RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 ZDHHC11BP0C7U3 371 aa13.2□□□□□ -0.3
VMP1-202ENST00000585847 MCM3P25205 808 aa13.2□□□□□ -0.3
VMP1-202ENST00000585847 YWHAQP27348 245 aa13.2□□□□□ -0.3
VMP1-202ENST00000585847 PTPN9P43378 593 aa13.2□□□□□ -0.3
VMP1-202ENST00000585847 ZNF143P52747 638 aaPredicted RBP13.2□□□□□ -0.3
VMP1-202ENST00000585847 SLC6A3Q01959 620 aa13.2□□□□□ -0.3
VMP1-202ENST00000585847 ZP2Q05996 745 aa13.2□□□□□ -0.3
VMP1-202ENST00000585847 ADIGQ0VDE8 80 aa13.2□□□□□ -0.3
VMP1-202ENST00000585847 TAF10Q12962 218 aa13.2□□□□□ -0.3
VMP1-202ENST00000585847 VEPH1Q14D04 833 aa13.2□□□□□ -0.3
VMP1-202ENST00000585847 FAM102AQ5T9C2 384 aaPredicted RBP13.2□□□□□ -0.3
VMP1-202ENST00000585847 PM20D1Q6GTS8 502 aa13.2□□□□□ -0.3
VMP1-202ENST00000585847 OLFML1Q6UWY5 402 aa13.2□□□□□ -0.3
VMP1-202ENST00000585847 SCD5Q86SK9 330 aa13.2□□□□□ -0.3
VMP1-202ENST00000585847 ITIH5Q86UX2 942 aa13.2□□□□□ -0.3
VMP1-202ENST00000585847 DNAAF5Q86Y56 855 aa13.2□□□□□ -0.3
VMP1-202ENST00000585847 ADHFE1Q8IWW8 467 aa13.2□□□□□ -0.3
VMP1-202ENST00000585847 CLEC4CQ8WTT0 213 aa13.2□□□□□ -0.3
VMP1-202ENST00000585847 CD101Q93033 1021 aa13.2□□□□□ -0.3
VMP1-202ENST00000585847 RBM41Q96IZ5 413 aaKnown RBP13.2□□□□□ -0.3
VMP1-202ENST00000585847 PIWIL1Q96J94 861 aaKnown RBP13.2□□□□□ -0.3
VMP1-202ENST00000585847 RUNDC3BQ96NL0 473 aa13.2□□□□□ -0.3
VMP1-202ENST00000585847 MCEEQ96PE7 176 aa13.2□□□□□ -0.3
VMP1-202ENST00000585847 ULBP1Q9BZM6 244 aa13.2□□□□□ -0.3
VMP1-202ENST00000585847 PRDM16Q9HAZ2 1276 aa13.2□□□□□ -0.3
VMP1-202ENST00000585847 PIDD1Q9HB75 910 aa13.2□□□□□ -0.3
VMP1-202ENST00000585847 NMUR1Q9HB89 426 aa13.2□□□□□ -0.3
VMP1-202ENST00000585847 ST7Q9NRC1 585 aa13.2□□□□□ -0.3
VMP1-202ENST00000585847 OSER1Q9NX31 292 aa13.2□□□□□ -0.3
VMP1-202ENST00000585847 SCML2Q9UQR0 700 aa13.2□□□□□ -0.3
VMP1-202ENST00000585847 PCDHA3Q9Y5H8 950 aa13.2□□□□□ -0.3
VMP1-202ENST00000585847 E5RJQ4 531 aa13.19□□□□□ -0.3
VMP1-202ENST00000585847 CCDC188H7C350 402 aa13.19□□□□□ -0.3
VMP1-202ENST00000585847 KCNK3O14649 394 aa13.19□□□□□ -0.3
VMP1-202ENST00000585847 RIOK3O14730 519 aaKnown RBP13.19□□□□□ -0.3
VMP1-202ENST00000585847 PAPSS1O43252 624 aaPredicted RBP13.19□□□□□ -0.3
VMP1-202ENST00000585847 CTIFO43310 598 aaKnown RBP13.19□□□□□ -0.3
VMP1-202ENST00000585847 ZNF189O75820 626 aaPredicted RBP13.19□□□□□ -0.3
VMP1-202ENST00000585847 RTN3O95197 1032 aaPredicted RBP13.19□□□□□ -0.3
VMP1-202ENST00000585847 FTCDO95954 541 aa13.19□□□□□ -0.3
VMP1-202ENST00000585847 USP17L7P0C7H9 530 aa13.19□□□□□ -0.3
VMP1-202ENST00000585847 MYL4P12829 197 aa13.19□□□□□ -0.3
VMP1-202ENST00000585847 LCP1P13796 627 aa13.19□□□□□ -0.3
VMP1-202ENST00000585847 CEBPBP17676 345 aa13.19□□□□□ -0.3
VMP1-202ENST00000585847 COMTP21964 271 aa13.19□□□□□ -0.3
VMP1-202ENST00000585847 GABRR2P28476 465 aa13.19□□□□□ -0.3
VMP1-202ENST00000585847 SDC4P31431 198 aa13.19□□□□□ -0.3
VMP1-202ENST00000585847 MTHFRP42898 656 aa13.19□□□□□ -0.3
VMP1-202ENST00000585847 TKTL1P51854 596 aa13.19□□□□□ -0.3
VMP1-202ENST00000585847 AIF1P55008 147 aa13.19□□□□□ -0.3
VMP1-202ENST00000585847 DAOAP59103 153 aa13.19□□□□□ -0.3
VMP1-202ENST00000585847 COPS2P61201 443 aa13.19□□□□□ -0.3
VMP1-202ENST00000585847 CYP4F8P98187 520 aa13.19□□□□□ -0.3
VMP1-202ENST00000585847 IFRD2Q12894 506 aaPredicted RBP13.19□□□□□ -0.3
VMP1-202ENST00000585847 MTA1Q13330 715 aa13.19□□□□□ -0.3
VMP1-202ENST00000585847 MESDQ14696 234 aa13.19□□□□□ -0.3
VMP1-202ENST00000585847 TEAD2Q15562 447 aa13.19□□□□□ -0.3
VMP1-202ENST00000585847 PABPC1LQ4VXU2 614 aaKnown RBP13.19□□□□□ -0.3
VMP1-202ENST00000585847 ATAT1Q5SQI0 421 aa13.19□□□□□ -0.3
VMP1-202ENST00000585847 STXBP5Q5T5C0 1151 aa13.19□□□□□ -0.3
VMP1-202ENST00000585847 SEL1L2Q5TEA6 688 aa13.19□□□□□ -0.3
VMP1-202ENST00000585847 CES5AQ6NT32 575 aa13.19□□□□□ -0.3
VMP1-202ENST00000585847 HFE2Q6ZVN8 426 aa13.19□□□□□ -0.3
VMP1-202ENST00000585847 PSTKQ8IV42 348 aaKnown RBP13.19□□□□□ -0.3
VMP1-202ENST00000585847 KATNAL2Q8IYT4 538 aa13.19□□□□□ -0.3
VMP1-202ENST00000585847 ELMOD1Q8N336 334 aa13.19□□□□□ -0.3
VMP1-202ENST00000585847 ARHGAP18Q8N392 663 aa13.19□□□□□ -0.3
VMP1-202ENST00000585847 RASGEF1CQ8N431 466 aa13.19□□□□□ -0.3
VMP1-202ENST00000585847 MYADMQ96S97 322 aa13.19□□□□□ -0.3
VMP1-202ENST00000585847 KCNH6Q9H252 994 aa13.19□□□□□ -0.3
VMP1-202ENST00000585847 ASAH2Q9NR71 780 aa13.19□□□□□ -0.3
VMP1-202ENST00000585847 HOMER3Q9NSC5 361 aa13.19□□□□□ -0.3
VMP1-202ENST00000585847 GMIPQ9P107 970 aa13.19□□□□□ -0.3
VMP1-202ENST00000585847 CHORDC1Q9UHD1 332 aaPredicted RBP13.19□□□□□ -0.3
VMP1-202ENST00000585847 STAP1Q9ULZ2 295 aa13.19□□□□□ -0.3
VMP1-202ENST00000585847 EFR3BQ9Y2G0 817 aa13.19□□□□□ -0.3
VMP1-202ENST00000585847 NUP210Q8TEM1 1887 aaPredicted RBP13.19□□□□□ -0.3
VMP1-202ENST00000585847 HELZP42694 1942 aaKnown RBP13.18□□□□□ -0.3
VMP1-202ENST00000585847 A0A1W2PRU2 124 aa13.18□□□□□ -0.3
VMP1-202ENST00000585847 ZNF840PA6NDX5 716 aa13.18□□□□□ -0.3
VMP1-202ENST00000585847 ZNF487B1APH4 448 aa13.18□□□□□ -0.3
VMP1-202ENST00000585847 ENC1O14682 589 aa13.18□□□□□ -0.3
VMP1-202ENST00000585847 ATMINO43313 823 aaPredicted RBP13.18□□□□□ -0.3
VMP1-202ENST00000585847 PTPN7P35236 360 aa13.18□□□□□ -0.3
VMP1-202ENST00000585847 ZNF135P52742 658 aaPredicted RBP13.18□□□□□ -0.3
VMP1-202ENST00000585847 CBX2Q14781 532 aaPredicted RBP13.18□□□□□ -0.3
VMP1-202ENST00000585847 SMAD2Q15796 467 aaKnown RBP13.18□□□□□ -0.3
VMP1-202ENST00000585847 GLE1Q53GS7 698 aaKnown RBP13.18□□□□□ -0.3
VMP1-202ENST00000585847 C2CD6Q53TS8 623 aa13.18□□□□□ -0.3
VMP1-202ENST00000585847 SNX30Q5VWJ9 437 aa13.18□□□□□ -0.3
VMP1-202ENST00000585847 PDZD4Q76G19 769 aaPredicted RBP13.18□□□□□ -0.3
VMP1-202ENST00000585847 EXD1Q8NHP7 514 aa13.18□□□□□ -0.3
VMP1-202ENST00000585847 ING5Q8WYH8 240 aa13.18□□□□□ -0.3
VMP1-202ENST00000585847 FBXO32Q969P5 355 aa13.18□□□□□ -0.3
VMP1-202ENST00000585847 RIPOR3Q96MK2 946 aa13.18□□□□□ -0.3
VMP1-202ENST00000585847 FBXO44Q9H4M3 255 aa13.18□□□□□ -0.3
VMP1-202ENST00000585847 TMEM59LQ9UK28 342 aa13.18□□□□□ -0.3
VMP1-202ENST00000585847 A0A1W2PQH9 124 aa13.17□□□□□ -0.3
VMP1-202ENST00000585847 C2CD4BA6NLJ0 364 aa13.17□□□□□ -0.3
VMP1-202ENST00000585847 YJEFN3A6XGL0 299 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms