RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 GGPS1O95749 300 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 PRKCAP17252 672 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 UGT1A6P19224 532 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 UGT1A1P22309 533 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 UGT1A4P22310 534 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 UGT1A3P35503 534 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 UGT1A5P35504 534 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 WDR4P57081 412 aaKnown RBP12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 TRIP10Q15642 601 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 GRAMD1BQ3KR37 738 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 CYP4A22Q5TCH4 519 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 TMC5Q6UXY8 1006 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 SH3BP5LQ7L8J4 393 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 TRIML2Q8N7C3 387 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 POU5F2Q8N7G0 328 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 EPS8L1Q8TE68 723 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 ZDHHC15Q96MV8 337 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 VPS35Q96QK1 796 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 ACCSQ96QU6 501 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 TMEM206Q9H813 350 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 UGT1A7Q9HAW7 530 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 UGT1A10Q9HAW8 530 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 UGT1A8Q9HAW9 530 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 HSPBP1Q9NZL4 362 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 PCDHGB4Q9UN71 923 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 PCDHGB5Q9Y5G0 923 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 ZNF254O75437 659 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 KLHL2O95198 593 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 RPL17P18621 184 aaKnown RBP12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 CTNNA2P26232 953 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 ARL1P40616 181 aaPredicted RBP12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 IREB2P48200 963 aaKnown RBP12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 MYBPC1Q00872 1141 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 TAS2R42Q7RTR8 314 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 GMCL1P1Q8NEA9 526 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 ZSWIM2Q8NEG5 633 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 PYDC1Q8WXC3 89 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 C17orf80Q9BSJ5 609 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 ANAPC7Q9UJX3 599 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 TMCC3Q9ULS5 477 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 UBE4BO95155 1302 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 NHSQ6T4R5 1651 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 DENRO43583 198 aaKnown RBP12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 NFIL3Q16649 462 aa12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 RGS9BPQ6ZS82 235 aa12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 ELMOD2Q8IZ81 293 aa12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 MTBPQ96DY7 904 aa12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 WNK4Q96J92 1243 aa12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 S100A14Q9HCY8 104 aa12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 SLC16A4O15374 487 aa12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 CCDC130P13994 396 aa12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 WEE1P30291 646 aa12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 MAPK4P31152 587 aa12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 MFAP3P55082 362 aa12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 PEX3P56589 373 aa12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 EPC2Q52LR7 807 aa12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 AAGABQ6PD74 315 aa12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 AMIGO2Q86SJ2 522 aa12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 TMEM151BQ8IW70 566 aa12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 LMO3Q8TAP4 145 aa12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 ACER1Q8TDN7 264 aa12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 SLC5A5Q92911 643 aa12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 RANBP9Q96S59 729 aa12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 FAM118BQ9BPY3 351 aa12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 HEMGNQ9BXL5 484 aa12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 RUBCNLQ9H714 662 aa12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 KCNN3Q9UGI6 736 aa12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 DCTN4Q9UJW0 460 aa12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 ADAMTS6Q9UKP5 1117 aa12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 CFL2Q9Y281 166 aa12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 SBF2Q86WG5 1849 aa12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 CDK5RAP2Q96SN8 1893 aa12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 KRT6AP02538 564 aa12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 KRT6BP04259 564 aa12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 TPTEP56180 551 aa12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 JAG1P78504 1218 aa12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 NFE2Q16621 373 aaPredicted RBP12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 LLGL2Q6P1M3 1020 aa12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 CYFIP1Q7L576 1253 aa12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 ANGPTL6Q8NI99 470 aa12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 ANKRD49Q8WVL7 239 aa12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 PSPC1Q8WXF1 523 aaKnown RBP12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 TMIGD2Q96BF3 282 aa12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 CLPTM1LQ96KA5 538 aa12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 TP63Q9H3D4 680 aaPredicted RBP12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.63□□□□□ -0.393e-6■■■■■ 29.3
SMARCA4-217ENST00000591595 NEK6Q9HC98 313 aa12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 KCND2Q9NZV8 630 aa12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 ERGIC3Q9Y282 383 aa12.63□□□□□ -0.39
SMARCA4-217ENST00000591595 KDM4FA0A1W2PPD8 638 aa12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 FAM47DPA6NHR8 397 aa12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 J3QRK9 145 aa12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 CCRL2O00421 344 aa12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 MYO1DO94832 1006 aa12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 ATF2P15336 505 aa12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 POLR2CP19387 275 aaPredicted RBP12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 M6PRP20645 277 aa12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 PRKCEQ02156 737 aa12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 SNAPC2Q13487 334 aa12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 RRP1BQ14684 758 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms