RNA–Protein interactions for RNA: ENST00000589933.1

TMC6-213, Transcript of transmembrane channel like 6, humanhuman

TSL 3

Gene TMC6, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-213ENST00000589933 NDUFS2O75306 463 aa22.13■■□□□ 1.13
TMC6-213ENST00000589933 CFIP05156 583 aa22.13■■□□□ 1.13
TMC6-213ENST00000589933 CSRP1P21291 193 aaKnown RBP22.13■■□□□ 1.13
TMC6-213ENST00000589933 PTGER3P43115 390 aa22.13■■□□□ 1.13
TMC6-213ENST00000589933 MCCD1P59942 119 aaPredicted RBP22.13■■□□□ 1.13
TMC6-213ENST00000589933 FKBP3Q00688 224 aaKnown RBP22.13■■□□□ 1.13
TMC6-213ENST00000589933 DUOXA1Q1HG43 343 aa22.13■■□□□ 1.13
TMC6-213ENST00000589933 SH3PXD2AQ5TCZ1 1133 aa22.13■■□□□ 1.13
TMC6-213ENST00000589933 ARHGAP17Q68EM7 881 aa22.13■■□□□ 1.13
TMC6-213ENST00000589933 SLC23A3Q6PIS1 610 aa22.13■■□□□ 1.13
TMC6-213ENST00000589933 SCD5Q86SK9 330 aa22.13■■□□□ 1.13
TMC6-213ENST00000589933 ANKRD52Q8NB46 1076 aa22.13■■□□□ 1.13
TMC6-213ENST00000589933 BHMTQ93088 406 aa22.13■■□□□ 1.13
TMC6-213ENST00000589933 GABRG3Q99928 467 aa22.13■■□□□ 1.13
TMC6-213ENST00000589933 MARCH2Q9P0N8 246 aa22.13■■□□□ 1.13
TMC6-213ENST00000589933 ASCC3Q8N3C0 2202 aaKnown RBP22.12■■□□□ 1.13
TMC6-213ENST00000589933 ADAMTS9Q9P2N4 1935 aa22.12■■□□□ 1.13
TMC6-213ENST00000589933 TRIM24O15164 1050 aa22.12■■□□□ 1.13
TMC6-213ENST00000589933 SLC16A3O15427 465 aaKnown RBP22.12■■□□□ 1.13
TMC6-213ENST00000589933 RAD23BP54727 409 aa22.12■■□□□ 1.13
TMC6-213ENST00000589933 GFPT1Q06210 699 aaPredicted RBP22.12■■□□□ 1.13
TMC6-213ENST00000589933 STIM1Q13586 685 aa22.12■■□□□ 1.13
TMC6-213ENST00000589933 ZNF658Q5TYW1 1059 aaPredicted RBP22.12■■□□□ 1.13
TMC6-213ENST00000589933 PIGZQ86VD9 579 aa22.12■■□□□ 1.13
TMC6-213ENST00000589933 SMYD4Q8IYR2 804 aaPredicted RBP22.12■■□□□ 1.13
TMC6-213ENST00000589933 FRMD1Q8N878 549 aa22.12■■□□□ 1.13
TMC6-213ENST00000589933 SLC4A11Q8NBS3 891 aa22.12■■□□□ 1.13
TMC6-213ENST00000589933 SEMA4DQ92854 862 aa22.12■■□□□ 1.13
TMC6-213ENST00000589933 LRRC4Q9HBW1 653 aa22.12■■□□□ 1.13
TMC6-213ENST00000589933 GDPD2Q9HCC8 539 aa22.12■■□□□ 1.13
TMC6-213ENST00000589933 OLA1Q9NTK5 396 aaKnown RBP22.12■■□□□ 1.13
TMC6-213ENST00000589933 PLK2Q9NYY3 685 aa22.12■■□□□ 1.13
TMC6-213ENST00000589933 PILRBQ9UKJ0 227 aa22.12■■□□□ 1.13
TMC6-213ENST00000589933 PRRT4C9JH25 899 aa22.11■■□□□ 1.13
TMC6-213ENST00000589933 CDX4O14627 284 aaPredicted RBP22.11■■□□□ 1.13
TMC6-213ENST00000589933 HMBSP08397 361 aa22.11■■□□□ 1.13
TMC6-213ENST00000589933 CORO1AP31146 461 aaKnown RBP22.11■■□□□ 1.13
TMC6-213ENST00000589933 ZNF132P52740 706 aa22.11■■□□□ 1.13
TMC6-213ENST00000589933 BCAT1P54687 386 aa22.11■■□□□ 1.13
TMC6-213ENST00000589933 YWHAGP61981 247 aaKnown RBP eCLIP22.11■■□□□ 1.13
TMC6-213ENST00000589933 ZNF33AQ06730 810 aa22.11■■□□□ 1.13
TMC6-213ENST00000589933 ZNF252P-AS1Q0IIN9 211 aa22.11■■□□□ 1.13
TMC6-213ENST00000589933 PNOCQ13519 176 aa22.11■■□□□ 1.13
TMC6-213ENST00000589933 SGO2Q562F6 1265 aa22.11■■□□□ 1.13
TMC6-213ENST00000589933 TOGARAM2Q6ZUX3 1019 aa22.11■■□□□ 1.13
TMC6-213ENST00000589933 HDDC3Q8N4P3 179 aa22.11■■□□□ 1.13
TMC6-213ENST00000589933 EEF2KMTQ96G04 330 aa22.11■■□□□ 1.13
TMC6-213ENST00000589933 IPO9Q96P70 1041 aaKnown RBP22.11■■□□□ 1.13
TMC6-213ENST00000589933 ACOX2Q99424 681 aa22.11■■□□□ 1.13
TMC6-213ENST00000589933 SLC6A14Q9UN76 642 aa22.11■■□□□ 1.13
TMC6-213ENST00000589933 SLC27A6Q9Y2P4 619 aa22.11■■□□□ 1.13
TMC6-213ENST00000589933 A0A1W2PQF6 199 aa22.1■■□□□ 1.13
TMC6-213ENST00000589933 SLC12A8A0AV02 714 aa22.1■■□□□ 1.13
TMC6-213ENST00000589933 ZBED1O96006 694 aa22.1■■□□□ 1.13
TMC6-213ENST00000589933 CISD3P0C7P0 127 aa22.1■■□□□ 1.13
TMC6-213ENST00000589933 ENGP17813 658 aa22.1■■□□□ 1.13
TMC6-213ENST00000589933 NDUFV2P19404 249 aa22.1■■□□□ 1.13
TMC6-213ENST00000589933 ITPKAP23677 461 aa22.1■■□□□ 1.13
TMC6-213ENST00000589933 TBXAS1P24557 533 aaPredicted RBP22.1■■□□□ 1.13
TMC6-213ENST00000589933 PRCPP42785 496 aa22.1■■□□□ 1.13
TMC6-213ENST00000589933 MAPK8P45983 427 aa22.1■■□□□ 1.13
TMC6-213ENST00000589933 TKTL1P51854 596 aa22.1■■□□□ 1.13
TMC6-213ENST00000589933 COBLL1Q53SF7 1204 aa22.1■■□□□ 1.13
TMC6-213ENST00000589933 SYCP2LQ5T4T6 812 aa22.1■■□□□ 1.13
TMC6-213ENST00000589933 RNF139Q8WU17 664 aa22.1■■□□□ 1.13
TMC6-213ENST00000589933 FOXJ1Q92949 421 aa22.1■■□□□ 1.13
TMC6-213ENST00000589933 SMARCE1Q969G3 411 aa22.1■■□□□ 1.13
TMC6-213ENST00000589933 PLD4Q96BZ4 506 aa22.1■■□□□ 1.13
TMC6-213ENST00000589933 TMEM74BQ9NUR3 256 aa22.1■■□□□ 1.13
TMC6-213ENST00000589933 ARMCX3Q9UH62 379 aaPredicted RBP22.1■■□□□ 1.13
TMC6-213ENST00000589933 FBXO10Q9UK96 956 aa22.1■■□□□ 1.13
TMC6-213ENST00000589933 CYP8B1Q9UNU6 501 aa22.1■■□□□ 1.13
TMC6-213ENST00000589933 ATXN2Q99700 1313 aaKnown RBP22.09■■□□□ 1.13
TMC6-213ENST00000589933 PENKP01210 267 aaPredicted RBP22.09■■□□□ 1.13
TMC6-213ENST00000589933 SYPP08247 313 aa22.09■■□□□ 1.13
TMC6-213ENST00000589933 CD19P15391 556 aa22.09■■□□□ 1.13
TMC6-213ENST00000589933 HARS2P49590 506 aaKnown RBP22.09■■□□□ 1.13
TMC6-213ENST00000589933 ARID5AQ03989 594 aa22.09■■□□□ 1.13
TMC6-213ENST00000589933 LRRC63Q05C16 580 aa22.09■■□□□ 1.13
TMC6-213ENST00000589933 BST2Q10589 180 aaKnown RBP22.09■■□□□ 1.13
TMC6-213ENST00000589933 CUL2Q13617 745 aa22.09■■□□□ 1.13
TMC6-213ENST00000589933 BECN1Q14457 450 aa22.09■■□□□ 1.13
TMC6-213ENST00000589933 RAB41Q5JT25 222 aa22.09■■□□□ 1.13
TMC6-213ENST00000589933 PEAR1Q5VY43 1037 aaPredicted RBP22.09■■□□□ 1.13
TMC6-213ENST00000589933 KIAA1324Q6UXG2 1013 aaKnown RBP22.09■■□□□ 1.13
TMC6-213ENST00000589933 DENND1CQ8IV53 801 aa22.09■■□□□ 1.13
TMC6-213ENST00000589933 CPXM2Q8N436 756 aa22.09■■□□□ 1.13
TMC6-213ENST00000589933 DDI1Q8WTU0 396 aa22.09■■□□□ 1.13
TMC6-213ENST00000589933 TATDN2Q93075 761 aa22.09■■□□□ 1.13
TMC6-213ENST00000589933 METTL14Q9HCE5 456 aaKnown RBP22.09■■□□□ 1.13
TMC6-213ENST00000589933 CACNA2D2Q9NY47 1150 aa22.09■■□□□ 1.13
TMC6-213ENST00000589933 SUSD2Q9UGT4 822 aa22.09■■□□□ 1.13
TMC6-213ENST00000589933 KIAA1257Q9ULG3 409 aa22.09■■□□□ 1.13
TMC6-213ENST00000589933 COQ4Q9Y3A0 265 aa22.09■■□□□ 1.13
TMC6-213ENST00000589933 PCNX2A6NKB5 2137 aa22.09■■□□□ 1.13
TMC6-213ENST00000589933 MAP1BP46821 2468 aaKnown RBP22.08■■□□□ 1.13
TMC6-213ENST00000589933 IGHV1OR15-9A0A0B4J2B8 117 aa22.08■■□□□ 1.13
TMC6-213ENST00000589933 XPO1O14980 1071 aaKnown RBP22.08■■□□□ 1.13
TMC6-213ENST00000589933 SYNCRIPO60506 623 aaKnown RBP22.08■■□□□ 1.13
TMC6-213ENST00000589933 KLKB1P03952 638 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms