RNA–Protein interactions for RNA: ENST00000587605.5

MBD1-216, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 2 BASIC

Gene MBD1, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-216ENST00000587605 SCUBE3Q8IX30 993 aa20.53■□□□□ 0.88
MBD1-216ENST00000587605 ANKRD52Q8NB46 1076 aa20.53■□□□□ 0.88
MBD1-216ENST00000587605 CCDC110Q8TBZ0 833 aa20.53■□□□□ 0.88
MBD1-216ENST00000587605 C12orf65Q9H3J6 166 aaKnown RBP20.53■□□□□ 0.88
MBD1-216ENST00000587605 MMADHCQ9H3L0 296 aaPredicted RBP20.53■□□□□ 0.88
MBD1-216ENST00000587605 TUT1Q9H6E5 874 aaKnown RBP20.53■□□□□ 0.88
MBD1-216ENST00000587605 PCDHA11Q9Y5I1 949 aa20.53■□□□□ 0.88
MBD1-216ENST00000587605 NPTXRO95502 500 aa20.52■□□□□ 0.88
MBD1-216ENST00000587605 ZNF286BP0CG31 522 aa20.52■□□□□ 0.88
MBD1-216ENST00000587605 HOXD8P13378 290 aaPredicted RBP20.52■□□□□ 0.88
MBD1-216ENST00000587605 NAB1Q13506 487 aa20.52■□□□□ 0.88
MBD1-216ENST00000587605 TTLL12Q14166 644 aaPredicted RBP20.52■□□□□ 0.88
MBD1-216ENST00000587605 PPP6R3Q5H9R7 873 aaPredicted RBP20.52■□□□□ 0.88
MBD1-216ENST00000587605 STXBP5Q5T5C0 1151 aa20.52■□□□□ 0.88
MBD1-216ENST00000587605 STRADAQ7RTN6 431 aa20.52■□□□□ 0.88
MBD1-216ENST00000587605 CDCA5Q96FF9 252 aa20.52■□□□□ 0.88
MBD1-216ENST00000587605 SIGLEC10Q96LC7 697 aa20.52■□□□□ 0.88
MBD1-216ENST00000587605 NUDCD1Q96RS6 583 aa20.52■□□□□ 0.88
MBD1-216ENST00000587605 ALG13Q9NP73 1137 aaKnown RBP20.52■□□□□ 0.88
MBD1-216ENST00000587605 SIRPGQ9P1W8 387 aa20.52■□□□□ 0.88
MBD1-216ENST00000587605 AP4E1Q9UPM8 1137 aa20.52■□□□□ 0.88
MBD1-216ENST00000587605 RRN3P2A6NIE6 340 aa20.51■□□□□ 0.87
MBD1-216ENST00000587605 RFPL1O75677 317 aa20.51■□□□□ 0.87
MBD1-216ENST00000587605 CRHR1P34998 444 aa20.51■□□□□ 0.87
MBD1-216ENST00000587605 CCNJLQ8IV13 435 aa20.51■□□□□ 0.87
MBD1-216ENST00000587605 ARHGAP24Q8N264 748 aa20.51■□□□□ 0.87
MBD1-216ENST00000587605 GPRC5AQ8NFJ5 357 aa20.51■□□□□ 0.87
MBD1-216ENST00000587605 OXNAD1Q96HP4 312 aaPredicted RBP20.51■□□□□ 0.87
MBD1-216ENST00000587605 HSFY1Q96LI6 401 aa20.51■□□□□ 0.87
MBD1-216ENST00000587605 FERMT1Q9BQL6 677 aa20.51■□□□□ 0.87
MBD1-216ENST00000587605 DHX35Q9H5Z1 703 aaKnown RBP20.51■□□□□ 0.87
MBD1-216ENST00000587605 DCLRE1BQ9H816 532 aa20.51■□□□□ 0.87
MBD1-216ENST00000587605 PLAC1Q9HBJ0 212 aa20.51■□□□□ 0.87
MBD1-216ENST00000587605 FAM49BQ9NUQ9 324 aa20.51■□□□□ 0.87
MBD1-216ENST00000587605 CXorf49A8MYA2 514 aaPredicted RBP20.51■□□□□ 0.87
MBD1-216ENST00000587605 LIN7AO14910 233 aaPredicted RBP20.51■□□□□ 0.87
MBD1-216ENST00000587605 DDNO94850 711 aaPredicted RBP20.51■□□□□ 0.87
MBD1-216ENST00000587605 TPBGLP0DKB5 382 aa20.51■□□□□ 0.87
MBD1-216ENST00000587605 SNAPC2Q13487 334 aa20.51■□□□□ 0.87
MBD1-216ENST00000587605 FAXCQ5TGI0 409 aa20.51■□□□□ 0.87
MBD1-216ENST00000587605 STEAP4Q687X5 459 aa20.51■□□□□ 0.87
MBD1-216ENST00000587605 HEATR6Q6AI08 1181 aaKnown RBP20.51■□□□□ 0.87
MBD1-216ENST00000587605 CRYBG2Q8N1P7 616 aa20.51■□□□□ 0.87
MBD1-216ENST00000587605 OR6B3Q8NGW1 331 aa20.51■□□□□ 0.87
MBD1-216ENST00000587605 E2F7Q96AV8 911 aa20.51■□□□□ 0.87
MBD1-216ENST00000587605 SIKE1Q9BRV8 207 aa20.51■□□□□ 0.87
MBD1-216ENST00000587605 EIF2B3Q9NR50 452 aaKnown RBP20.51■□□□□ 0.87
MBD1-216ENST00000587605 MORF4L1Q9UBU8 362 aa20.51■□□□□ 0.87
MBD1-216ENST00000587605 SBF1O95248 1867 aa20.5■□□□□ 0.87
MBD1-216ENST00000587605 STK10O94804 968 aaKnown RBP20.5■□□□□ 0.87
MBD1-216ENST00000587605 CD4P01730 458 aa20.5■□□□□ 0.87
MBD1-216ENST00000587605 SERPINB3P29508 390 aa20.5■□□□□ 0.87
MBD1-216ENST00000587605 GCLCP48506 637 aaPredicted RBP20.5■□□□□ 0.87
MBD1-216ENST00000587605 SYCP2LQ5T4T6 812 aa20.5■□□□□ 0.87
MBD1-216ENST00000587605 ZNF534Q76KX8 674 aa20.5■□□□□ 0.87
MBD1-216ENST00000587605 ACMSDQ8TDX5 336 aa20.5■□□□□ 0.87
MBD1-216ENST00000587605 ZNF560Q96MR9 790 aa20.5■□□□□ 0.87
MBD1-216ENST00000587605 ZNF570Q96NI8 536 aa20.5■□□□□ 0.87
MBD1-216ENST00000587605 CSPG4P5Q96PW8 444 aa20.5■□□□□ 0.87
MBD1-216ENST00000587605 ARL8BQ9NVJ2 186 aa20.5■□□□□ 0.87
MBD1-216ENST00000587605 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.5■□□□□ 0.87
MBD1-216ENST00000587605 UBQLN1Q9UMX0 589 aaKnown RBP20.5■□□□□ 0.87
MBD1-216ENST00000587605 MAD1L1Q9Y6D9 718 aa20.5■□□□□ 0.87
MBD1-216ENST00000587605 PLXNB2O15031 1838 aa20.5■□□□□ 0.87
MBD1-216ENST00000587605 A8MXQ7 604 aa20.49■□□□□ 0.87
MBD1-216ENST00000587605 GABBR2O75899 941 aa20.49■□□□□ 0.87
MBD1-216ENST00000587605 MYL2P10916 166 aa20.49■□□□□ 0.87
MBD1-216ENST00000587605 SCN1AP35498 2009 aa20.49■□□□□ 0.87
MBD1-216ENST00000587605 PNPLA4P41247 253 aa20.49■□□□□ 0.87
MBD1-216ENST00000587605 TBCCQ15814 346 aa20.49■□□□□ 0.87
MBD1-216ENST00000587605 EFHC1Q5JVL4 640 aa20.49■□□□□ 0.87
MBD1-216ENST00000587605 MARCH8Q5T0T0 291 aa20.49■□□□□ 0.87
MBD1-216ENST00000587605 GJC2Q5T442 439 aaPredicted RBP20.49■□□□□ 0.87
MBD1-216ENST00000587605 C9orf57Q5W0N0 161 aa20.49■□□□□ 0.87
MBD1-216ENST00000587605 NOTUMQ6P988 496 aa20.49■□□□□ 0.87
MBD1-216ENST00000587605 KCNT2Q6UVM3 1135 aa20.49■□□□□ 0.87
MBD1-216ENST00000587605 C4orf50Q6ZRC1 276 aa20.49■□□□□ 0.87
MBD1-216ENST00000587605 TFB1MQ8WVM0 346 aaKnown RBP20.49■□□□□ 0.87
MBD1-216ENST00000587605 CADM1Q9BY67 442 aaKnown RBP20.49■□□□□ 0.87
MBD1-216ENST00000587605 WWP1Q9H0M0 922 aa20.49■□□□□ 0.87
MBD1-216ENST00000587605 DENND2DQ9H6A0 471 aaPredicted RBP20.49■□□□□ 0.87
MBD1-216ENST00000587605 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.49■□□□□ 0.87
MBD1-216ENST00000587605 LRRC42Q9Y546 428 aa20.49■□□□□ 0.87
MBD1-216ENST00000587605 A0A0A0MRY4 1105 aa20.49■□□□□ 0.87
MBD1-216ENST00000587605 DCAF8L1A6NGE4 600 aa20.49■□□□□ 0.87
MBD1-216ENST00000587605 GYG2O15488 501 aa20.49■□□□□ 0.87
MBD1-216ENST00000587605 XPOTO43592 962 aaKnown RBP20.49■□□□□ 0.87
MBD1-216ENST00000587605 STRNO43815 780 aa20.49■□□□□ 0.87
MBD1-216ENST00000587605 METTL18O95568 372 aa20.49■□□□□ 0.87
MBD1-216ENST00000587605 ESRRAP11474 423 aaPredicted RBP20.49■□□□□ 0.87
MBD1-216ENST00000587605 ADORA2AP29274 412 aa20.49■□□□□ 0.87
MBD1-216ENST00000587605 ARL4AP40617 200 aa20.49■□□□□ 0.87
MBD1-216ENST00000587605 MRPS5P82675 430 aaKnown RBP20.49■□□□□ 0.87
MBD1-216ENST00000587605 TMPRSS15P98073 1019 aa20.49■□□□□ 0.87
MBD1-216ENST00000587605 GBE1Q04446 702 aa20.49■□□□□ 0.87
MBD1-216ENST00000587605 KYAT3Q6YP21 454 aaKnown RBP20.49■□□□□ 0.87
MBD1-216ENST00000587605 NUDCD3Q8IVD9 361 aa20.49■□□□□ 0.87
MBD1-216ENST00000587605 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.49■□□□□ 0.87
MBD1-216ENST00000587605 NLGN2Q8NFZ4 835 aa20.49■□□□□ 0.87
MBD1-216ENST00000587605 DEPDC1BQ8WUY9 529 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms