RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 KAT7O95251 611 aa23.36■■□□□ 1.33
MBD3-208ENST00000590830 LTFP02788 710 aa23.36■■□□□ 1.33
MBD3-208ENST00000590830 KDSRQ06136 332 aa23.36■■□□□ 1.33
MBD3-208ENST00000590830 RAPGEF1Q13905 1077 aa23.36■■□□□ 1.33
MBD3-208ENST00000590830 EMC10Q5UCC4 262 aa23.36■■□□□ 1.33
MBD3-208ENST00000590830 MSANTD2Q6P1R3 559 aa23.36■■□□□ 1.33
MBD3-208ENST00000590830 DENND1CQ8IV53 801 aa23.36■■□□□ 1.33
MBD3-208ENST00000590830 PASD1Q8IV76 773 aa23.36■■□□□ 1.33
MBD3-208ENST00000590830 AOPEPQ8N6M6 819 aa23.36■■□□□ 1.33
MBD3-208ENST00000590830 USP33Q8TEY7 942 aa23.36■■□□□ 1.33
MBD3-208ENST00000590830 FAM126AQ9BYI3 521 aaPredicted RBP23.36■■□□□ 1.33
MBD3-208ENST00000590830 DCLK3Q9C098 648 aa23.36■■□□□ 1.33
MBD3-208ENST00000590830 ARHGEF4Q9NR80 690 aa23.36■■□□□ 1.33
MBD3-208ENST00000590830 SIK3Q9Y2K2 1263 aa23.36■■□□□ 1.33
MBD3-208ENST00000590830 EPHB6O15197 1021 aa23.35■■□□□ 1.33
MBD3-208ENST00000590830 MSI1O43347 362 aaKnown RBP23.35■■□□□ 1.33
MBD3-208ENST00000590830 ATG13O75143 517 aa23.35■■□□□ 1.33
MBD3-208ENST00000590830 GRIA2P42262 883 aa23.35■■□□□ 1.33
MBD3-208ENST00000590830 ACADSBP45954 432 aa23.35■■□□□ 1.33
MBD3-208ENST00000590830 FNTBP49356 437 aa23.35■■□□□ 1.33
MBD3-208ENST00000590830 SEC13P55735 322 aa23.35■■□□□ 1.33
MBD3-208ENST00000590830 PDCLQ13371 301 aa23.35■■□□□ 1.33
MBD3-208ENST00000590830 ZC3H14Q6PJT7 736 aaKnown RBP23.35■■□□□ 1.33
MBD3-208ENST00000590830 ATRIPQ8WXE1 791 aa23.35■■□□□ 1.33
MBD3-208ENST00000590830 PLD4Q96BZ4 506 aa23.35■■□□□ 1.33
MBD3-208ENST00000590830 FUCA2Q9BTY2 467 aa23.35■■□□□ 1.33
MBD3-208ENST00000590830 BBS2Q9BXC9 721 aa23.35■■□□□ 1.33
MBD3-208ENST00000590830 STK33Q9BYT3 514 aa23.35■■□□□ 1.33
MBD3-208ENST00000590830 LHX5Q9H2C1 402 aa23.35■■□□□ 1.33
MBD3-208ENST00000590830 WDR35Q9P2L0 1181 aa23.35■■□□□ 1.33
MBD3-208ENST00000590830 ZNF510Q9Y2H8 683 aa23.35■■□□□ 1.33
MBD3-208ENST00000590830 HBS1LQ9Y450 684 aaKnown RBP23.35■■□□□ 1.33
MBD3-208ENST00000590830 ATG2BQ96BY7 2078 aa23.35■■□□□ 1.33
MBD3-208ENST00000590830 NEDD8-MDP1E9PL57 170 aa23.34■■□□□ 1.33
MBD3-208ENST00000590830 ATP1A3P13637 1013 aa23.34■■□□□ 1.33
MBD3-208ENST00000590830 TYRP14679 529 aa23.34■■□□□ 1.33
MBD3-208ENST00000590830 HOXA6P31267 233 aa23.34■■□□□ 1.33
MBD3-208ENST00000590830 PPP2R5DQ14738 602 aa23.34■■□□□ 1.33
MBD3-208ENST00000590830 TAF5Q15542 800 aa23.34■■□□□ 1.33
MBD3-208ENST00000590830 C2orf27AQ580R0 203 aa23.34■■□□□ 1.33
MBD3-208ENST00000590830 DHX40Q8IX18 779 aaKnown RBP23.34■■□□□ 1.33
MBD3-208ENST00000590830 SUMF1Q8NBK3 374 aa23.34■■□□□ 1.33
MBD3-208ENST00000590830 BHMTQ93088 406 aa23.34■■□□□ 1.33
MBD3-208ENST00000590830 PIWIL1Q96J94 861 aaKnown RBP23.34■■□□□ 1.33
MBD3-208ENST00000590830 CPXM1Q96SM3 734 aa23.34■■□□□ 1.33
MBD3-208ENST00000590830 SEMA4AQ9H3S1 761 aa23.34■■□□□ 1.33
MBD3-208ENST00000590830 PLK2Q9NYY3 685 aa23.34■■□□□ 1.33
MBD3-208ENST00000590830 DEC1Q9P2X7 70 aa23.34■■□□□ 1.33
MBD3-208ENST00000590830 HCN2Q9UL51 889 aa23.34■■□□□ 1.33
MBD3-208ENST00000590830 NAALADL1Q9UQQ1 740 aa23.34■■□□□ 1.33
MBD3-208ENST00000590830 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.33■■□□□ 1.33
MBD3-208ENST00000590830 CACNG3O60359 315 aa23.33■■□□□ 1.33
MBD3-208ENST00000590830 APODP05090 189 aa23.33■■□□□ 1.33
MBD3-208ENST00000590830 CISD3P0C7P0 127 aa23.33■■□□□ 1.33
MBD3-208ENST00000590830 KIR2DL1P43626 348 aaPredicted RBP23.33■■□□□ 1.33
MBD3-208ENST00000590830 PXNP49023 591 aaPredicted RBP23.33■■□□□ 1.33
MBD3-208ENST00000590830 NRLP54845 237 aa23.33■■□□□ 1.33
MBD3-208ENST00000590830 KLHL40Q2TBA0 621 aa23.33■■□□□ 1.33
MBD3-208ENST00000590830 SYPL2Q5VXT5 272 aa23.33■■□□□ 1.33
MBD3-208ENST00000590830 HEATR6Q6AI08 1181 aaKnown RBP23.33■■□□□ 1.33
MBD3-208ENST00000590830 SYT13Q7L8C5 426 aa23.33■■□□□ 1.33
MBD3-208ENST00000590830 FAM217AQ8IXS0 508 aa23.33■■□□□ 1.33
MBD3-208ENST00000590830 DDX1Q92499 740 aaKnown RBP23.33■■□□□ 1.33
MBD3-208ENST00000590830 BPIFA3Q9BQP9 254 aa23.33■■□□□ 1.33
MBD3-208ENST00000590830 FAM207AQ9NSI2 230 aaPredicted RBP23.33■■□□□ 1.33
MBD3-208ENST00000590830 FANCMQ8IYD8 2048 aa23.32■■□□□ 1.32
MBD3-208ENST00000590830 LGALS16A8MUM7 142 aa23.32■■□□□ 1.32
MBD3-208ENST00000590830 F8VZ95 297 aa23.32■■□□□ 1.32
MBD3-208ENST00000590830 HRO43593 1189 aa23.32■■□□□ 1.32
MBD3-208ENST00000590830 PENKP01210 267 aaPredicted RBP23.32■■□□□ 1.32
MBD3-208ENST00000590830 IGLV3-27P01718 113 aa23.32■■□□□ 1.32
MBD3-208ENST00000590830 CYP11B1P15538 503 aa23.32■■□□□ 1.32
MBD3-208ENST00000590830 CDK11BP21127 795 aaKnown RBP23.32■■□□□ 1.32
MBD3-208ENST00000590830 KRT9P35527 623 aa23.32■■□□□ 1.32
MBD3-208ENST00000590830 TNFRSF4P43489 277 aa23.32■■□□□ 1.32
MBD3-208ENST00000590830 BPIFB4P59827 614 aa23.32■■□□□ 1.32
MBD3-208ENST00000590830 SYCP1Q15431 976 aa23.32■■□□□ 1.32
MBD3-208ENST00000590830 FKBP15Q5T1M5 1219 aa23.32■■□□□ 1.32
MBD3-208ENST00000590830 FYB2Q5VWT5 728 aa23.32■■□□□ 1.32
MBD3-208ENST00000590830 TOGARAM2Q6ZUX3 1019 aa23.32■■□□□ 1.32
MBD3-208ENST00000590830 C1orf131Q8NDD1 294 aaKnown RBP23.32■■□□□ 1.32
MBD3-208ENST00000590830 PPP1R13BQ96KQ4 1090 aa23.32■■□□□ 1.32
MBD3-208ENST00000590830 ZDHHC4Q9NPG8 344 aa23.32■■□□□ 1.32
MBD3-208ENST00000590830 DNAJC17Q9NVM6 304 aaKnown RBP23.32■■□□□ 1.32
MBD3-208ENST00000590830 FBXO10Q9UK96 956 aa23.32■■□□□ 1.32
MBD3-208ENST00000590830 SLC8A2Q9UPR5 921 aa23.32■■□□□ 1.32
MBD3-208ENST00000590830 TBC1D3BA6NDS4 549 aa23.31■■□□□ 1.32
MBD3-208ENST00000590830 GFRA2O00451 464 aa23.31■■□□□ 1.32
MBD3-208ENST00000590830 LMNAP02545 664 aaKnown RBP23.31■■□□□ 1.32
MBD3-208ENST00000590830 TPM2P07951 284 aa23.31■■□□□ 1.32
MBD3-208ENST00000590830 NCAM1P13591 858 aa23.31■■□□□ 1.32
MBD3-208ENST00000590830 CHKAP35790 457 aa23.31■■□□□ 1.32
MBD3-208ENST00000590830 POLR2FP61218 127 aaKnown RBP23.31■■□□□ 1.32
MBD3-208ENST00000590830 SRSF5Q13243 272 aaKnown RBP23.31■■□□□ 1.32
MBD3-208ENST00000590830 DMC1Q14565 340 aa23.31■■□□□ 1.32
MBD3-208ENST00000590830 BEND5Q7L4P6 421 aa23.31■■□□□ 1.32
MBD3-208ENST00000590830 NOP9Q86U38 636 aaKnown RBP23.31■■□□□ 1.32
MBD3-208ENST00000590830 CPXM2Q8N436 756 aa23.31■■□□□ 1.32
MBD3-208ENST00000590830 CCDC33Q8N5R6 958 aa23.31■■□□□ 1.32
MBD3-208ENST00000590830 DQX1Q8TE96 717 aaKnown RBP23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms