RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 RSRC2Q7L4I2 434 aaKnown RBP18.84■□□□□ 0.61
PRKCSH-211ENST00000590098 IPO4Q8TEX9 1081 aaKnown RBP18.84■□□□□ 0.61
PRKCSH-211ENST00000590098 ACOX2Q99424 681 aa18.84■□□□□ 0.61
PRKCSH-211ENST00000590098 ARID3AQ99856 593 aa18.84■□□□□ 0.61
PRKCSH-211ENST00000590098 PLK2Q9NYY3 685 aa18.84■□□□□ 0.61
PRKCSH-211ENST00000590098 STRIP2Q9ULQ0 834 aa18.84■□□□□ 0.61
PRKCSH-211ENST00000590098 CDX4O14627 284 aaPredicted RBP18.83■□□□□ 0.6
PRKCSH-211ENST00000590098 ZNF217O75362 1048 aa18.83■□□□□ 0.6
PRKCSH-211ENST00000590098 HMBSP08397 361 aa18.83■□□□□ 0.6
PRKCSH-211ENST00000590098 CISD3P0C7P0 127 aa18.83■□□□□ 0.6
PRKCSH-211ENST00000590098 PRCPP42785 496 aa18.83■□□□□ 0.6
PRKCSH-211ENST00000590098 UAP1L1Q3KQV9 507 aa18.83■□□□□ 0.6
PRKCSH-211ENST00000590098 SH3PXD2AQ5TCZ1 1133 aa18.83■□□□□ 0.6
PRKCSH-211ENST00000590098 ZNF658Q5TYW1 1059 aaPredicted RBP18.83■□□□□ 0.6
PRKCSH-211ENST00000590098 ARHGAP17Q68EM7 881 aa18.83■□□□□ 0.6
PRKCSH-211ENST00000590098 PIGZQ86VD9 579 aa18.83■□□□□ 0.6
PRKCSH-211ENST00000590098 ANKRD52Q8NB46 1076 aa18.83■□□□□ 0.6
PRKCSH-211ENST00000590098 TATDN2Q93075 761 aa18.83■□□□□ 0.6
PRKCSH-211ENST00000590098 GSDMAQ96QA5 445 aa18.83■□□□□ 0.6
PRKCSH-211ENST00000590098 GABRG3Q99928 467 aa18.83■□□□□ 0.6
PRKCSH-211ENST00000590098 TMEM74BQ9NUR3 256 aa18.83■□□□□ 0.6
PRKCSH-211ENST00000590098 ASCC3Q8N3C0 2202 aaKnown RBP18.83■□□□□ 0.6
PRKCSH-211ENST00000590098 USP24Q9UPU5 2620 aa18.83■□□□□ 0.6
PRKCSH-211ENST00000590098 GFRA2O00451 464 aa18.82■□□□□ 0.6
PRKCSH-211ENST00000590098 GIPC1O14908 333 aa18.82■□□□□ 0.6
PRKCSH-211ENST00000590098 SLC16A3O15427 465 aaKnown RBP18.82■□□□□ 0.6
PRKCSH-211ENST00000590098 SMC2O95347 1197 aa18.82■□□□□ 0.6
PRKCSH-211ENST00000590098 KLKB1P03952 638 aa18.82■□□□□ 0.6
PRKCSH-211ENST00000590098 ITPKAP23677 461 aa18.82■□□□□ 0.6
PRKCSH-211ENST00000590098 CORO1AP31146 461 aaKnown RBP18.82■□□□□ 0.6
PRKCSH-211ENST00000590098 HOXD12P35452 270 aa18.82■□□□□ 0.6
PRKCSH-211ENST00000590098 YWHAGP61981 247 aaKnown RBP eCLIP18.82■□□□□ 0.6
PRKCSH-211ENST00000590098 SHC2P98077 582 aa18.82■□□□□ 0.6
PRKCSH-211ENST00000590098 FKBP3Q00688 224 aaKnown RBP18.82■□□□□ 0.6
PRKCSH-211ENST00000590098 FMR1NBQ8N0W7 255 aaPredicted RBP18.82■□□□□ 0.6
PRKCSH-211ENST00000590098 DEFB119Q8N690 84 aa18.82■□□□□ 0.6
PRKCSH-211ENST00000590098 CEP76Q8TAP6 659 aa18.82■□□□□ 0.6
PRKCSH-211ENST00000590098 ERLEC1Q96DZ1 483 aa18.82■□□□□ 0.6
PRKCSH-211ENST00000590098 CACNA2D2Q9NY47 1150 aa18.82■□□□□ 0.6
PRKCSH-211ENST00000590098 MARCH2Q9P0N8 246 aa18.82■□□□□ 0.6
PRKCSH-211ENST00000590098 PILRBQ9UKJ0 227 aa18.82■□□□□ 0.6
PRKCSH-211ENST00000590098 ATXN2Q99700 1313 aaKnown RBP18.81■□□□□ 0.6
PRKCSH-211ENST00000590098 ZBED1O96006 694 aa18.81■□□□□ 0.6
PRKCSH-211ENST00000590098 CYBBP04839 570 aa18.81■□□□□ 0.6
PRKCSH-211ENST00000590098 CFIP05156 583 aa18.81■□□□□ 0.6
PRKCSH-211ENST00000590098 ENGP17813 658 aa18.81■□□□□ 0.6
PRKCSH-211ENST00000590098 NDUFV2P19404 249 aa18.81■□□□□ 0.6
PRKCSH-211ENST00000590098 MAPK8P45983 427 aa18.81■□□□□ 0.6
PRKCSH-211ENST00000590098 TKTL1P51854 596 aa18.81■□□□□ 0.6
PRKCSH-211ENST00000590098 YWHAEP62258 255 aaKnown RBP18.81■□□□□ 0.6
PRKCSH-211ENST00000590098 DUOXA1Q1HG43 343 aa18.81■□□□□ 0.6
PRKCSH-211ENST00000590098 CBWD6Q4V339 395 aa18.81■□□□□ 0.6
PRKCSH-211ENST00000590098 RAB41Q5JT25 222 aa18.81■□□□□ 0.6
PRKCSH-211ENST00000590098 CBWD3Q5JTY5 395 aa18.81■□□□□ 0.6
PRKCSH-211ENST00000590098 CBWD5Q5RIA9 395 aa18.81■□□□□ 0.6
PRKCSH-211ENST00000590098 KIAA1211LQ6NV74 962 aa18.81■□□□□ 0.6
PRKCSH-211ENST00000590098 SLC23A3Q6PIS1 610 aa18.81■□□□□ 0.6
PRKCSH-211ENST00000590098 RABEPKQ7Z6M1 372 aa18.81■□□□□ 0.6
PRKCSH-211ENST00000590098 GTPBP4Q9BZE4 634 aaKnown RBP18.81■□□□□ 0.6
PRKCSH-211ENST00000590098 HESX1Q9UBX0 185 aa18.81■□□□□ 0.6
PRKCSH-211ENST00000590098 HOOK1Q9UJC3 728 aaKnown RBP18.81■□□□□ 0.6
PRKCSH-211ENST00000590098 FBXO10Q9UK96 956 aa18.81■□□□□ 0.6
PRKCSH-211ENST00000590098 AGO1Q9UL18 857 aaKnown RBP18.81■□□□□ 0.6
PRKCSH-211ENST00000590098 SLC27A6Q9Y2P4 619 aa18.81■□□□□ 0.6
PRKCSH-211ENST00000590098 RAD54BQ9Y620 910 aa18.81■□□□□ 0.6
PRKCSH-211ENST00000590098 ADAMTS9Q9P2N4 1935 aa18.8■□□□□ 0.6
PRKCSH-211ENST00000590098 IGHV1OR15-9A0A0B4J2B8 117 aa18.8■□□□□ 0.6
PRKCSH-211ENST00000590098 SLC12A8A0AV02 714 aa18.8■□□□□ 0.6
PRKCSH-211ENST00000590098 PENKP01210 267 aaPredicted RBP18.8■□□□□ 0.6
PRKCSH-211ENST00000590098 CEACAM1P13688 526 aa18.8■□□□□ 0.6
PRKCSH-211ENST00000590098 CSRP1P21291 193 aaKnown RBP18.8■□□□□ 0.6
PRKCSH-211ENST00000590098 ATXN3P54252 364 aaPredicted RBP18.8■□□□□ 0.6
PRKCSH-211ENST00000590098 ZNF33AQ06730 810 aa18.8■□□□□ 0.6
PRKCSH-211ENST00000590098 ZNF252P-AS1Q0IIN9 211 aa18.8■□□□□ 0.6
PRKCSH-211ENST00000590098 CUL2Q13617 745 aa18.8■□□□□ 0.6
PRKCSH-211ENST00000590098 E2F5Q15329 346 aa18.8■□□□□ 0.6
PRKCSH-211ENST00000590098 GOLGA7BQ2TAP0 167 aa18.8■□□□□ 0.6
PRKCSH-211ENST00000590098 COBLL1Q53SF7 1204 aa18.8■□□□□ 0.6
PRKCSH-211ENST00000590098 SGO2Q562F6 1265 aa18.8■□□□□ 0.6
PRKCSH-211ENST00000590098 FYB2Q5VWT5 728 aa18.8■□□□□ 0.6
PRKCSH-211ENST00000590098 ANKRD40Q6AI12 368 aa18.8■□□□□ 0.6
PRKCSH-211ENST00000590098 DENND1CQ8IV53 801 aa18.8■□□□□ 0.6
PRKCSH-211ENST00000590098 UCMAQ8WVF2 138 aa18.8■□□□□ 0.6
PRKCSH-211ENST00000590098 SMARCE1Q969G3 411 aa18.8■□□□□ 0.6
PRKCSH-211ENST00000590098 P2RY11Q96G91 374 aa18.8■□□□□ 0.6
PRKCSH-211ENST00000590098 LRRC4Q9HBW1 653 aa18.8■□□□□ 0.6
PRKCSH-211ENST00000590098 CD248Q9HCU0 757 aa18.8■□□□□ 0.6
PRKCSH-211ENST00000590098 ARMCX3Q9UH62 379 aaPredicted RBP18.8■□□□□ 0.6
PRKCSH-211ENST00000590098 CYP8B1Q9UNU6 501 aa18.8■□□□□ 0.6
PRKCSH-211ENST00000590098 COQ4Q9Y3A0 265 aa18.8■□□□□ 0.6
PRKCSH-211ENST00000590098 STON1Q9Y6Q2 735 aa18.8■□□□□ 0.6
PRKCSH-211ENST00000590098 XPO1O14980 1071 aaKnown RBP18.79■□□□□ 0.6
PRKCSH-211ENST00000590098 NPC1O15118 1278 aa18.79■□□□□ 0.6
PRKCSH-211ENST00000590098 NDUFS2O75306 463 aa18.79■□□□□ 0.6
PRKCSH-211ENST00000590098 CD19P15391 556 aa18.79■□□□□ 0.6
PRKCSH-211ENST00000590098 BCAT1P54687 386 aa18.79■□□□□ 0.6
PRKCSH-211ENST00000590098 MFAP3P55082 362 aa18.79■□□□□ 0.6
PRKCSH-211ENST00000590098 LRRC63Q05C16 580 aa18.79■□□□□ 0.6
PRKCSH-211ENST00000590098 GFPT1Q06210 699 aaPredicted RBP18.79■□□□□ 0.6
PRKCSH-211ENST00000590098 PDE4CQ08493 712 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms