RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 CMTM8Q8IZV2 173 aa12.16□□□□□ -0.46
CDRT1-207ENST00000583965 C17orf53Q8N3J3 647 aaPredicted RBP12.16□□□□□ -0.46
CDRT1-207ENST00000583965 ITFG1Q8TB96 612 aa12.16□□□□□ -0.46
CDRT1-207ENST00000583965 CENPIQ92674 756 aaPredicted RBP12.16□□□□□ -0.46
CDRT1-207ENST00000583965 CFAP57Q96MR6 1250 aa12.16□□□□□ -0.46
CDRT1-207ENST00000583965 SLC46A2Q9BY10 475 aa12.16□□□□□ -0.46
CDRT1-207ENST00000583965 SLITRK6Q9H5Y7 841 aa12.16□□□□□ -0.46
CDRT1-207ENST00000583965 OSGEPQ9NPF4 335 aa12.16□□□□□ -0.46
CDRT1-207ENST00000583965 MARCH2Q9P0N8 246 aa12.16□□□□□ -0.46
CDRT1-207ENST00000583965 CDH7Q9ULB5 785 aa12.16□□□□□ -0.46
CDRT1-207ENST00000583965 TFR2Q9UP52 801 aa12.16□□□□□ -0.46
CDRT1-207ENST00000583965 FAM50BQ9Y247 325 aa12.16□□□□□ -0.46
CDRT1-207ENST00000583965 HBS1LQ9Y450 684 aaKnown RBP12.16□□□□□ -0.46
CDRT1-207ENST00000583965 PAXBP1Q9Y5B6 917 aa12.16□□□□□ -0.46
CDRT1-207ENST00000583965 M0QYT0 321 aa12.15□□□□□ -0.46
CDRT1-207ENST00000583965 KIF2AO00139 706 aaPredicted RBP12.15□□□□□ -0.46
CDRT1-207ENST00000583965 IRAK2O43187 625 aa12.15□□□□□ -0.46
CDRT1-207ENST00000583965 RNF8O76064 485 aa12.15□□□□□ -0.46
CDRT1-207ENST00000583965 TRUB2O95900 331 aaKnown RBP12.15□□□□□ -0.46
CDRT1-207ENST00000583965 CKMP06732 381 aa12.15□□□□□ -0.46
CDRT1-207ENST00000583965 MBL2P11226 248 aaPredicted RBP12.15□□□□□ -0.46
CDRT1-207ENST00000583965 AVPR1AP37288 418 aa12.15□□□□□ -0.46
CDRT1-207ENST00000583965 SULT1E1P49888 294 aa12.15□□□□□ -0.46
CDRT1-207ENST00000583965 NAP1L1P55209 391 aaKnown RBP12.15□□□□□ -0.46
CDRT1-207ENST00000583965 OGDHQ02218 1023 aa12.15□□□□□ -0.46
CDRT1-207ENST00000583965 ZNF252P-AS1Q0IIN9 211 aa12.15□□□□□ -0.46
CDRT1-207ENST00000583965 EFEMP1Q12805 493 aa12.15□□□□□ -0.46
CDRT1-207ENST00000583965 MTA1Q13330 715 aa12.15□□□□□ -0.46
CDRT1-207ENST00000583965 EIF4EBP2Q13542 120 aaPredicted RBP12.15□□□□□ -0.46
CDRT1-207ENST00000583965 TRIP4Q15650 581 aaPredicted RBP12.15□□□□□ -0.46
CDRT1-207ENST00000583965 NYAP1Q6ZVC0 841 aa12.15□□□□□ -0.46
CDRT1-207ENST00000583965 SND1Q7KZF4 910 aaKnown RBP eCLIP12.15□□□□□ -0.46
CDRT1-207ENST00000583965 GET4Q7L5D6 327 aaPredicted RBP12.15□□□□□ -0.46
CDRT1-207ENST00000583965 BNIPLQ7Z465 357 aa12.15□□□□□ -0.46
CDRT1-207ENST00000583965 TAC4Q86UU9 113 aa12.15□□□□□ -0.46
CDRT1-207ENST00000583965 DDX42Q86XP3 938 aaKnown RBP eCLIP12.15□□□□□ -0.46
CDRT1-207ENST00000583965 REXO1L1PQ8IX06 675 aa12.15□□□□□ -0.46
CDRT1-207ENST00000583965 NPAS3Q8IXF0 933 aa12.15□□□□□ -0.46
CDRT1-207ENST00000583965 ARL14EPQ8N8R7 260 aaPredicted RBP12.15□□□□□ -0.46
CDRT1-207ENST00000583965 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.15□□□□□ -0.46
CDRT1-207ENST00000583965 UBE2Q2Q8WVN8 375 aa12.15□□□□□ -0.46
CDRT1-207ENST00000583965 ING5Q8WYH8 240 aa12.15□□□□□ -0.46
CDRT1-207ENST00000583965 FGF13Q92913 245 aa12.15□□□□□ -0.46
CDRT1-207ENST00000583965 TBCBQ99426 244 aa12.15□□□□□ -0.46
CDRT1-207ENST00000583965 TRIM7Q9C029 511 aa12.15□□□□□ -0.46
CDRT1-207ENST00000583965 RNF38Q9H0F5 515 aa12.15□□□□□ -0.46
CDRT1-207ENST00000583965 POMKQ9H5K3 350 aa12.15□□□□□ -0.46
CDRT1-207ENST00000583965 FAM204AQ9H8W3 233 aa12.15□□□□□ -0.46
CDRT1-207ENST00000583965 KIF9Q9HAQ2 790 aa12.15□□□□□ -0.46
CDRT1-207ENST00000583965 LZTFL1Q9NQ48 299 aa12.15□□□□□ -0.46
CDRT1-207ENST00000583965 DDIT4Q9NX09 232 aa12.15□□□□□ -0.46
CDRT1-207ENST00000583965 RASAL2Q9UJF2 1139 aa12.15□□□□□ -0.46
CDRT1-207ENST00000583965 NUDT5Q9UKK9 219 aa12.15□□□□□ -0.46
CDRT1-207ENST00000583965 ARHGAP26Q9UNA1 814 aa12.15□□□□□ -0.46
CDRT1-207ENST00000583965 USTQ9Y2C2 406 aa12.15□□□□□ -0.46
CDRT1-207ENST00000583965 TLR6Q9Y2C9 796 aa12.15□□□□□ -0.46
CDRT1-207ENST00000583965 DUSP10Q9Y6W6 482 aa12.15□□□□□ -0.46
CDRT1-207ENST00000583965 A0A0U1RQJ8 604 aa12.14□□□□□ -0.47
CDRT1-207ENST00000583965 MACROD2A1Z1Q3 448 aa12.14□□□□□ -0.47
CDRT1-207ENST00000583965 GRXCR2A6NFK2 248 aa12.14□□□□□ -0.47
CDRT1-207ENST00000583965 USP27XA6NNY8 438 aa12.14□□□□□ -0.47
CDRT1-207ENST00000583965 NRG2O14511 850 aaPredicted RBP12.14□□□□□ -0.47
CDRT1-207ENST00000583965 PROSCO94903 275 aa12.14□□□□□ -0.47
CDRT1-207ENST00000583965 TBX18O95935 607 aa12.14□□□□□ -0.47
CDRT1-207ENST00000583965 SLC2A3P11169 496 aa12.14□□□□□ -0.47
CDRT1-207ENST00000583965 TCF3P15923 654 aa12.14□□□□□ -0.47
CDRT1-207ENST00000583965 RDXP35241 583 aaKnown RBP12.14□□□□□ -0.47
CDRT1-207ENST00000583965 ATP11AP98196 1134 aa12.14□□□□□ -0.47
CDRT1-207ENST00000583965 DEUP1Q05D60 604 aa12.14□□□□□ -0.47
CDRT1-207ENST00000583965 RING1Q06587 406 aa12.14□□□□□ -0.47
CDRT1-207ENST00000583965 MESDQ14696 234 aa12.14□□□□□ -0.47
CDRT1-207ENST00000583965 C15orf59Q2T9L4 293 aaPredicted RBP12.14□□□□□ -0.47
CDRT1-207ENST00000583965 BRMS1LQ5PSV4 323 aa12.14□□□□□ -0.47
CDRT1-207ENST00000583965 STXBP5Q5T5C0 1151 aa12.14□□□□□ -0.47
CDRT1-207ENST00000583965 C11orf63Q6NUN7 778 aa12.14□□□□□ -0.47
CDRT1-207ENST00000583965 OTOP3Q7RTS5 596 aa12.14□□□□□ -0.47
CDRT1-207ENST00000583965 UNC45BQ8IWX7 931 aa12.14□□□□□ -0.47
CDRT1-207ENST00000583965 KIAA1958Q8N8K9 716 aa12.14□□□□□ -0.47
CDRT1-207ENST00000583965 TPCN2Q8NHX9 752 aa12.14□□□□□ -0.47
CDRT1-207ENST00000583965 FAM172AQ8WUF8 416 aa12.14□□□□□ -0.47
CDRT1-207ENST00000583965 ATRIPQ8WXE1 791 aa12.14□□□□□ -0.47
CDRT1-207ENST00000583965 PLD4Q96BZ4 506 aa12.14□□□□□ -0.47
CDRT1-207ENST00000583965 SLC22A12Q96S37 553 aa12.14□□□□□ -0.47
CDRT1-207ENST00000583965 CYP2S1Q96SQ9 504 aa12.14□□□□□ -0.47
CDRT1-207ENST00000583965 KLF16Q9BXK1 252 aaPredicted RBP12.14□□□□□ -0.47
CDRT1-207ENST00000583965 TRPV4Q9HBA0 871 aa12.14□□□□□ -0.47
CDRT1-207ENST00000583965 TDP1Q9NUW8 608 aa12.14□□□□□ -0.47
CDRT1-207ENST00000583965 TRIM10Q9UDY6 481 aa12.14□□□□□ -0.47
CDRT1-207ENST00000583965 SFMBT1Q9UHJ3 866 aa12.14□□□□□ -0.47
CDRT1-207ENST00000583965 CDH22Q9UJ99 828 aa12.14□□□□□ -0.47
CDRT1-207ENST00000583965 SALL4Q9UJQ4 1053 aa12.14□□□□□ -0.47
CDRT1-207ENST00000583965 GUCA1BQ9UMX6 200 aa12.14□□□□□ -0.47
CDRT1-207ENST00000583965 SLC12A8A0AV02 714 aa12.13□□□□□ -0.47
CDRT1-207ENST00000583965 MDM4O15151 490 aa12.13□□□□□ -0.47
CDRT1-207ENST00000583965 BUB1O43683 1085 aa12.13□□□□□ -0.47
CDRT1-207ENST00000583965 BUB1BO60566 1050 aaPredicted RBP12.13□□□□□ -0.47
CDRT1-207ENST00000583965 IGLV3-27P01718 113 aa12.13□□□□□ -0.47
CDRT1-207ENST00000583965 TFE3P19532 575 aaPredicted RBP12.13□□□□□ -0.47
CDRT1-207ENST00000583965 CCR1P32246 355 aa12.13□□□□□ -0.47
CDRT1-207ENST00000583965 PCK1P35558 622 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms