RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	DAOA	P59103	153 aa		16.02	■□□□□ 0.15
DDX39A-209	ENST00000589318	LRRC26	Q2I0M4	334 aa		16.02	■□□□□ 0.15
DDX39A-209	ENST00000589318	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	16.02	■□□□□ 0.15	1e-6	■■■■□ 20.8
DDX39A-209	ENST00000589318	HFE2	Q6ZVN8	426 aa		16.02	■□□□□ 0.15
DDX39A-209	ENST00000589318	BNIPL	Q7Z465	357 aa		16.02	■□□□□ 0.15
DDX39A-209	ENST00000589318	SIX6OS1	Q8N1H7	587 aa		16.02	■□□□□ 0.15
DDX39A-209	ENST00000589318	MICAL1	Q8TDZ2	1067 aa		16.02	■□□□□ 0.15
DDX39A-209	ENST00000589318	HSPH1	Q92598	858 aa		16.02	■□□□□ 0.15
DDX39A-209	ENST00000589318	NT5C3B	Q969T7	300 aa		16.02	■□□□□ 0.15
DDX39A-209	ENST00000589318	SLC2A13	Q96QE2	648 aa		16.02	■□□□□ 0.15
DDX39A-209	ENST00000589318	DPH5	Q9H2P9	285 aa		16.02	■□□□□ 0.15
DDX39A-209	ENST00000589318	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	16.02	■□□□□ 0.15	2e-7	■■■□□ 15.3
DDX39A-209	ENST00000589318	BAIAP2L1	Q9UHR4	511 aa		16.02	■□□□□ 0.15
DDX39A-209	ENST00000589318	ADAM28	Q9UKQ2	775 aa		16.02	■□□□□ 0.15
DDX39A-209	ENST00000589318	SLC12A4	Q9UP95	1085 aa		16.02	■□□□□ 0.15
DDX39A-209	ENST00000589318	HOXA2	O43364	376 aa		16.01	■□□□□ 0.15
DDX39A-209	ENST00000589318	PRPSAP2	O60256	369 aa		16.01	■□□□□ 0.15
DDX39A-209	ENST00000589318	FYN	P06241	537 aa		16.01	■□□□□ 0.15
DDX39A-209	ENST00000589318	BCAR1	P56945	870 aa		16.01	■□□□□ 0.15
DDX39A-209	ENST00000589318	YWHAZ	P63104	245 aa	Known RBP	16.01	■□□□□ 0.15
DDX39A-209	ENST00000589318	TSPY1	Q01534	308 aa		16.01	■□□□□ 0.15
DDX39A-209	ENST00000589318	MAPRE1	Q15691	268 aa	Known RBP	16.01	■□□□□ 0.15
DDX39A-209	ENST00000589318	HIBCH	Q6NVY1	386 aa	Predicted RBP	16.01	■□□□□ 0.15
DDX39A-209	ENST00000589318	DEFB106A	Q8N104	65 aa		16.01	■□□□□ 0.15
DDX39A-209	ENST00000589318	TEKT4	Q8WW24	435 aa		16.01	■□□□□ 0.15
DDX39A-209	ENST00000589318	FAM149B1	Q96BN6	582 aa		16.01	■□□□□ 0.15
DDX39A-209	ENST00000589318	PAWR	Q96IZ0	340 aa	Known RBP	16.01	■□□□□ 0.15
DDX39A-209	ENST00000589318	TBCB	Q99426	244 aa		16.01	■□□□□ 0.15
DDX39A-209	ENST00000589318	GPR62	Q9BZJ7	368 aa		16.01	■□□□□ 0.15
DDX39A-209	ENST00000589318	TRIM31	Q9BZY9	425 aa		16.01	■□□□□ 0.15
DDX39A-209	ENST00000589318	KIF9	Q9HAQ2	790 aa		16.01	■□□□□ 0.15
DDX39A-209	ENST00000589318	CNGB3	Q9NQW8	809 aa		16.01	■□□□□ 0.15
DDX39A-209	ENST00000589318	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	16.01	■□□□□ 0.15
DDX39A-209	ENST00000589318	GRHL1	Q9NZI5	618 aa		16.01	■□□□□ 0.15
DDX39A-209	ENST00000589318	NEU2	Q9Y3R4	380 aa		16.01	■□□□□ 0.15
DDX39A-209	ENST00000589318	SYN3	O14994	580 aa		16	■□□□□ 0.15
DDX39A-209	ENST00000589318	TADA2A	O75478	443 aa		16	■□□□□ 0.15
DDX39A-209	ENST00000589318	FBXO21	O94952	628 aa		16	■□□□□ 0.15
DDX39A-209	ENST00000589318	ANP32D	O95626	131 aa		16	■□□□□ 0.15
DDX39A-209	ENST00000589318	ECEL1	O95672	775 aa		16	■□□□□ 0.15
DDX39A-209	ENST00000589318	CLTB	P09497	229 aa		16	■□□□□ 0.15
DDX39A-209	ENST00000589318	OR4Q2	P0C623	313 aa		16	■□□□□ 0.15
DDX39A-209	ENST00000589318	CCNG1	P51959	295 aa		16	■□□□□ 0.15
DDX39A-209	ENST00000589318	PITX1	P78337	314 aa	Predicted RBP	16	■□□□□ 0.15
DDX39A-209	ENST00000589318	MRPL58	Q14197	206 aa	Known RBP	16	■□□□□ 0.15
DDX39A-209	ENST00000589318	PPP1R7	Q15435	360 aa		16	■□□□□ 0.15
DDX39A-209	ENST00000589318	ODF2	Q5BJF6	829 aa		16	■□□□□ 0.15
DDX39A-209	ENST00000589318	BBS12	Q6ZW61	710 aa		16	■□□□□ 0.15
DDX39A-209	ENST00000589318	KCTD6	Q8NC69	237 aa		16	■□□□□ 0.15
DDX39A-209	ENST00000589318	CHMP6	Q96FZ7	201 aa		16	■□□□□ 0.15
DDX39A-209	ENST00000589318	SNRNP25	Q9BV90	132 aa	Known RBP	16	■□□□□ 0.15
DDX39A-209	ENST00000589318	MRPL9	Q9BYD2	267 aa	Known RBP	16	■□□□□ 0.15
DDX39A-209	ENST00000589318	ZCWPW1	Q9H0M4	648 aa		16	■□□□□ 0.15
DDX39A-209	ENST00000589318	DMAP1	Q9NPF5	467 aa	Predicted RBP	16	■□□□□ 0.15
DDX39A-209	ENST00000589318	FAM114A2	Q9NRY5	505 aa		16	■□□□□ 0.15
DDX39A-209	ENST00000589318	TMEM39A	Q9NV64	488 aa		16	■□□□□ 0.15
DDX39A-209	ENST00000589318	RASAL2	Q9UJF2	1139 aa		16	■□□□□ 0.15
DDX39A-209	ENST00000589318	YJEFN3	A6XGL0	299 aa		16	■□□□□ 0.15
DDX39A-209	ENST00000589318	TBKBP1	A7MCY6	615 aa		16	■□□□□ 0.15
DDX39A-209	ENST00000589318		E7ENQ6	273 aa		16	■□□□□ 0.15
DDX39A-209	ENST00000589318	MDM4	O15151	490 aa		16	■□□□□ 0.15
DDX39A-209	ENST00000589318	LIAS	O43766	372 aa		16	■□□□□ 0.15
DDX39A-209	ENST00000589318	GALT	P07902	379 aa		16	■□□□□ 0.15
DDX39A-209	ENST00000589318	DRD4	P21917	467 aa		16	■□□□□ 0.15
DDX39A-209	ENST00000589318	IL4R	P24394	825 aa		16	■□□□□ 0.15
DDX39A-209	ENST00000589318	ITGB8	P26012	769 aa		16	■□□□□ 0.15
DDX39A-209	ENST00000589318	HPD	P32754	393 aa	Predicted RBP	16	■□□□□ 0.15
DDX39A-209	ENST00000589318	RPL21	P46778	160 aa	Known RBP	16	■□□□□ 0.15
DDX39A-209	ENST00000589318	LBX1	P52954	281 aa		16	■□□□□ 0.15
DDX39A-209	ENST00000589318	EIF3B	P55884	814 aa	Known RBP	16	■□□□□ 0.15
DDX39A-209	ENST00000589318	MMRN1	Q13201	1228 aa		16	■□□□□ 0.15
DDX39A-209	ENST00000589318	BYSL	Q13895	437 aa	Known RBP	16	■□□□□ 0.15
DDX39A-209	ENST00000589318	DPYSL3	Q14195	570 aa		16	■□□□□ 0.15
DDX39A-209	ENST00000589318	CA9	Q16790	459 aa		16	■□□□□ 0.15
DDX39A-209	ENST00000589318	SLC25A52	Q3SY17	297 aa		16	■□□□□ 0.15
DDX39A-209	ENST00000589318	BOLA3	Q53S33	107 aa		16	■□□□□ 0.15
DDX39A-209	ENST00000589318	ZC3H12A	Q5D1E8	599 aa	Known RBP	16	■□□□□ 0.15
DDX39A-209	ENST00000589318	VARS2	Q5ST30	1063 aa	Known RBP	16	■□□□□ 0.15
DDX39A-209	ENST00000589318	SYPL2	Q5VXT5	272 aa		16	■□□□□ 0.15
DDX39A-209	ENST00000589318	SCYL2	Q6P3W7	929 aa		16	■□□□□ 0.15
DDX39A-209	ENST00000589318	CNKSR3	Q6P9H4	555 aa		16	■□□□□ 0.15
DDX39A-209	ENST00000589318	DRICH1	Q6PGQ1	229 aa	Predicted RBP	16	■□□□□ 0.15
DDX39A-209	ENST00000589318	ZDHHC24	Q6UX98	284 aa		16	■□□□□ 0.15
DDX39A-209	ENST00000589318	STRADA	Q7RTN6	431 aa		16	■□□□□ 0.15
DDX39A-209	ENST00000589318	TMEM173	Q86WV6	379 aa	Predicted RBP	16	■□□□□ 0.15
DDX39A-209	ENST00000589318	MFN1	Q8IWA4	741 aa		16	■□□□□ 0.15
DDX39A-209	ENST00000589318	ATL2	Q8NHH9	583 aa		16	■□□□□ 0.15
DDX39A-209	ENST00000589318	NPY6R	Q99463	290 aa		16	■□□□□ 0.15
DDX39A-209	ENST00000589318	C11orf49	Q9H6J7	331 aa		16	■□□□□ 0.15
DDX39A-209	ENST00000589318	PNPLA8	Q9NP80	782 aa		16	■□□□□ 0.15
DDX39A-209	ENST00000589318	ZDHHC18	Q9NUE0	388 aa		16	■□□□□ 0.15
DDX39A-209	ENST00000589318	GPATCH2L	Q9NWQ4	482 aa		16	■□□□□ 0.15
DDX39A-209	ENST00000589318		H0YGN5	161 aa		15.99	■□□□□ 0.15
DDX39A-209	ENST00000589318	ALDH2	P05091	517 aa		15.99	■□□□□ 0.15
DDX39A-209	ENST00000589318	USP17L7	P0C7H9	530 aa		15.99	■□□□□ 0.15
DDX39A-209	ENST00000589318	NOS2	P35228	1153 aa		15.99	■□□□□ 0.15
DDX39A-209	ENST00000589318	PBX3	P40426	434 aa		15.99	■□□□□ 0.15
DDX39A-209	ENST00000589318	CDH6	P55285	790 aa		15.99	■□□□□ 0.15
DDX39A-209	ENST00000589318	KRT17	Q04695	432 aa		15.99	■□□□□ 0.15
DDX39A-209	ENST00000589318	HLTF	Q14527	1009 aa	Known RBP eCLIP	15.99	■□□□□ 0.15

Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms