RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 NME7Q9Y5B8 376 aa11.8□□□□□ -0.52
CCDC47-206ENST00000584112 CRYBG3Q68DQ2 2970 aa11.8□□□□□ -0.52
CCDC47-206ENST00000584112 C2orf78A6NCI8 922 aa11.79□□□□□ -0.52
CCDC47-206ENST00000584112 ARHGAP33O14559 1287 aa11.79□□□□□ -0.52
CCDC47-206ENST00000584112 DKK1O94907 266 aa11.79□□□□□ -0.52
CCDC47-206ENST00000584112 RTN3O95197 1032 aaPredicted RBP11.79□□□□□ -0.52
CCDC47-206ENST00000584112 VNN1O95497 513 aa11.79□□□□□ -0.52
CCDC47-206ENST00000584112 SERPINF2P08697 491 aa11.79□□□□□ -0.52
CCDC47-206ENST00000584112 PRR29P0C7W0 189 aa11.79□□□□□ -0.52
CCDC47-206ENST00000584112 KRT13P13646 458 aa11.79□□□□□ -0.52
CCDC47-206ENST00000584112 ARSAP15289 507 aa11.79□□□□□ -0.52
CCDC47-206ENST00000584112 DRD1P21728 446 aa11.79□□□□□ -0.52
CCDC47-206ENST00000584112 NR2F2P24468 414 aa11.79□□□□□ -0.52
CCDC47-206ENST00000584112 PIK3CAP42336 1068 aa11.79□□□□□ -0.52
CCDC47-206ENST00000584112 CLDN6P56747 220 aa11.79□□□□□ -0.52
CCDC47-206ENST00000584112 USP46P62068 366 aa11.79□□□□□ -0.52
CCDC47-206ENST00000584112 DLG4P78352 724 aa11.79□□□□□ -0.52
CCDC47-206ENST00000584112 ENPEPQ07075 957 aa11.79□□□□□ -0.52
CCDC47-206ENST00000584112 KCNH2Q12809 1159 aa11.79□□□□□ -0.52
CCDC47-206ENST00000584112 DUOXA1Q1HG43 343 aa11.79□□□□□ -0.52
CCDC47-206ENST00000584112 ZACNQ401N2 412 aa11.79□□□□□ -0.52
CCDC47-206ENST00000584112 CCDC157Q569K6 752 aa11.79□□□□□ -0.52
CCDC47-206ENST00000584112 NAIF1Q69YI7 327 aaPredicted RBP11.79□□□□□ -0.52
CCDC47-206ENST00000584112 ANO7Q6IWH7 933 aa11.79□□□□□ -0.52
CCDC47-206ENST00000584112 SCARA5Q6ZMJ2 495 aa11.79□□□□□ -0.52
CCDC47-206ENST00000584112 INTS8Q75QN2 995 aaKnown RBP11.79□□□□□ -0.52
CCDC47-206ENST00000584112 GUF1Q8N442 669 aaKnown RBP11.79□□□□□ -0.52
CCDC47-206ENST00000584112 DEFB119Q8N690 84 aa11.79□□□□□ -0.52
CCDC47-206ENST00000584112 KIAA1958Q8N8K9 716 aa11.79□□□□□ -0.52
CCDC47-206ENST00000584112 TTC16Q8NEE8 873 aa11.79□□□□□ -0.52
CCDC47-206ENST00000584112 PDZD8Q8NEN9 1154 aa11.79□□□□□ -0.52
CCDC47-206ENST00000584112 RIN3Q8TB24 985 aa11.79□□□□□ -0.52
CCDC47-206ENST00000584112 BAP1Q92560 729 aa11.79□□□□□ -0.52
CCDC47-206ENST00000584112 CHFRQ96EP1 664 aa11.79□□□□□ -0.52
CCDC47-206ENST00000584112 SMARCD1Q96GM5 515 aa11.79□□□□□ -0.52
CCDC47-206ENST00000584112 SLC22A12Q96S37 553 aa11.79□□□□□ -0.52
CCDC47-206ENST00000584112 MED10Q9BTT4 135 aa11.79□□□□□ -0.52
CCDC47-206ENST00000584112 B3GNT5Q9BYG0 378 aa11.79□□□□□ -0.52
CCDC47-206ENST00000584112 IMPG2Q9BZV3 1241 aa11.79□□□□□ -0.52
CCDC47-206ENST00000584112 ZNF518BQ9C0D4 1074 aa11.79□□□□□ -0.52
CCDC47-206ENST00000584112 ECT2Q9H8V3 914 aa11.79□□□□□ -0.52
CCDC47-206ENST00000584112 OTOGQ6ZRI0 2925 aa11.78□□□□□ -0.52
CCDC47-206ENST00000584112 ZNF840PA6NDX5 716 aa11.78□□□□□ -0.52
CCDC47-206ENST00000584112 OTOL1A6NHN0 477 aaPredicted RBP11.78□□□□□ -0.52
CCDC47-206ENST00000584112 CLDN5O00501 218 aa11.78□□□□□ -0.52
CCDC47-206ENST00000584112 ZNF202O95125 648 aa11.78□□□□□ -0.52
CCDC47-206ENST00000584112 NFATC1O95644 943 aa11.78□□□□□ -0.52
CCDC47-206ENST00000584112 GJA4P35212 333 aa11.78□□□□□ -0.52
CCDC47-206ENST00000584112 PSMC2P35998 433 aaKnown RBP11.78□□□□□ -0.52
CCDC47-206ENST00000584112 VAMP7P51809 220 aa11.78□□□□□ -0.52
CCDC47-206ENST00000584112 CDH8P55286 799 aa11.78□□□□□ -0.52
CCDC47-206ENST00000584112 TAF10Q12962 218 aa11.78□□□□□ -0.52
CCDC47-206ENST00000584112 SLC14A1Q13336 389 aa11.78□□□□□ -0.52
CCDC47-206ENST00000584112 FBXO43Q4G163 708 aa11.78□□□□□ -0.52
CCDC47-206ENST00000584112 LYSMD4Q5XG99 296 aa11.78□□□□□ -0.52
CCDC47-206ENST00000584112 SV2AQ7L0J3 742 aa11.78□□□□□ -0.52
CCDC47-206ENST00000584112 SYT13Q7L8C5 426 aa11.78□□□□□ -0.52
CCDC47-206ENST00000584112 FAM35AQ86V20 835 aa11.78□□□□□ -0.52
CCDC47-206ENST00000584112 UNC93AQ86WB7 457 aa11.78□□□□□ -0.52
CCDC47-206ENST00000584112 DDX42Q86XP3 938 aaKnown RBP eCLIP11.78□□□□□ -0.52
CCDC47-206ENST00000584112 NUP93Q8N1F7 819 aa11.78□□□□□ -0.52
CCDC47-206ENST00000584112 CCDC150Q8NCX0 1101 aa11.78□□□□□ -0.52
CCDC47-206ENST00000584112 TSTD1Q8NFU3 115 aa11.78□□□□□ -0.52
CCDC47-206ENST00000584112 SETD7Q8WTS6 366 aaKnown RBP11.78□□□□□ -0.52
CCDC47-206ENST00000584112 OVCA2Q8WZ82 227 aa11.78□□□□□ -0.52
CCDC47-206ENST00000584112 NXPE2Q96DL1 559 aa11.78□□□□□ -0.52
CCDC47-206ENST00000584112 P2RY13Q9BPV8 354 aa11.78□□□□□ -0.52
CCDC47-206ENST00000584112 DNAI2Q9GZS0 605 aa11.78□□□□□ -0.52
CCDC47-206ENST00000584112 GOLPH3LQ9H4A5 285 aa11.78□□□□□ -0.52
CCDC47-206ENST00000584112 DMAP1Q9NPF5 467 aaPredicted RBP11.78□□□□□ -0.52
CCDC47-206ENST00000584112 WNT6Q9Y6F9 365 aa11.78□□□□□ -0.52
CCDC47-206ENST00000584112 AK5Q9Y6K8 562 aa11.78□□□□□ -0.52
CCDC47-206ENST00000584112 PLXND1Q9Y4D7 1925 aa11.78□□□□□ -0.52
CCDC47-206ENST00000584112 BLACEA4D250 179 aa11.77□□□□□ -0.53
CCDC47-206ENST00000584112 GOLGA6L4A6NEF3 574 aa11.77□□□□□ -0.53
CCDC47-206ENST00000584112 LEFTY2O00292 366 aa11.77□□□□□ -0.53
CCDC47-206ENST00000584112 SLC9A3R1O14745 358 aaPredicted RBP11.77□□□□□ -0.53
CCDC47-206ENST00000584112 OLFM2O95897 454 aa11.77□□□□□ -0.53
CCDC47-206ENST00000584112 ABL1P00519 1130 aa11.77□□□□□ -0.53
CCDC47-206ENST00000584112 ASS1P00966 412 aaKnown RBP11.77□□□□□ -0.53
CCDC47-206ENST00000584112 HLA-DRAP01903 254 aa11.77□□□□□ -0.53
CCDC47-206ENST00000584112 YWHAQP27348 245 aa11.77□□□□□ -0.53
CCDC47-206ENST00000584112 CACNA2D1P54289 1103 aa11.77□□□□□ -0.53
CCDC47-206ENST00000584112 SLC7A9P82251 487 aa11.77□□□□□ -0.53
CCDC47-206ENST00000584112 IFRD2Q12894 506 aaPredicted RBP11.77□□□□□ -0.53
CCDC47-206ENST00000584112 EML3Q32P44 896 aa11.77□□□□□ -0.53
CCDC47-206ENST00000584112 PREPLQ4J6C6 727 aaPredicted RBP11.77□□□□□ -0.53
CCDC47-206ENST00000584112 PEAR1Q5VY43 1037 aaPredicted RBP11.77□□□□□ -0.53
CCDC47-206ENST00000584112 TTC30AQ86WT1 665 aa11.77□□□□□ -0.53
CCDC47-206ENST00000584112 FAM186BQ8IYM0 893 aa11.77□□□□□ -0.53
CCDC47-206ENST00000584112 CCDC26Q8TAB7 109 aa11.77□□□□□ -0.53
CCDC47-206ENST00000584112 SNIP1Q8TAD8 396 aaKnown RBP11.77□□□□□ -0.53
CCDC47-206ENST00000584112 CD101Q93033 1021 aa11.77□□□□□ -0.53
CCDC47-206ENST00000584112 FBXO32Q969P5 355 aa11.77□□□□□ -0.53
CCDC47-206ENST00000584112 ZNF768Q9H5H4 540 aaKnown RBP11.77□□□□□ -0.53
CCDC47-206ENST00000584112 TMEM30AQ9NV96 361 aa11.77□□□□□ -0.53
CCDC47-206ENST00000584112 RMND1Q9NWS8 449 aa11.77□□□□□ -0.53
CCDC47-206ENST00000584112 COMMD8Q9NX08 183 aa11.77□□□□□ -0.53
CCDC47-206ENST00000584112 MYLKQ15746 1914 aa11.76□□□□□ -0.53
CCDC47-206ENST00000584112 KNL1Q8NG31 2342 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms