RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 MTF1Q14872 753 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 PPP2R5EQ16537 467 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 TCTN1Q2MV58 587 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 DENND1BQ6P3S1 775 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 MMS22LQ6ZRQ5 1243 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 SLC26A9Q7LBE3 791 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 DAAM2Q86T65 1068 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 PSTKQ8IV42 348 aaKnown RBP7.67□□□□□ -1.18
SMAD4-210ENST00000590061 MAP7D3Q8IWC1 876 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 REXO1L1PQ8IX06 675 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 TCEAL8Q8IYN2 117 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 TDHQ8IZJ6 230 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 NUP93Q8N1F7 819 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 ZNF276Q8N554 614 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 NIPA2Q8N8Q9 360 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 MRPL43Q8N983 215 aaKnown RBP7.67□□□□□ -1.18
SMAD4-210ENST00000590061 C12orf29Q8N999 325 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 KLHL23Q8NBE8 558 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 ACRBPQ8NEB7 543 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 MNS1Q8NEH6 495 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 ZNF564Q8TBZ8 553 aaPredicted RBP7.67□□□□□ -1.18
SMAD4-210ENST00000590061 MICAL1Q8TDZ2 1067 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 HASPINQ8TF76 798 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 MAIP1Q8WWC4 291 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 MYLPFQ96A32 169 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 MCRS1Q96EZ8 462 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 TWNKQ96RR1 684 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 TBCBQ99426 244 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 PKMYT1Q99640 499 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 DESI2Q9BSY9 194 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 CNPY3Q9BT09 278 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 NUP85Q9BW27 656 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 THAP2Q9H0W7 228 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 ENTPD7Q9NQZ7 604 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 FAM49BQ9NUQ9 324 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 TRMT1Q9NXH9 659 aaKnown RBP7.67□□□□□ -1.18
SMAD4-210ENST00000590061 CXXC1Q9P0U4 656 aaPredicted RBP7.67□□□□□ -1.18
SMAD4-210ENST00000590061 AMFRQ9UKV5 643 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 PYCARDQ9ULZ3 195 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 TIMM13Q9Y5L4 95 aaPredicted RBP7.67□□□□□ -1.18
SMAD4-210ENST00000590061 ALPK3Q96L96 1907 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 MACROD2A1Z1Q3 448 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 LINC01553A4QN01 128 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 H0YGN5 161 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 H3BNC9 293 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 I3L4J1 428 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 PIK3R2O00459 728 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 CAPN9O14815 690 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 ZNF263O14978 683 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 XYLBO75191 536 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 GLUD1P00367 558 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 ITGB1P05556 798 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 HNRNPA1P09651 372 aaKnown RBP eCLIP7.66□□□□□ -1.18
SMAD4-210ENST00000590061 HAPLN1P10915 354 aaPredicted RBP7.66□□□□□ -1.18
SMAD4-210ENST00000590061 TNNT1P13805 278 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 CCDC130P13994 396 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 BDNFP23560 247 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 ACAT1P24752 427 aaKnown RBP7.66□□□□□ -1.18
SMAD4-210ENST00000590061 YWHAQP27348 245 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 HOXA9P31269 272 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 OR1D2P34982 312 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 PCK1P35558 622 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 GATMP50440 423 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 ZNF143P52747 638 aaPredicted RBP7.66□□□□□ -1.18
SMAD4-210ENST00000590061 EPHB4P54760 987 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 MAP3K7CLP57077 242 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 ELOAQ14241 798 aaKnown RBP7.66□□□□□ -1.18
SMAD4-210ENST00000590061 RPS6KA1Q15418 735 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 SHHQ15465 462 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 ARL13BQ3SXY8 428 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 BOLA3Q53S33 107 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 RAB41Q5JT25 222 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 ZNF569Q5MCW4 686 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 FAM102AQ5T9C2 384 aaPredicted RBP7.66□□□□□ -1.18
SMAD4-210ENST00000590061 PM20D1Q6GTS8 502 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 OR6B2Q6IFH4 312 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 CLEC20AQ6ZU45 233 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 DENND5BQ6ZUT9 1274 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 PEX26Q7Z412 305 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 POLNQ7Z5Q5 900 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 PIGZQ86VD9 579 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 OSTM1Q86WC4 334 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 VSIG1Q86XK7 387 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 PASD1Q8IV76 773 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 UBA3Q8TBC4 463 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 RNF139Q8WU17 664 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 MYO19Q96H55 970 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 PBKQ96KB5 322 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 FAM84AQ96KN4 292 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 RPGRIP1Q96KN7 1286 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 GCNAQ96QF7 691 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 PCDHB18PQ96TA0 734 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 NAPGQ99747 312 aaPredicted RBP7.66□□□□□ -1.18
SMAD4-210ENST00000590061 TCF25Q9BQ70 676 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 RTP3Q9BQQ7 232 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 C11orf70Q9BRQ4 267 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 ZBP1Q9H171 429 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 DPEP3Q9H4B8 488 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 POPDC2Q9HBU9 364 aa7.66□□□□□ -1.18
SMAD4-210ENST00000590061 CRTAC1Q9NQ79 661 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms