1-213ENST00000591877 SNUPNO95149 360 aaKnown RBP8.19□□□□□ -1.1
VMP1-213ENST00000591877 ESR1P03372 595 aa8.19□□□□□ -1.1
VMP1-213ENST00000591877 SRGAP2BP0DMP2 458 aa8.19□□□□□ -1.1
VMP1-213ENST00000591877 SP100P23497 879 aaPredicted RBP8.19□□□□□ -1.1
VMP1-213ENST00000591877 IGFBP6P24592 240 aaPredicted RBP8.19□□□□□ -1.1
VMP1-213ENST00000591877 RECQLP46063 649 aaPredicted RBP8.19□□□□□ -1.1
VMP1-213ENST00000591877 MCM2P49736 904 aa8.19□□□□□ -1.1
VMP1-213ENST00000591877 ITIH3Q06033 890 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms