RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 SPEM2Q0P670 501 aa12.95□□□□□ -0.34
SS18-225ENST00000585121 ELF2Q15723 593 aa12.95□□□□□ -0.34
SS18-225ENST00000585121 CRY1Q16526 586 aa12.95□□□□□ -0.34
SS18-225ENST00000585121 CT47A1Q5JQC4 288 aaPredicted RBP12.95□□□□□ -0.34
SS18-225ENST00000585121 PMF1Q6P1K2 205 aa12.95□□□□□ -0.34
SS18-225ENST00000585121 DENND1CQ8IV53 801 aa12.95□□□□□ -0.34
SS18-225ENST00000585121 FMNL3Q8IVF7 1028 aa12.95□□□□□ -0.34
SS18-225ENST00000585121 FAM160A2Q8N612 972 aaPredicted RBP12.95□□□□□ -0.34
SS18-225ENST00000585121 IL17RCQ8NAC3 791 aa12.95□□□□□ -0.34
SS18-225ENST00000585121 NDRG1Q92597 394 aaKnown RBP12.95□□□□□ -0.34
SS18-225ENST00000585121 EDEM1Q92611 657 aa12.95□□□□□ -0.34
SS18-225ENST00000585121 BHMTQ93088 406 aa12.95□□□□□ -0.34
SS18-225ENST00000585121 LOXL4Q96JB6 756 aa12.95□□□□□ -0.34
SS18-225ENST00000585121 APEX2Q9UBZ4 518 aa12.95□□□□□ -0.34
SS18-225ENST00000585121 CNTN6Q9UQ52 1028 aa12.95□□□□□ -0.34
SS18-225ENST00000585121 YJEFN3A6XGL0 299 aa12.94□□□□□ -0.34
SS18-225ENST00000585121 E7ENQ6 273 aa12.94□□□□□ -0.34
SS18-225ENST00000585121 SART1O43290 800 aaKnown RBP12.94□□□□□ -0.34
SS18-225ENST00000585121 THAP12O43422 761 aa12.94□□□□□ -0.34
SS18-225ENST00000585121 RHOBTB1O94844 696 aa12.94□□□□□ -0.34
SS18-225ENST00000585121 LETM1O95202 739 aaPredicted RBP12.94□□□□□ -0.34
SS18-225ENST00000585121 PRKCSHP14314 528 aaPredicted RBP12.94□□□□□ -0.34
SS18-225ENST00000585121 USP8P40818 1118 aa12.94□□□□□ -0.34
SS18-225ENST00000585121 KIR2DL1P43626 348 aaPredicted RBP12.94□□□□□ -0.34
SS18-225ENST00000585121 ACADSBP45954 432 aa12.94□□□□□ -0.34
SS18-225ENST00000585121 MESP2Q0VG99 397 aa12.94□□□□□ -0.34
SS18-225ENST00000585121 E2F5Q15329 346 aa12.94□□□□□ -0.34
SS18-225ENST00000585121 MEA1Q16626 185 aa12.94□□□□□ -0.34
SS18-225ENST00000585121 MAN2A1Q16706 1144 aa12.94□□□□□ -0.34
SS18-225ENST00000585121 ARHGAP44Q17R89 818 aa12.94□□□□□ -0.34
SS18-225ENST00000585121 EMC10Q5UCC4 262 aa12.94□□□□□ -0.34
SS18-225ENST00000585121 ANO7Q6IWH7 933 aa12.94□□□□□ -0.34
SS18-225ENST00000585121 TRIM65Q6PJ69 517 aa12.94□□□□□ -0.34
SS18-225ENST00000585121 SFTPA1Q8IWL2 248 aa12.94□□□□□ -0.34
SS18-225ENST00000585121 PHTF2Q8N3S3 785 aa12.94□□□□□ -0.34
SS18-225ENST00000585121 ZNF513Q8N8E2 541 aaPredicted RBP12.94□□□□□ -0.34
SS18-225ENST00000585121 ST7Q9NRC1 585 aa12.94□□□□□ -0.34
SS18-225ENST00000585121 LMBRD1Q9NUN5 540 aa12.94□□□□□ -0.34
SS18-225ENST00000585121 BCCIPQ9P287 314 aaKnown RBP eCLIP12.94□□□□□ -0.34
SS18-225ENST00000585121 AGO1Q9UL18 857 aaKnown RBP12.94□□□□□ -0.34
SS18-225ENST00000585121 PIK3R2O00459 728 aa12.93□□□□□ -0.34
SS18-225ENST00000585121 PES1O00541 588 aaKnown RBP12.93□□□□□ -0.34
SS18-225ENST00000585121 LTFP02788 710 aa12.93□□□□□ -0.34
SS18-225ENST00000585121 KLKB1P03952 638 aa12.93□□□□□ -0.34
SS18-225ENST00000585121 SLC9A1P19634 815 aa12.93□□□□□ -0.34
SS18-225ENST00000585121 GNA15P30679 374 aa12.93□□□□□ -0.34
SS18-225ENST00000585121 ZNF445P59923 1031 aa12.93□□□□□ -0.34
SS18-225ENST00000585121 BYSLQ13895 437 aaKnown RBP12.93□□□□□ -0.34
SS18-225ENST00000585121 TRIP4Q15650 581 aaPredicted RBP12.93□□□□□ -0.34
SS18-225ENST00000585121 DPCR1Q3MIW9 517 aa12.93□□□□□ -0.34
SS18-225ENST00000585121 SMYD5Q6GMV2 418 aa12.93□□□□□ -0.34
SS18-225ENST00000585121 BHLHA9Q7RTU4 235 aa12.93□□□□□ -0.34
SS18-225ENST00000585121 KBTBD6Q86V97 674 aa12.93□□□□□ -0.34
SS18-225ENST00000585121 IRF2BP1Q8IU81 584 aa12.93□□□□□ -0.34
SS18-225ENST00000585121 PGBD3Q8N328 593 aa12.93□□□□□ -0.34
SS18-225ENST00000585121 MED15Q96RN5 788 aa12.93□□□□□ -0.34
SS18-225ENST00000585121 ZSWIM1Q9BR11 485 aa12.93□□□□□ -0.34
SS18-225ENST00000585121 TRIM62Q9BVG3 475 aa12.93□□□□□ -0.34
SS18-225ENST00000585121 PLK2Q9NYY3 685 aa12.93□□□□□ -0.34
SS18-225ENST00000585121 STARD13Q9Y3M8 1113 aa12.93□□□□□ -0.34
SS18-225ENST00000585121 MYO16Q9Y6X6 1858 aa12.93□□□□□ -0.34
SS18-225ENST00000585121 SGK1O00141 431 aa12.93□□□□□ -0.34
SS18-225ENST00000585121 CALCAP01258 141 aa12.93□□□□□ -0.34
SS18-225ENST00000585121 PON1P27169 355 aa12.93□□□□□ -0.34
SS18-225ENST00000585121 NTSR1P30989 418 aa12.93□□□□□ -0.34
SS18-225ENST00000585121 GBP1P32455 592 aa12.93□□□□□ -0.34
SS18-225ENST00000585121 PUM1Q14671 1186 aaKnown RBP eCLIP12.93□□□□□ -0.34
SS18-225ENST00000585121 GJB7Q6PEY0 223 aa12.93□□□□□ -0.34
SS18-225ENST00000585121 TMEM92Q6UXU6 159 aa12.93□□□□□ -0.34
SS18-225ENST00000585121 RASSF3Q86WH2 238 aa12.93□□□□□ -0.34
SS18-225ENST00000585121 UNC45BQ8IWX7 931 aa12.93□□□□□ -0.34
SS18-225ENST00000585121 CHPFQ8IZ52 775 aa12.93□□□□□ -0.34
SS18-225ENST00000585121 CPXM2Q8N436 756 aa12.93□□□□□ -0.34
SS18-225ENST00000585121 DDI1Q8WTU0 396 aa12.93□□□□□ -0.34
SS18-225ENST00000585121 STK32AQ8WU08 396 aa12.93□□□□□ -0.34
SS18-225ENST00000585121 UCMAQ8WVF2 138 aa12.93□□□□□ -0.34
SS18-225ENST00000585121 ZNF606Q8WXB4 792 aa12.93□□□□□ -0.34
SS18-225ENST00000585121 ZC3H10Q96K80 434 aaKnown RBP12.93□□□□□ -0.34
SS18-225ENST00000585121 SPACA7Q96KW9 195 aa12.93□□□□□ -0.34
SS18-225ENST00000585121 TPSD1Q9BZJ3 242 aa12.93□□□□□ -0.34
SS18-225ENST00000585121 MIS12Q9H081 205 aa12.93□□□□□ -0.34
SS18-225ENST00000585121 SEMA4GQ9NTN9 838 aa12.93□□□□□ -0.34
SS18-225ENST00000585121 SFMBT1Q9UHJ3 866 aa12.93□□□□□ -0.34
SS18-225ENST00000585121 TCRBV21S2A2A0A5A6 115 aa12.92□□□□□ -0.34
SS18-225ENST00000585121 TRIM24O15164 1050 aa12.92□□□□□ -0.34
SS18-225ENST00000585121 LATS1O95835 1130 aa12.92□□□□□ -0.34
SS18-225ENST00000585121 PENKP01210 267 aaPredicted RBP12.92□□□□□ -0.34
SS18-225ENST00000585121 GPD2P43304 727 aa12.92□□□□□ -0.34
SS18-225ENST00000585121 PTK2Q05397 1052 aa12.92□□□□□ -0.34
SS18-225ENST00000585121 CSRP2Q16527 193 aa12.92□□□□□ -0.34
SS18-225ENST00000585121 RSPO4Q2I0M5 234 aaPredicted RBP12.92□□□□□ -0.34
SS18-225ENST00000585121 PLK5Q496M5 336 aa12.92□□□□□ -0.34
SS18-225ENST00000585121 VWA3BQ502W6 1294 aa12.92□□□□□ -0.34
SS18-225ENST00000585121 MPPE1Q53F39 396 aa12.92□□□□□ -0.34
SS18-225ENST00000585121 MSANTD2Q6P1R3 559 aa12.92□□□□□ -0.34
SS18-225ENST00000585121 HMGB4Q8WW32 186 aa12.92□□□□□ -0.34
SS18-225ENST00000585121 FAM149B1Q96BN6 582 aa12.92□□□□□ -0.34
SS18-225ENST00000585121 TUBGCP2Q9BSJ2 902 aa12.92□□□□□ -0.34
SS18-225ENST00000585121 SLC2A11Q9BYW1 496 aa12.92□□□□□ -0.34
SS18-225ENST00000585121 ARRDC1-AS1Q9H2J1 176 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms