RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 HECTD3Q5T447 861 aa16.81■□□□□ 0.28
SS18-226ENST00000585241 PSTKQ8IV42 348 aaKnown RBP16.81■□□□□ 0.28
SS18-226ENST00000585241 KATNAL2Q8IYT4 538 aa16.81■□□□□ 0.28
SS18-226ENST00000585241 TEKT4Q8WW24 435 aa16.81■□□□□ 0.28
SS18-226ENST00000585241 ALG3Q92685 438 aa16.81■□□□□ 0.28
SS18-226ENST00000585241 SLC39A13Q96H72 371 aa16.81■□□□□ 0.28
SS18-226ENST00000585241 CARD9Q9H257 536 aa16.81■□□□□ 0.28
SS18-226ENST00000585241 CCSER2Q9H7U1 834 aa16.81■□□□□ 0.28
SS18-226ENST00000585241 FAM204AQ9H8W3 233 aa16.81■□□□□ 0.28
SS18-226ENST00000585241 DDIT4Q9NX09 232 aa16.81■□□□□ 0.28
SS18-226ENST00000585241 DNMT3BQ9UBC3 853 aaKnown RBP16.81■□□□□ 0.28
SS18-226ENST00000585241 PRRC2BQ5JSZ5 2229 aaKnown RBP16.8■□□□□ 0.28
SS18-226ENST00000585241 CCDC195A0A1B0GUA6 201 aa16.8■□□□□ 0.28
SS18-226ENST00000585241 SOBPA7XYQ1 873 aa16.8■□□□□ 0.28
SS18-226ENST00000585241 MDM4O15151 490 aa16.8■□□□□ 0.28
SS18-226ENST00000585241 PRPSAP2O60256 369 aa16.8■□□□□ 0.28
SS18-226ENST00000585241 RHOP08100 348 aa16.8■□□□□ 0.28
SS18-226ENST00000585241 GBP1P32455 592 aa16.8■□□□□ 0.28
SS18-226ENST00000585241 ATXN1P54253 815 aaKnown RBP16.8■□□□□ 0.28
SS18-226ENST00000585241 SCAPQ12770 1279 aa16.8■□□□□ 0.28
SS18-226ENST00000585241 ADGRE1Q14246 886 aa16.8■□□□□ 0.28
SS18-226ENST00000585241 BOLA3Q53S33 107 aa16.8■□□□□ 0.28
SS18-226ENST00000585241 PRSS36Q5K4E3 855 aa16.8■□□□□ 0.28
SS18-226ENST00000585241 ZNF697Q5TEC3 545 aa16.8■□□□□ 0.28
SS18-226ENST00000585241 DCAF12L1Q5VU92 463 aa16.8■□□□□ 0.28
SS18-226ENST00000585241 TXNRD3NBQ6F5E7 133 aa16.8■□□□□ 0.28
SS18-226ENST00000585241 RSRC2Q7L4I2 434 aaKnown RBP16.8■□□□□ 0.28
SS18-226ENST00000585241 ADAM32Q8TC27 787 aa16.8■□□□□ 0.28
SS18-226ENST00000585241 OSBPL9Q96SU4 736 aa16.8■□□□□ 0.28
SS18-226ENST00000585241 CORO1BQ9BR76 489 aa16.8■□□□□ 0.28
SS18-226ENST00000585241 RRAGDQ9NQL2 400 aaPredicted RBP16.8■□□□□ 0.28
SS18-226ENST00000585241 DDX56Q9NY93 547 aaKnown RBP16.8■□□□□ 0.28
SS18-226ENST00000585241 SFMBT1Q9UHJ3 866 aa16.8■□□□□ 0.28
SS18-226ENST00000585241 TLR6Q9Y2C9 796 aa16.8■□□□□ 0.28
SS18-226ENST00000585241 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.8■□□□□ 0.28
SS18-226ENST00000585241 MOSPD3O75425 235 aa16.79■□□□□ 0.28
SS18-226ENST00000585241 IGLV3-27P01718 113 aa16.79■□□□□ 0.28
SS18-226ENST00000585241 SRGAP2BP0DMP2 458 aa16.79■□□□□ 0.28
SS18-226ENST00000585241 DDX6P26196 483 aaKnown RBP eCLIP16.79■□□□□ 0.28
SS18-226ENST00000585241 ATP5C1P36542 298 aaKnown RBP16.79■□□□□ 0.28
SS18-226ENST00000585241 CCR2P41597 374 aa16.79■□□□□ 0.28
SS18-226ENST00000585241 RWDD2BP57060 319 aa16.79■□□□□ 0.28
SS18-226ENST00000585241 RING1Q06587 406 aa16.79■□□□□ 0.28
SS18-226ENST00000585241 NME3Q13232 169 aa16.79■□□□□ 0.28
SS18-226ENST00000585241 ADAM15Q13444 863 aa16.79■□□□□ 0.28
SS18-226ENST00000585241 PPP2R5DQ14738 602 aa16.79■□□□□ 0.28
SS18-226ENST00000585241 TRIP4Q15650 581 aaPredicted RBP16.79■□□□□ 0.28
SS18-226ENST00000585241 CTC1Q2NKJ3 1217 aa16.79■□□□□ 0.28
SS18-226ENST00000585241 BRMS1LQ5PSV4 323 aa16.79■□□□□ 0.28
SS18-226ENST00000585241 C10orf120Q5SQS8 335 aa16.79■□□□□ 0.28
SS18-226ENST00000585241 GPR153Q6NV75 609 aa16.79■□□□□ 0.28
SS18-226ENST00000585241 ANKRD54Q6NXT1 300 aa16.79■□□□□ 0.28
SS18-226ENST00000585241 FAM131BQ86XD5 332 aa16.79■□□□□ 0.28
SS18-226ENST00000585241 EXD1Q8NHP7 514 aa16.79■□□□□ 0.28
SS18-226ENST00000585241 SHKBP1Q8TBC3 707 aa16.79■□□□□ 0.28
SS18-226ENST00000585241 FAM71BQ8TC56 605 aa16.79■□□□□ 0.28
SS18-226ENST00000585241 MRPS31Q92665 395 aaKnown RBP16.79■□□□□ 0.28
SS18-226ENST00000585241 GCNAQ96QF7 691 aa16.79■□□□□ 0.28
SS18-226ENST00000585241 HCFC1R1Q9NWW0 138 aa16.79■□□□□ 0.28
SS18-226ENST00000585241 ARHGEF38Q9NXL2 777 aa16.79■□□□□ 0.28
SS18-226ENST00000585241 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.79■□□□□ 0.28
SS18-226ENST00000585241 MARCH2Q9P0N8 246 aa16.79■□□□□ 0.28
SS18-226ENST00000585241 DNMT3LQ9UJW3 386 aa16.79■□□□□ 0.28
SS18-226ENST00000585241 NUDT5Q9UKK9 219 aa16.79■□□□□ 0.28
SS18-226ENST00000585241 HBS1LQ9Y450 684 aaKnown RBP16.79■□□□□ 0.28
SS18-226ENST00000585241 SAR1BQ9Y6B6 198 aa16.79■□□□□ 0.28
SS18-226ENST00000585241 CLUHO75153 1309 aa16.78■□□□□ 0.28
SS18-226ENST00000585241 C2orf78A6NCI8 922 aa16.78■□□□□ 0.28
SS18-226ENST00000585241 NRG2O14511 850 aaPredicted RBP16.78■□□□□ 0.28
SS18-226ENST00000585241 COCHO43405 550 aa16.78■□□□□ 0.28
SS18-226ENST00000585241 TBX18O95935 607 aa16.78■□□□□ 0.28
SS18-226ENST00000585241 RARAP10276 462 aa16.78■□□□□ 0.28
SS18-226ENST00000585241 MYL4P12829 197 aa16.78■□□□□ 0.28
SS18-226ENST00000585241 HOXB8P17481 243 aaPredicted RBP16.78■□□□□ 0.28
SS18-226ENST00000585241 SSR1P43307 286 aaKnown RBP16.78■□□□□ 0.28
SS18-226ENST00000585241 ARSEP51690 589 aa16.78■□□□□ 0.28
SS18-226ENST00000585241 KPNA1P52294 538 aaPredicted RBP16.78■□□□□ 0.28
SS18-226ENST00000585241 EFEMP1Q12805 493 aa16.78■□□□□ 0.28
SS18-226ENST00000585241 TUBB2AQ13885 445 aa16.78■□□□□ 0.28
SS18-226ENST00000585241 SYCE2Q6PIF2 218 aa16.78■□□□□ 0.28
SS18-226ENST00000585241 PDZD4Q76G19 769 aaPredicted RBP16.78■□□□□ 0.28
SS18-226ENST00000585241 SND1Q7KZF4 910 aaKnown RBP eCLIP16.78■□□□□ 0.28
SS18-226ENST00000585241 VSIG1Q86XK7 387 aa16.78■□□□□ 0.28
SS18-226ENST00000585241 CCDC185Q8N715 623 aa16.78■□□□□ 0.28
SS18-226ENST00000585241 SMG7Q92540 1137 aaKnown RBP16.78■□□□□ 0.28
SS18-226ENST00000585241 ZNF592Q92610 1267 aa16.78■□□□□ 0.28
SS18-226ENST00000585241 LRCH3Q96II8 777 aa16.78■□□□□ 0.28
SS18-226ENST00000585241 PBKQ96KB5 322 aa16.78■□□□□ 0.28
SS18-226ENST00000585241 FCRL2Q96LA5 508 aaPredicted RBP16.78■□□□□ 0.28
SS18-226ENST00000585241 SNRNP25Q9BV90 132 aaKnown RBP16.78■□□□□ 0.28
SS18-226ENST00000585241 TUBB2BQ9BVA1 445 aa16.78■□□□□ 0.28
SS18-226ENST00000585241 PCSK1NQ9UHG2 260 aa16.78■□□□□ 0.28
SS18-226ENST00000585241 ZMYM5Q9UJ78 669 aa16.78■□□□□ 0.28
SS18-226ENST00000585241 RASAL2Q9UJF2 1139 aa16.78■□□□□ 0.28
SS18-226ENST00000585241 FZD10Q9ULW2 581 aa16.78■□□□□ 0.28
SS18-226ENST00000585241 DOCK6Q96HP0 2047 aa16.78■□□□□ 0.28
SS18-226ENST00000585241 A0A1W2PRU2 124 aa16.77■□□□□ 0.28
SS18-226ENST00000585241 KCNU1A8MYU2 1149 aa16.77■□□□□ 0.28
SS18-226ENST00000585241 ZNF487B1APH4 448 aa16.77■□□□□ 0.28
SS18-226ENST00000585241 I6L893 689 aaPredicted RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms