RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 SYCP1Q15431 976 aa20.08■□□□□ 0.81
CIRBP-217ENST00000588230 SKOR2Q2VWA4 1001 aaPredicted RBP20.08■□□□□ 0.81
CIRBP-217ENST00000588230 ANO4Q32M45 955 aa20.08■□□□□ 0.81
CIRBP-217ENST00000588230 TMEM25Q86YD3 366 aa20.08■□□□□ 0.81
CIRBP-217ENST00000588230 PASD1Q8IV76 773 aa20.08■□□□□ 0.81
CIRBP-217ENST00000588230 DHX40Q8IX18 779 aaKnown RBP20.08■□□□□ 0.81
CIRBP-217ENST00000588230 CLEC4CQ8WTT0 213 aa20.08■□□□□ 0.81
CIRBP-217ENST00000588230 NOX5Q96PH1 765 aa20.08■□□□□ 0.81
CIRBP-217ENST00000588230 FUCA2Q9BTY2 467 aa20.08■□□□□ 0.81
CIRBP-217ENST00000588230 FAM126AQ9BYI3 521 aaPredicted RBP20.08■□□□□ 0.81
CIRBP-217ENST00000588230 GANQ9H2C0 597 aa20.08■□□□□ 0.81
CIRBP-217ENST00000588230 LHX5Q9H2C1 402 aa20.08■□□□□ 0.81
CIRBP-217ENST00000588230 PDCL3Q9H2J4 239 aa20.08■□□□□ 0.81
CIRBP-217ENST00000588230 SPHK2Q9NRA0 654 aa20.08■□□□□ 0.81
CIRBP-217ENST00000588230 CYTH4Q9UIA0 394 aa20.08■□□□□ 0.81
CIRBP-217ENST00000588230 ZNF510Q9Y2H8 683 aa20.08■□□□□ 0.81
CIRBP-217ENST00000588230 CXCL12P48061 93 aa20.07■□□□□ 0.8
CIRBP-217ENST00000588230 POLR2FP61218 127 aaKnown RBP20.07■□□□□ 0.8
CIRBP-217ENST00000588230 DMWDQ09019 674 aa20.07■□□□□ 0.8
CIRBP-217ENST00000588230 PDCLQ13371 301 aa20.07■□□□□ 0.8
CIRBP-217ENST00000588230 PPP2R5DQ14738 602 aa20.07■□□□□ 0.8
CIRBP-217ENST00000588230 FBXO43Q4G163 708 aa20.07■□□□□ 0.8
CIRBP-217ENST00000588230 Q6ZNB5 142 aa20.07■□□□□ 0.8
CIRBP-217ENST00000588230 TMEM110Q86TL2 294 aa20.07■□□□□ 0.8
CIRBP-217ENST00000588230 FMNL3Q8IVF7 1028 aa20.07■□□□□ 0.8
CIRBP-217ENST00000588230 FAM149B1Q96BN6 582 aa20.07■□□□□ 0.8
CIRBP-217ENST00000588230 SFMBT1Q9UHJ3 866 aa20.07■□□□□ 0.8
CIRBP-217ENST00000588230 SIK3Q9Y2K2 1263 aa20.07■□□□□ 0.8
CIRBP-217ENST00000588230 CEP83Q9Y592 693 aa20.07■□□□□ 0.8
CIRBP-217ENST00000588230 KIAA1549LQ6ZVL6 1849 aa20.06■□□□□ 0.8
CIRBP-217ENST00000588230 E5RJQ4 531 aa20.06■□□□□ 0.8
CIRBP-217ENST00000588230 F8VZ95 297 aa20.06■□□□□ 0.8
CIRBP-217ENST00000588230 KLKB1P03952 638 aa20.06■□□□□ 0.8
CIRBP-217ENST00000588230 CYP11B1P15538 503 aa20.06■□□□□ 0.8
CIRBP-217ENST00000588230 CORO1AP31146 461 aaKnown RBP20.06■□□□□ 0.8
CIRBP-217ENST00000588230 EIF2DP41214 584 aaKnown RBP20.06■□□□□ 0.8
CIRBP-217ENST00000588230 SLC6A11P48066 632 aa20.06■□□□□ 0.8
CIRBP-217ENST00000588230 APTXQ7Z2E3 356 aaKnown RBP20.06■□□□□ 0.8
CIRBP-217ENST00000588230 WDTC1Q8N5D0 677 aa20.06■□□□□ 0.8
CIRBP-217ENST00000588230 NEK11Q8NG66 645 aa20.06■□□□□ 0.8
CIRBP-217ENST00000588230 PLD4Q96BZ4 506 aa20.06■□□□□ 0.8
CIRBP-217ENST00000588230 PPP1R13BQ96KQ4 1090 aa20.06■□□□□ 0.8
CIRBP-217ENST00000588230 PNKPQ96T60 521 aa20.06■□□□□ 0.8
CIRBP-217ENST00000588230 EPC1Q9H2F5 836 aa20.06■□□□□ 0.8
CIRBP-217ENST00000588230 NLRC4Q9NPP4 1024 aa20.06■□□□□ 0.8
CIRBP-217ENST00000588230 WDR35Q9P2L0 1181 aa20.06■□□□□ 0.8
CIRBP-217ENST00000588230 HBS1LQ9Y450 684 aaKnown RBP20.06■□□□□ 0.8
CIRBP-217ENST00000588230 DAAM1Q9Y4D1 1078 aa20.06■□□□□ 0.8
CIRBP-217ENST00000588230 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.05■□□□□ 0.8
CIRBP-217ENST00000588230 HOXC11O43248 304 aaPredicted RBP20.05■□□□□ 0.8
CIRBP-217ENST00000588230 PAPSS1O43252 624 aaPredicted RBP20.05■□□□□ 0.8
CIRBP-217ENST00000588230 ATG13O75143 517 aa20.05■□□□□ 0.8
CIRBP-217ENST00000588230 RNF40O75150 1001 aa20.05■□□□□ 0.8
CIRBP-217ENST00000588230 NCAM1P13591 858 aa20.05■□□□□ 0.8
CIRBP-217ENST00000588230 HARS2P49590 506 aaKnown RBP20.05■□□□□ 0.8
CIRBP-217ENST00000588230 SNX16P57768 344 aa20.05■□□□□ 0.8
CIRBP-217ENST00000588230 MSANTD2Q6P1R3 559 aa20.05■□□□□ 0.8
CIRBP-217ENST00000588230 TPGS1Q6ZTW0 290 aa20.05■□□□□ 0.8
CIRBP-217ENST00000588230 DENND1CQ8IV53 801 aa20.05■□□□□ 0.8
CIRBP-217ENST00000588230 NAT16Q8N8M0 369 aa20.05■□□□□ 0.8
CIRBP-217ENST00000588230 C1orf131Q8NDD1 294 aaKnown RBP20.05■□□□□ 0.8
CIRBP-217ENST00000588230 CCDC26Q8TAB7 109 aa20.05■□□□□ 0.8
CIRBP-217ENST00000588230 ATRIPQ8WXE1 791 aa20.05■□□□□ 0.8
CIRBP-217ENST00000588230 SPAG5Q96R06 1193 aa20.05■□□□□ 0.8
CIRBP-217ENST00000588230 ERGIC2Q96RQ1 377 aa20.05■□□□□ 0.8
CIRBP-217ENST00000588230 TRIM62Q9BVG3 475 aa20.05■□□□□ 0.8
CIRBP-217ENST00000588230 BBS2Q9BXC9 721 aa20.05■□□□□ 0.8
CIRBP-217ENST00000588230 CAPN9O14815 690 aa20.04■□□□□ 0.8
CIRBP-217ENST00000588230 EPHB6O15197 1021 aa20.04■□□□□ 0.8
CIRBP-217ENST00000588230 APODP05090 189 aa20.04■□□□□ 0.8
CIRBP-217ENST00000588230 CHKAP35790 457 aa20.04■□□□□ 0.8
CIRBP-217ENST00000588230 TRIP4Q15650 581 aaPredicted RBP20.04■□□□□ 0.8
CIRBP-217ENST00000588230 FILIP1LQ4L180 1135 aa20.04■□□□□ 0.8
CIRBP-217ENST00000588230 TAF3Q5VWG9 929 aa20.04■□□□□ 0.8
CIRBP-217ENST00000588230 C12orf40Q86WS4 652 aa20.04■□□□□ 0.8
CIRBP-217ENST00000588230 TMEM35BQ8NCS4 154 aa20.04■□□□□ 0.8
CIRBP-217ENST00000588230 IPO4Q8TEX9 1081 aaKnown RBP20.04■□□□□ 0.8
CIRBP-217ENST00000588230 CPXM1Q96SM3 734 aa20.04■□□□□ 0.8
CIRBP-217ENST00000588230 SYNCQ9H7C4 482 aa20.04■□□□□ 0.8
CIRBP-217ENST00000588230 ARHGEF4Q9NR80 690 aa20.04■□□□□ 0.8
CIRBP-217ENST00000588230 DEC1Q9P2X7 70 aa20.04■□□□□ 0.8
CIRBP-217ENST00000588230 AGO1Q9UL18 857 aaKnown RBP20.04■□□□□ 0.8
CIRBP-217ENST00000588230 DNAH14Q0VDD8 3507 aa20.03■□□□□ 0.8
CIRBP-217ENST00000588230 CHURC1-FNTBB4DL54 471 aa20.03■□□□□ 0.8
CIRBP-217ENST00000588230 NEDD8-MDP1E9PL57 170 aa20.03■□□□□ 0.8
CIRBP-217ENST00000588230 MSI1O43347 362 aaKnown RBP20.03■□□□□ 0.8
CIRBP-217ENST00000588230 TULP3O75386 442 aa20.03■□□□□ 0.8
CIRBP-217ENST00000588230 GFPT2O94808 682 aa20.03■□□□□ 0.8
CIRBP-217ENST00000588230 CHRM1P11229 460 aaPredicted RBP20.03■□□□□ 0.8
CIRBP-217ENST00000588230 HOXA6P31267 233 aa20.03■□□□□ 0.8
CIRBP-217ENST00000588230 SOX5P35711 763 aa20.03■□□□□ 0.8
CIRBP-217ENST00000588230 STAT1P42224 750 aa20.03■□□□□ 0.8
CIRBP-217ENST00000588230 NRLP54845 237 aa20.03■□□□□ 0.8
CIRBP-217ENST00000588230 YWHAZP63104 245 aaKnown RBP20.03■□□□□ 0.8
CIRBP-217ENST00000588230 TPM4P67936 248 aa20.03■□□□□ 0.8
CIRBP-217ENST00000588230 KDSRQ06136 332 aa20.03■□□□□ 0.8
CIRBP-217ENST00000588230 MESP2Q0VG99 397 aa20.03■□□□□ 0.8
CIRBP-217ENST00000588230 IQCB1Q15051 598 aa20.03■□□□□ 0.8
CIRBP-217ENST00000588230 PREPLQ4J6C6 727 aaPredicted RBP20.03■□□□□ 0.8
CIRBP-217ENST00000588230 XPO6Q96QU8 1125 aaKnown RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms