RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 AVPR1AP37288 418 aa19.09■□□□□ 0.65
RFFL-211ENST00000584541 OGDHQ02218 1023 aa19.09■□□□□ 0.65
RFFL-211ENST00000584541 DEUP1Q05D60 604 aa19.09■□□□□ 0.65
RFFL-211ENST00000584541 SMAD4Q13485 552 aaKnown RBP19.09■□□□□ 0.65
RFFL-211ENST00000584541 CBX2Q14781 532 aaPredicted RBP19.09■□□□□ 0.65
RFFL-211ENST00000584541 C15orf59Q2T9L4 293 aaPredicted RBP19.09■□□□□ 0.65
RFFL-211ENST00000584541 TAC4Q86UU9 113 aa19.09■□□□□ 0.65
RFFL-211ENST00000584541 MIB1Q86YT6 1006 aa19.09■□□□□ 0.65
RFFL-211ENST00000584541 REXO1L1PQ8IX06 675 aa19.09■□□□□ 0.65
RFFL-211ENST00000584541 NIPA2Q8N8Q9 360 aa19.09■□□□□ 0.65
RFFL-211ENST00000584541 ARL14EPQ8N8R7 260 aaPredicted RBP19.09■□□□□ 0.65
RFFL-211ENST00000584541 MAFAQ8NHW3 353 aaPredicted RBP19.09■□□□□ 0.65
RFFL-211ENST00000584541 TPCN2Q8NHX9 752 aa19.09■□□□□ 0.65
RFFL-211ENST00000584541 FAM172AQ8WUF8 416 aa19.09■□□□□ 0.65
RFFL-211ENST00000584541 NT5C3BQ969T7 300 aa19.09■□□□□ 0.65
RFFL-211ENST00000584541 TBCBQ99426 244 aa19.09■□□□□ 0.65
RFFL-211ENST00000584541 SLC46A2Q9BY10 475 aa19.09■□□□□ 0.65
RFFL-211ENST00000584541 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.09■□□□□ 0.65
RFFL-211ENST00000584541 CDH22Q9UJ99 828 aa19.09■□□□□ 0.65
RFFL-211ENST00000584541 SALL4Q9UJQ4 1053 aa19.09■□□□□ 0.65
RFFL-211ENST00000584541 USP15Q9Y4E8 981 aaPredicted RBP19.09■□□□□ 0.65
RFFL-211ENST00000584541 SYNJ2BP-COX16A0A087WUM0 186 aa19.08■□□□□ 0.64
RFFL-211ENST00000584541 SLC12A8A0AV02 714 aa19.08■□□□□ 0.64
RFFL-211ENST00000584541 MDM4O15151 490 aa19.08■□□□□ 0.64
RFFL-211ENST00000584541 PROSCO94903 275 aa19.08■□□□□ 0.64
RFFL-211ENST00000584541 MOCS3O95396 460 aa19.08■□□□□ 0.64
RFFL-211ENST00000584541 OLFM2O95897 454 aa19.08■□□□□ 0.64
RFFL-211ENST00000584541 RDXP35241 583 aaKnown RBP19.08■□□□□ 0.64
RFFL-211ENST00000584541 COG7P83436 770 aa19.08■□□□□ 0.64
RFFL-211ENST00000584541 NME3Q13232 169 aa19.08■□□□□ 0.64
RFFL-211ENST00000584541 NNTQ13423 1086 aa19.08■□□□□ 0.64
RFFL-211ENST00000584541 STXBP5Q5T5C0 1151 aa19.08■□□□□ 0.64
RFFL-211ENST00000584541 DAAM2Q86T65 1068 aa19.08■□□□□ 0.64
RFFL-211ENST00000584541 CMTM8Q8IZV2 173 aa19.08■□□□□ 0.64
RFFL-211ENST00000584541 SYCE1Q8N0S2 351 aa19.08■□□□□ 0.64
RFFL-211ENST00000584541 ADAM32Q8TC27 787 aa19.08■□□□□ 0.64
RFFL-211ENST00000584541 RNF34Q969K3 372 aa19.08■□□□□ 0.64
RFFL-211ENST00000584541 PGAP3Q96FM1 320 aaPredicted RBP19.08■□□□□ 0.64
RFFL-211ENST00000584541 ALS2CR12Q96Q35 445 aa19.08■□□□□ 0.64
RFFL-211ENST00000584541 CYP2S1Q96SQ9 504 aa19.08■□□□□ 0.64
RFFL-211ENST00000584541 RNF38Q9H0F5 515 aa19.08■□□□□ 0.64
RFFL-211ENST00000584541 KCND1Q9NSA2 647 aa19.08■□□□□ 0.64
RFFL-211ENST00000584541 GDE1Q9NZC3 331 aa19.08■□□□□ 0.64
RFFL-211ENST00000584541 COX16Q9P0S2 106 aa19.08■□□□□ 0.64
RFFL-211ENST00000584541 USTQ9Y2C2 406 aa19.08■□□□□ 0.64
RFFL-211ENST00000584541 TLR6Q9Y2C9 796 aa19.08■□□□□ 0.64
RFFL-211ENST00000584541 HBS1LQ9Y450 684 aaKnown RBP19.08■□□□□ 0.64
RFFL-211ENST00000584541 IRAK2O43187 625 aa19.07■□□□□ 0.64
RFFL-211ENST00000584541 BUB1BO60566 1050 aaPredicted RBP19.07■□□□□ 0.64
RFFL-211ENST00000584541 IGLV3-25P01717 112 aa19.07■□□□□ 0.64
RFFL-211ENST00000584541 MAN1A1P33908 653 aa19.07■□□□□ 0.64
RFFL-211ENST00000584541 SLC1A1P43005 524 aa19.07■□□□□ 0.64
RFFL-211ENST00000584541 TBX4P57082 545 aa19.07■□□□□ 0.64
RFFL-211ENST00000584541 SLC7A9P82251 487 aa19.07■□□□□ 0.64
RFFL-211ENST00000584541 ZNF252P-AS1Q0IIN9 211 aa19.07■□□□□ 0.64
RFFL-211ENST00000584541 TRIP4Q15650 581 aaPredicted RBP19.07■□□□□ 0.64
RFFL-211ENST00000584541 C11orf63Q6NUN7 778 aa19.07■□□□□ 0.64
RFFL-211ENST00000584541 NPAS3Q8IXF0 933 aa19.07■□□□□ 0.64
RFFL-211ENST00000584541 SUSD6Q92537 303 aa19.07■□□□□ 0.64
RFFL-211ENST00000584541 CENPIQ92674 756 aaPredicted RBP19.07■□□□□ 0.64
RFFL-211ENST00000584541 FGF13Q92913 245 aa19.07■□□□□ 0.64
RFFL-211ENST00000584541 POMKQ9H5K3 350 aa19.07■□□□□ 0.64
RFFL-211ENST00000584541 CDH7Q9ULB5 785 aa19.07■□□□□ 0.64
RFFL-211ENST00000584541 ZFP37Q9Y6Q3 630 aaPredicted RBP19.07■□□□□ 0.64
RFFL-211ENST00000584541 NRG2O14511 850 aaPredicted RBP19.06■□□□□ 0.64
RFFL-211ENST00000584541 MSI1O43347 362 aaKnown RBP19.06■□□□□ 0.64
RFFL-211ENST00000584541 MBTPS2O43462 519 aa19.06■□□□□ 0.64
RFFL-211ENST00000584541 ENDOD1O94919 500 aa19.06■□□□□ 0.64
RFFL-211ENST00000584541 SLC2A3P11169 496 aa19.06■□□□□ 0.64
RFFL-211ENST00000584541 TFE3P19532 575 aaPredicted RBP19.06■□□□□ 0.64
RFFL-211ENST00000584541 MSNP26038 577 aaKnown RBP19.06■□□□□ 0.64
RFFL-211ENST00000584541 GBP2P32456 591 aaPredicted RBP19.06■□□□□ 0.64
RFFL-211ENST00000584541 SSR1P43307 286 aaKnown RBP19.06■□□□□ 0.64
RFFL-211ENST00000584541 PITX1P78337 314 aaPredicted RBP19.06■□□□□ 0.64
RFFL-211ENST00000584541 HADHQ16836 314 aaKnown RBP19.06■□□□□ 0.64
RFFL-211ENST00000584541 DDX42Q86XP3 938 aaKnown RBP eCLIP19.06■□□□□ 0.64
RFFL-211ENST00000584541 ZSCAN18Q8TBC5 510 aaPredicted RBP19.06■□□□□ 0.64
RFFL-211ENST00000584541 PLD4Q96BZ4 506 aa19.06■□□□□ 0.64
RFFL-211ENST00000584541 SLC22A12Q96S37 553 aa19.06■□□□□ 0.64
RFFL-211ENST00000584541 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.06■□□□□ 0.64
RFFL-211ENST00000584541 FAM50BQ9Y247 325 aa19.06■□□□□ 0.64
RFFL-211ENST00000584541 CPQQ9Y646 472 aa19.06■□□□□ 0.64
RFFL-211ENST00000584541 GRXCR2A6NFK2 248 aa19.05■□□□□ 0.64
RFFL-211ENST00000584541 USP27XA6NNY8 438 aa19.05■□□□□ 0.64
RFFL-211ENST00000584541 SPOPO43791 374 aa19.05■□□□□ 0.64
RFFL-211ENST00000584541 KIF5CO60282 957 aa19.05■□□□□ 0.64
RFFL-211ENST00000584541 PALMO75781 387 aa19.05■□□□□ 0.64
RFFL-211ENST00000584541 APOEP02649 317 aa19.05■□□□□ 0.64
RFFL-211ENST00000584541 HMBSP08397 361 aa19.05■□□□□ 0.64
RFFL-211ENST00000584541 WEE1P30291 646 aa19.05■□□□□ 0.64
RFFL-211ENST00000584541 CCR1P32246 355 aa19.05■□□□□ 0.64
RFFL-211ENST00000584541 PCK1P35558 622 aa19.05■□□□□ 0.64
RFFL-211ENST00000584541 RING1Q06587 406 aa19.05■□□□□ 0.64
RFFL-211ENST00000584541 PUS10Q3MIT2 529 aaKnown RBP19.05■□□□□ 0.64
RFFL-211ENST00000584541 ARL13BQ3SXY8 428 aa19.05■□□□□ 0.64
RFFL-211ENST00000584541 LEXMQ3ZCV2 418 aa19.05■□□□□ 0.64
RFFL-211ENST00000584541 BRMS1LQ5PSV4 323 aa19.05■□□□□ 0.64
RFFL-211ENST00000584541 SH3PXD2AQ5TCZ1 1133 aa19.05■□□□□ 0.64
RFFL-211ENST00000584541 OTUD1Q5VV17 481 aaPredicted RBP19.05■□□□□ 0.64
RFFL-211ENST00000584541 NUGGCQ68CJ6 796 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms