RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 BRWD1Q9NSI6 2320 aa11.43□□□□□ -0.58
TOP3A-216ENST00000583804 C2orf16Q68DN1 1984 aa11.43□□□□□ -0.58
TOP3A-216ENST00000583804 SYNJ2BP-COX16A0A087WUM0 186 aa11.43□□□□□ -0.58
TOP3A-216ENST00000583804 TCRBV5S1A1TA0A578 114 aa11.43□□□□□ -0.58
TOP3A-216ENST00000583804 RIOK3O14730 519 aaKnown RBP11.43□□□□□ -0.58
TOP3A-216ENST00000583804 BUB1BO60566 1050 aaPredicted RBP11.43□□□□□ -0.58
TOP3A-216ENST00000583804 MBL2P11226 248 aaPredicted RBP11.43□□□□□ -0.58
TOP3A-216ENST00000583804 NOS2P35228 1153 aa11.43□□□□□ -0.58
TOP3A-216ENST00000583804 FLT3P36888 993 aa11.43□□□□□ -0.58
TOP3A-216ENST00000583804 AVPR1AP37288 418 aa11.43□□□□□ -0.58
TOP3A-216ENST00000583804 MATKP42679 507 aa11.43□□□□□ -0.58
TOP3A-216ENST00000583804 SSR1P43307 286 aaKnown RBP11.43□□□□□ -0.58
TOP3A-216ENST00000583804 TUBP50607 506 aa11.43□□□□□ -0.58
TOP3A-216ENST00000583804 GSCP56915 257 aaPredicted RBP11.43□□□□□ -0.58
TOP3A-216ENST00000583804 OGDHQ02218 1023 aa11.43□□□□□ -0.58
TOP3A-216ENST00000583804 PUS10Q3MIT2 529 aaKnown RBP11.43□□□□□ -0.58
TOP3A-216ENST00000583804 BEND5Q7L4P6 421 aa11.43□□□□□ -0.58
TOP3A-216ENST00000583804 OTOP3Q7RTS5 596 aa11.43□□□□□ -0.58
TOP3A-216ENST00000583804 DAAM2Q86T65 1068 aa11.43□□□□□ -0.58
TOP3A-216ENST00000583804 CMTM8Q8IZV2 173 aa11.43□□□□□ -0.58
TOP3A-216ENST00000583804 TPCN2Q8NHX9 752 aa11.43□□□□□ -0.58
TOP3A-216ENST00000583804 ZSCAN18Q8TBC5 510 aaPredicted RBP11.43□□□□□ -0.58
TOP3A-216ENST00000583804 ALS2CR12Q96Q35 445 aa11.43□□□□□ -0.58
TOP3A-216ENST00000583804 SLC2A13Q96QE2 648 aa11.43□□□□□ -0.58
TOP3A-216ENST00000583804 MYADMQ96S97 322 aa11.43□□□□□ -0.58
TOP3A-216ENST00000583804 SMG9Q9H0W8 520 aaKnown RBP11.43□□□□□ -0.58
TOP3A-216ENST00000583804 OLA1Q9NTK5 396 aaKnown RBP11.43□□□□□ -0.58
TOP3A-216ENST00000583804 SMPD4Q9NXE4 827 aa11.43□□□□□ -0.58
TOP3A-216ENST00000583804 GDE1Q9NZC3 331 aa11.43□□□□□ -0.58
TOP3A-216ENST00000583804 MARCH2Q9P0N8 246 aa11.43□□□□□ -0.58
TOP3A-216ENST00000583804 COX16Q9P0S2 106 aa11.43□□□□□ -0.58
TOP3A-216ENST00000583804 SFMBT1Q9UHJ3 866 aa11.43□□□□□ -0.58
TOP3A-216ENST00000583804 CDH7Q9ULB5 785 aa11.43□□□□□ -0.58
TOP3A-216ENST00000583804 FAM50BQ9Y247 325 aa11.43□□□□□ -0.58
TOP3A-216ENST00000583804 ZNF638Q14966 1978 aaKnown RBP11.42□□□□□ -0.58
TOP3A-216ENST00000583804 MYO16Q9Y6X6 1858 aa11.42□□□□□ -0.58
TOP3A-216ENST00000583804 SLC12A8A0AV02 714 aa11.42□□□□□ -0.58
TOP3A-216ENST00000583804 SOBPA7XYQ1 873 aa11.42□□□□□ -0.58
TOP3A-216ENST00000583804 OAS1P00973 400 aaKnown RBP11.42□□□□□ -0.58
TOP3A-216ENST00000583804 ATP1A1P05023 1023 aaKnown RBP11.42□□□□□ -0.58
TOP3A-216ENST00000583804 GPD1P21695 349 aa11.42□□□□□ -0.58
TOP3A-216ENST00000583804 SDC4P31431 198 aa11.42□□□□□ -0.58
TOP3A-216ENST00000583804 SULT1E1P49888 294 aa11.42□□□□□ -0.58
TOP3A-216ENST00000583804 PPP1R15BQ5SWA1 713 aa11.42□□□□□ -0.58
TOP3A-216ENST00000583804 RHOT2Q8IXI1 618 aa11.42□□□□□ -0.58
TOP3A-216ENST00000583804 ST13P5Q8NFI4 369 aaPredicted RBP11.42□□□□□ -0.58
TOP3A-216ENST00000583804 DQX1Q8TE96 717 aaKnown RBP11.42□□□□□ -0.58
TOP3A-216ENST00000583804 ACSF2Q96CM8 615 aaPredicted RBP11.42□□□□□ -0.58
TOP3A-216ENST00000583804 RPGRIP1Q96KN7 1286 aa11.42□□□□□ -0.58
TOP3A-216ENST00000583804 CFAP57Q96MR6 1250 aa11.42□□□□□ -0.58
TOP3A-216ENST00000583804 DDX23Q9BUQ8 820 aaKnown RBP11.42□□□□□ -0.58
TOP3A-216ENST00000583804 FAM204AQ9H8W3 233 aa11.42□□□□□ -0.58
TOP3A-216ENST00000583804 GKN1Q9NS71 199 aa11.42□□□□□ -0.58
TOP3A-216ENST00000583804 THEGQ9P2T0 379 aa11.42□□□□□ -0.58
TOP3A-216ENST00000583804 ZMYM5Q9UJ78 669 aa11.42□□□□□ -0.58
TOP3A-216ENST00000583804 STAP1Q9ULZ2 295 aa11.42□□□□□ -0.58
TOP3A-216ENST00000583804 CPQQ9Y646 472 aa11.42□□□□□ -0.58
TOP3A-216ENST00000583804 NOTCH4Q99466 2003 aa11.42□□□□□ -0.58
TOP3A-216ENST00000583804 REV3LO60673 3130 aa11.42□□□□□ -0.58
TOP3A-216ENST00000583804 TMEM191CA6NGB0 347 aa11.41□□□□□ -0.58
TOP3A-216ENST00000583804 C2CD4BA6NLJ0 364 aa11.41□□□□□ -0.58
TOP3A-216ENST00000583804 M0QYT0 321 aa11.41□□□□□ -0.58
TOP3A-216ENST00000583804 MSI1O43347 362 aaKnown RBP11.41□□□□□ -0.58
TOP3A-216ENST00000583804 TRUB2O95900 331 aaKnown RBP11.41□□□□□ -0.58
TOP3A-216ENST00000583804 HMBSP08397 361 aa11.41□□□□□ -0.58
TOP3A-216ENST00000583804 LAMP2P13473 410 aa11.41□□□□□ -0.58
TOP3A-216ENST00000583804 PFKLP17858 780 aa11.41□□□□□ -0.58
TOP3A-216ENST00000583804 PSMA2P25787 234 aa11.41□□□□□ -0.58
TOP3A-216ENST00000583804 CASQ1P31415 396 aa11.41□□□□□ -0.58
TOP3A-216ENST00000583804 GBP1P32455 592 aa11.41□□□□□ -0.58
TOP3A-216ENST00000583804 PITX1P78337 314 aaPredicted RBP11.41□□□□□ -0.58
TOP3A-216ENST00000583804 ATP11AP98196 1134 aa11.41□□□□□ -0.58
TOP3A-216ENST00000583804 NME3Q13232 169 aa11.41□□□□□ -0.58
TOP3A-216ENST00000583804 SMAD2Q15796 467 aaKnown RBP11.41□□□□□ -0.58
TOP3A-216ENST00000583804 CDO1Q16878 200 aa11.41□□□□□ -0.58
TOP3A-216ENST00000583804 AAK1Q2M2I8 961 aa11.41□□□□□ -0.58
TOP3A-216ENST00000583804 C15orf59Q2T9L4 293 aaPredicted RBP11.41□□□□□ -0.58
TOP3A-216ENST00000583804 SLC25A52Q3SY17 297 aa11.41□□□□□ -0.58
TOP3A-216ENST00000583804 RAB6CQ53S08 254 aa11.41□□□□□ -0.58
TOP3A-216ENST00000583804 FAM78AQ5JUQ0 283 aa11.41□□□□□ -0.58
TOP3A-216ENST00000583804 TRNP1Q6NT89 227 aa11.41□□□□□ -0.58
TOP3A-216ENST00000583804 KLHDC10Q6PID8 442 aa11.41□□□□□ -0.58
TOP3A-216ENST00000583804 ZNF662Q6ZS27 426 aa11.41□□□□□ -0.58
TOP3A-216ENST00000583804 ARCQ7LC44 396 aa11.41□□□□□ -0.58
TOP3A-216ENST00000583804 TAC4Q86UU9 113 aa11.41□□□□□ -0.58
TOP3A-216ENST00000583804 ARID3BQ8IVW6 561 aaPredicted RBP11.41□□□□□ -0.58
TOP3A-216ENST00000583804 ZNF276Q8N554 614 aa11.41□□□□□ -0.58
TOP3A-216ENST00000583804 PHF7Q9BWX1 381 aaPredicted RBP11.41□□□□□ -0.58
TOP3A-216ENST00000583804 RAB6CQ9H0N0 254 aa11.41□□□□□ -0.58
TOP3A-216ENST00000583804 KLHL11Q9NVR0 708 aa11.41□□□□□ -0.58
TOP3A-216ENST00000583804 DDIT4Q9NX09 232 aa11.41□□□□□ -0.58
TOP3A-216ENST00000583804 RRN3Q9NYV6 651 aa11.41□□□□□ -0.58
TOP3A-216ENST00000583804 UVRAGQ9P2Y5 699 aa11.41□□□□□ -0.58
TOP3A-216ENST00000583804 COL6A3P12111 3177 aa11.4□□□□□ -0.58
TOP3A-216ENST00000583804 A0A0A6YYK5 440 aaPredicted RBP11.4□□□□□ -0.58
TOP3A-216ENST00000583804 BTNL10A8MVZ5 291 aa11.4□□□□□ -0.58
TOP3A-216ENST00000583804 MYO1FO00160 1098 aa11.4□□□□□ -0.58
TOP3A-216ENST00000583804 DPYSL4O14531 572 aa11.4□□□□□ -0.58
TOP3A-216ENST00000583804 SPOPO43791 374 aa11.4□□□□□ -0.58
TOP3A-216ENST00000583804 OLFM2O95897 454 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms