RNA–Protein interactions for RNA: ENST00000589901.2

MBD3-206, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 740 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-206ENST00000589901 RAD23BP54727 409 aa17.11■□□□□ 0.33
MBD3-206ENST00000589901 MCCD1P59942 119 aaPredicted RBP17.11■□□□□ 0.33
MBD3-206ENST00000589901 EFEMP1Q12805 493 aa17.11■□□□□ 0.33
MBD3-206ENST00000589901 FOXC1Q12948 553 aa17.11■□□□□ 0.33
MBD3-206ENST00000589901 PEAR1Q5VY43 1037 aaPredicted RBP17.11■□□□□ 0.33
MBD3-206ENST00000589901 SLC23A3Q6PIS1 610 aa17.11■□□□□ 0.33
MBD3-206ENST00000589901 SLC36A4Q6YBV0 504 aa17.11■□□□□ 0.33
MBD3-206ENST00000589901 TADA2BQ86TJ2 420 aa17.11■□□□□ 0.33
MBD3-206ENST00000589901 ZNF276Q8N554 614 aa17.11■□□□□ 0.33
MBD3-206ENST00000589901 DEFB124Q8NES8 71 aa17.11■□□□□ 0.33
MBD3-206ENST00000589901 SCAND2PQ9GZW5 306 aaPredicted RBP17.11■□□□□ 0.33
MBD3-206ENST00000589901 GDPD2Q9HCC8 539 aa17.11■□□□□ 0.33
MBD3-206ENST00000589901 CD93Q9NPY3 652 aa17.11■□□□□ 0.33
MBD3-206ENST00000589901 CISHQ9NSE2 258 aa17.11■□□□□ 0.33
MBD3-206ENST00000589901 RAB20Q9NX57 234 aa17.11■□□□□ 0.33
MBD3-206ENST00000589901 CLIC5Q9NZA1 410 aa17.11■□□□□ 0.33
MBD3-206ENST00000589901 CYP8B1Q9UNU6 501 aa17.11■□□□□ 0.33
MBD3-206ENST00000589901 ZBTB24O43167 697 aaPredicted RBP17.1■□□□□ 0.33
MBD3-206ENST00000589901 TOP3BO95985 862 aaKnown RBP17.1■□□□□ 0.33
MBD3-206ENST00000589901 ZNF33AQ06730 810 aa17.1■□□□□ 0.33
MBD3-206ENST00000589901 EDRF1Q3B7T1 1238 aa17.1■□□□□ 0.33
MBD3-206ENST00000589901 SLC41A1Q8IVJ1 513 aa17.1■□□□□ 0.33
MBD3-206ENST00000589901 FBXL13Q8NEE6 735 aa17.1■□□□□ 0.33
MBD3-206ENST00000589901 TATDN2Q93075 761 aa17.1■□□□□ 0.33
MBD3-206ENST00000589901 TMEM176AQ96HP8 235 aa17.1■□□□□ 0.33
MBD3-206ENST00000589901 MRGPRX1Q96LB2 322 aa17.1■□□□□ 0.33
MBD3-206ENST00000589901 DNAI2Q9GZS0 605 aa17.1■□□□□ 0.33
MBD3-206ENST00000589901 FBXO10Q9UK96 956 aa17.1■□□□□ 0.33
MBD3-206ENST00000589901 WASF3Q9UPY6 502 aa17.1■□□□□ 0.33
MBD3-206ENST00000589901 ZNF217O75362 1048 aa17.09■□□□□ 0.33
MBD3-206ENST00000589901 PENKP01210 267 aaPredicted RBP17.09■□□□□ 0.33
MBD3-206ENST00000589901 CORO1AP31146 461 aaKnown RBP17.09■□□□□ 0.33
MBD3-206ENST00000589901 HOXD12P35452 270 aa17.09■□□□□ 0.33
MBD3-206ENST00000589901 DPP6P42658 865 aa17.09■□□□□ 0.33
MBD3-206ENST00000589901 COG7P83436 770 aa17.09■□□□□ 0.33
MBD3-206ENST00000589901 DUOXA1Q1HG43 343 aa17.09■□□□□ 0.33
MBD3-206ENST00000589901 FYB2Q5VWT5 728 aa17.09■□□□□ 0.33
MBD3-206ENST00000589901 PIGZQ86VD9 579 aa17.09■□□□□ 0.33
MBD3-206ENST00000589901 CDK5RAP1Q96SZ6 601 aaKnown RBP17.09■□□□□ 0.33
MBD3-206ENST00000589901 GTPBP2Q9BX10 602 aaKnown RBP17.09■□□□□ 0.33
MBD3-206ENST00000589901 AGO1Q9UL18 857 aaKnown RBP17.09■□□□□ 0.33
MBD3-206ENST00000589901 SLC6A14Q9UN76 642 aa17.09■□□□□ 0.33
MBD3-206ENST00000589901 MYO18AQ92614 2054 aaKnown RBP17.09■□□□□ 0.33
MBD3-206ENST00000589901 GON4LQ3T8J9 2241 aa17.09■□□□□ 0.33
MBD3-206ENST00000589901 AKAP13Q12802 2813 aa17.09■□□□□ 0.33
MBD3-206ENST00000589901 C1QTNF9BB2RNN3 333 aa17.08■□□□□ 0.32
MBD3-206ENST00000589901 TULP2O00295 520 aa17.08■□□□□ 0.32
MBD3-206ENST00000589901 GFRA2O00451 464 aa17.08■□□□□ 0.32
MBD3-206ENST00000589901 CETN3O15182 167 aa17.08■□□□□ 0.32
MBD3-206ENST00000589901 C1QTNF9P0C862 333 aa17.08■□□□□ 0.32
MBD3-206ENST00000589901 EPB41P11171 864 aaKnown RBP17.08■□□□□ 0.32
MBD3-206ENST00000589901 MFAP3P55082 362 aa17.08■□□□□ 0.32
MBD3-206ENST00000589901 GFPT1Q06210 699 aaPredicted RBP17.08■□□□□ 0.32
MBD3-206ENST00000589901 PNOCQ13519 176 aa17.08■□□□□ 0.32
MBD3-206ENST00000589901 GEN1Q17RS7 908 aa17.08■□□□□ 0.32
MBD3-206ENST00000589901 CBWD6Q4V339 395 aa17.08■□□□□ 0.32
MBD3-206ENST00000589901 RAB41Q5JT25 222 aa17.08■□□□□ 0.32
MBD3-206ENST00000589901 CBWD3Q5JTY5 395 aa17.08■□□□□ 0.32
MBD3-206ENST00000589901 CBWD5Q5RIA9 395 aa17.08■□□□□ 0.32
MBD3-206ENST00000589901 ARHGAP17Q68EM7 881 aa17.08■□□□□ 0.32
MBD3-206ENST00000589901 DENND1CQ8IV53 801 aa17.08■□□□□ 0.32
MBD3-206ENST00000589901 TTC39CQ8N584 583 aa17.08■□□□□ 0.32
MBD3-206ENST00000589901 TRIML1Q8N9V2 468 aa17.08■□□□□ 0.32
MBD3-206ENST00000589901 CEP76Q8TAP6 659 aa17.08■□□□□ 0.32
MBD3-206ENST00000589901 NDRG1Q92597 394 aaKnown RBP17.08■□□□□ 0.32
MBD3-206ENST00000589901 FAXDC2Q96IV6 333 aa17.08■□□□□ 0.32
MBD3-206ENST00000589901 HSPA12BQ96MM6 686 aa17.08■□□□□ 0.32
MBD3-206ENST00000589901 UBXN6Q9BZV1 441 aa17.08■□□□□ 0.32
MBD3-206ENST00000589901 CAPN10Q9HC96 672 aa17.08■□□□□ 0.32
MBD3-206ENST00000589901 MARCH2Q9P0N8 246 aa17.08■□□□□ 0.32
MBD3-206ENST00000589901 ZNF510Q9Y2H8 683 aa17.08■□□□□ 0.32
MBD3-206ENST00000589901 SLC27A6Q9Y2P4 619 aa17.08■□□□□ 0.32
MBD3-206ENST00000589901 STON1Q9Y6Q2 735 aa17.08■□□□□ 0.32
MBD3-206ENST00000589901 MYH10P35580 1976 aa17.08■□□□□ 0.32
MBD3-206ENST00000589901 SLC12A8A0AV02 714 aa17.07■□□□□ 0.32
MBD3-206ENST00000589901 STX10O60499 249 aa17.07■□□□□ 0.32
MBD3-206ENST00000589901 SERPINF2P08697 491 aa17.07■□□□□ 0.32
MBD3-206ENST00000589901 CHKAP35790 457 aa17.07■□□□□ 0.32
MBD3-206ENST00000589901 PRCPP42785 496 aa17.07■□□□□ 0.32
MBD3-206ENST00000589901 TKTL1P51854 596 aa17.07■□□□□ 0.32
MBD3-206ENST00000589901 ATXN3P54252 364 aaPredicted RBP17.07■□□□□ 0.32
MBD3-206ENST00000589901 YWHAGP61981 247 aaKnown RBP eCLIP17.07■□□□□ 0.32
MBD3-206ENST00000589901 FUT11Q495W5 492 aa17.07■□□□□ 0.32
MBD3-206ENST00000589901 DCAF17Q5H9S7 520 aaPredicted RBP17.07■□□□□ 0.32
MBD3-206ENST00000589901 KIAA1324Q6UXG2 1013 aaKnown RBP17.07■□□□□ 0.32
MBD3-206ENST00000589901 RSRC2Q7L4I2 434 aaKnown RBP17.07■□□□□ 0.32
MBD3-206ENST00000589901 ANKRD52Q8NB46 1076 aa17.07■□□□□ 0.32
MBD3-206ENST00000589901 OR2I1PQ8NGU4 316 aa17.07■□□□□ 0.32
MBD3-206ENST00000589901 DCLK3Q9C098 648 aa17.07■□□□□ 0.32
MBD3-206ENST00000589901 CLEC4EQ9ULY5 219 aa17.07■□□□□ 0.32
MBD3-206ENST00000589901 TNRC6BQ9UPQ9 1833 aaKnown RBP17.07■□□□□ 0.32
MBD3-206ENST00000589901 PLXND1Q9Y4D7 1925 aa17.06■□□□□ 0.32
MBD3-206ENST00000589901 ZBED1O96006 694 aa17.06■□□□□ 0.32
MBD3-206ENST00000589901 PROS1P07225 676 aa17.06■□□□□ 0.32
MBD3-206ENST00000589901 IL12RB1P42701 662 aa17.06■□□□□ 0.32
MBD3-206ENST00000589901 PMS1P54277 932 aaKnown RBP17.06■□□□□ 0.32
MBD3-206ENST00000589901 SEMA3BQ13214 749 aa17.06■□□□□ 0.32
MBD3-206ENST00000589901 GOLGA7BQ2TAP0 167 aa17.06■□□□□ 0.32
MBD3-206ENST00000589901 TCERG1LQ5VWI1 586 aa17.06■□□□□ 0.32
MBD3-206ENST00000589901 UNQ6494/PRO21346Q6UXR6 183 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms