RNA–Protein interactions for RNA: ENST00000587228.5

GPATCH8-205, Transcript of G-patch domain containing 8, humanhuman

TSL 1 (best)

Gene GPATCH8, Length 4,713 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-205ENST00000587228 CDK5RAP1Q96SZ6 601 aaKnown RBP10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 NAT9Q9BTE0 207 aa10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 CCDC90BQ9GZT6 254 aa10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 KIF17Q9P2E2 1029 aa10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 SF3B1O75533 1304 aaKnown RBP eCLIP10.02□□□□□ -0.814e-6■■■■■ 131
GPATCH8-205ENST00000587228 CLASP2O75122 1294 aaKnown RBP10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 STMN1P16949 149 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 GCKP35557 465 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 OVGP1Q12889 678 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 AGAP9Q5VTM2 703 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 ANKRD23Q86SG2 305 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 ZDHHC17Q8IUH5 632 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 TAGAPQ8N103 731 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 VCPIP1Q96JH7 1222 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 FRMD8P1Q9BZ68 369 aaPredicted RBP10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 HIPK3Q9H422 1215 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 NCAM2O15394 837 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 USP12O75317 370 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 FGRP09769 529 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 TCN1P20061 433 aaPredicted RBP10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 ATP5C1P36542 298 aaKnown RBP10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 BRCC3P46736 316 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 BMPR2Q13873 1038 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 ZC3H12AQ5D1E8 599 aaKnown RBP10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 ACTRT1Q8TDG2 376 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 ERP27Q96DN0 273 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 GPR20Q99678 358 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 CORO1BQ9BR76 489 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 CDC42EP4Q9H3Q1 356 aaKnown RBP10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 C10orf88Q9H8K7 445 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 FAM105AQ9NUU6 356 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 FAM95CA0A1B0GW59 222 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 TRUB2O95900 331 aaKnown RBP10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 HDCP19113 662 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 PLA2G4AP47712 749 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 HIC1Q14526 733 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 PDCD2Q16342 344 aaPredicted RBP10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 PAPD7Q5XG87 772 aaKnown RBP10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 UGT3A1Q6NUS8 523 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 KCNT2Q6UVM3 1135 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 C3orf20Q8ND61 904 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 ZBTB10Q96DT7 871 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 PSD3Q9NYI0 1048 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 WARS2Q9UGM6 360 aaKnown RBP10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 SCOCQ9UIL1 159 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 RNF112Q9ULX5 631 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 FAF1Q9UNN5 650 aaPredicted RBP10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 RUVBL2Q9Y230 463 aaKnown RBP10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 PLA2G6O60733 806 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 GLP2RO95838 553 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 ASGR1P07306 291 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 MPP3Q13368 585 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 LRRC55Q6ZSA7 311 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 RBM23Q86U06 439 aaKnown RBP10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 CCNJLQ8IV13 435 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 C12orf29Q8N999 325 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 B3GALNT2Q8NCR0 500 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 SRPK1Q96SB4 655 aaKnown RBP10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 FTHL17Q9BXU8 183 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 MRPL1Q9BYD6 325 aaKnown RBP10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 MANSC1Q9H8J5 431 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 GOLGA2P5Q9HBQ8 144 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 NDE1Q9NXR1 346 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 TAS2R14Q9NYV8 317 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 STOML1Q9UBI4 398 aa10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 UXTQ9UBK9 157 aaPredicted RBP10.01□□□□□ -0.81
GPATCH8-205ENST00000587228 TBC1D3BA6NDS4 549 aa10□□□□□ -0.81
GPATCH8-205ENST00000587228 TREHO43280 583 aa10□□□□□ -0.81
GPATCH8-205ENST00000587228 NPR3P17342 541 aa10□□□□□ -0.81
GPATCH8-205ENST00000587228 DDX5P17844 614 aaKnown RBP10□□□□□ -0.81
GPATCH8-205ENST00000587228 BMP6P22004 513 aa10□□□□□ -0.81
GPATCH8-205ENST00000587228 ATP6V1E1P36543 226 aa10□□□□□ -0.81
GPATCH8-205ENST00000587228 SFSWAPQ12872 951 aaKnown RBP10□□□□□ -0.81
GPATCH8-205ENST00000587228 HIST2H2ACQ16777 129 aaPredicted RBP10□□□□□ -0.81
GPATCH8-205ENST00000587228 AGBL2Q5U5Z8 902 aa10□□□□□ -0.81
GPATCH8-205ENST00000587228 HIST2H2AA3Q6FI13 130 aa10□□□□□ -0.81
GPATCH8-205ENST00000587228 CES3Q6UWW8 571 aa10□□□□□ -0.81
GPATCH8-205ENST00000587228 ABHD15Q6UXT9 468 aa10□□□□□ -0.81
GPATCH8-205ENST00000587228 PPTC7Q8NI37 304 aa10□□□□□ -0.81
GPATCH8-205ENST00000587228 HTR3CQ8WXA8 447 aa10□□□□□ -0.81
GPATCH8-205ENST00000587228 HPS4Q9NQG7 708 aa10□□□□□ -0.81
GPATCH8-205ENST00000587228 MSRAQ9UJ68 235 aa10□□□□□ -0.81
GPATCH8-205ENST00000587228 USP15Q9Y4E8 981 aaPredicted RBP10□□□□□ -0.81
GPATCH8-205ENST00000587228 ZSCAN5CA6NGD5 496 aaPredicted RBP10□□□□□ -0.81
GPATCH8-205ENST00000587228 ERI2A8K979 691 aaKnown RBP10□□□□□ -0.81
GPATCH8-205ENST00000587228 PDZK1P1A8MUH7 402 aa10□□□□□ -0.81
GPATCH8-205ENST00000587228 CHUKO15111 745 aa10□□□□□ -0.81
GPATCH8-205ENST00000587228 TIMM44O43615 452 aa10□□□□□ -0.81
GPATCH8-205ENST00000587228 ALDH1A2O94788 518 aa10□□□□□ -0.81
GPATCH8-205ENST00000587228 SNHG28P0DPA3 235 aa10□□□□□ -0.81
GPATCH8-205ENST00000587228 ZBTB48P10074 688 aaPredicted RBP10□□□□□ -0.81
GPATCH8-205ENST00000587228 PRLRP16471 622 aa10□□□□□ -0.81
GPATCH8-205ENST00000587228 CNGA2Q16280 664 aa10□□□□□ -0.81
GPATCH8-205ENST00000587228 PABPC1LQ4VXU2 614 aaKnown RBP10□□□□□ -0.81
GPATCH8-205ENST00000587228 TEDDM1Q5T9Z0 273 aa10□□□□□ -0.81
GPATCH8-205ENST00000587228 CES5AQ6NT32 575 aa10□□□□□ -0.81
GPATCH8-205ENST00000587228 UNC93AQ86WB7 457 aa10□□□□□ -0.81
GPATCH8-205ENST00000587228 GPR152Q8TDT2 470 aa10□□□□□ -0.81
GPATCH8-205ENST00000587228 UBE2OQ9C0C9 1292 aaKnown RBP10□□□□□ -0.81
GPATCH8-205ENST00000587228 GPAMQ9HCL2 828 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms